RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 FZD8Q9H461 694 aa19.16■□□□□ 0.66
TUBB3-211ENST00000556536 TMEM134Q9H6X4 195 aa19.16■□□□□ 0.66
TUBB3-211ENST00000556536 MTMR10Q9NXD2 777 aa19.16■□□□□ 0.66
TUBB3-211ENST00000556536 EVPLQ92817 2033 aa19.16■□□□□ 0.66
TUBB3-211ENST00000556536 TTLL13PA6NNM8 815 aa19.15■□□□□ 0.66
TUBB3-211ENST00000556536 K7ERI5 159 aa19.15■□□□□ 0.66
TUBB3-211ENST00000556536 B4GALT5O43286 388 aa19.15■□□□□ 0.66
TUBB3-211ENST00000556536 RPS6KA5O75582 802 aa19.15■□□□□ 0.66
TUBB3-211ENST00000556536 PRPF6O94906 941 aaKnown RBP19.15■□□□□ 0.66
TUBB3-211ENST00000556536 CD52P31358 61 aa19.15■□□□□ 0.66
TUBB3-211ENST00000556536 KCNA1Q09470 495 aa19.15■□□□□ 0.66
TUBB3-211ENST00000556536 TSHZ1Q6ZSZ6 1077 aa19.15■□□□□ 0.66
TUBB3-211ENST00000556536 KCNN1Q92952 543 aa19.15■□□□□ 0.66
TUBB3-211ENST00000556536 VWCEQ96DN2 955 aa19.15■□□□□ 0.66
TUBB3-211ENST00000556536 IKZF4Q9H2S9 585 aa19.15■□□□□ 0.66
TUBB3-211ENST00000556536 PRKAG2Q9UGJ0 569 aa19.15■□□□□ 0.66
TUBB3-211ENST00000556536 TBX20Q9UMR3 447 aa19.15■□□□□ 0.66
TUBB3-211ENST00000556536 PHLPP2Q6ZVD8 1323 aa19.15■□□□□ 0.66
TUBB3-211ENST00000556536 H0YCG3 227 aa19.14■□□□□ 0.65
TUBB3-211ENST00000556536 PRKCBP05771 671 aa19.14■□□□□ 0.65
TUBB3-211ENST00000556536 HOXD13P35453 343 aa19.14■□□□□ 0.65
TUBB3-211ENST00000556536 MAPK6Q16659 721 aa19.14■□□□□ 0.65
TUBB3-211ENST00000556536 ZNF658Q5TYW1 1059 aaPredicted RBP19.14■□□□□ 0.65
TUBB3-211ENST00000556536 MFSD5Q6N075 450 aa19.14■□□□□ 0.65
TUBB3-211ENST00000556536 CATSPER4Q7RTX7 472 aa19.14■□□□□ 0.65
TUBB3-211ENST00000556536 SCFD1Q8WVM8 642 aa19.14■□□□□ 0.65
TUBB3-211ENST00000556536 UBE2OQ9C0C9 1292 aaKnown RBP19.14■□□□□ 0.65
TUBB3-211ENST00000556536 ERVK-5Q9HDB9 667 aa19.14■□□□□ 0.65
TUBB3-211ENST00000556536 PRMT7Q9NVM4 692 aaPredicted RBP19.14■□□□□ 0.65
TUBB3-211ENST00000556536 PADI3Q9ULW8 664 aa19.14■□□□□ 0.65
TUBB3-211ENST00000556536 ST3GAL5Q9UNP4 418 aa19.14■□□□□ 0.65
TUBB3-211ENST00000556536 MAPK8IP1Q9UQF2 711 aa19.14■□□□□ 0.65
TUBB3-211ENST00000556536 PCDHB13Q9Y5F0 798 aa19.14■□□□□ 0.65
TUBB3-211ENST00000556536 SQORQ9Y6N5 450 aa19.14■□□□□ 0.65
TUBB3-211ENST00000556536 TSPAN1O60635 241 aa19.13■□□□□ 0.65
TUBB3-211ENST00000556536 CSF2RAP15509 400 aa19.13■□□□□ 0.65
TUBB3-211ENST00000556536 SFPQP23246 707 aaKnown RBP eCLIP19.13■□□□□ 0.65
TUBB3-211ENST00000556536 FAM187BQ17R55 369 aa19.13■□□□□ 0.65
TUBB3-211ENST00000556536 TCTN1Q2MV58 587 aa19.13■□□□□ 0.65
TUBB3-211ENST00000556536 L1TD1Q5T7N2 865 aaKnown RBP19.13■□□□□ 0.65
TUBB3-211ENST00000556536 PPP4R3CPQ6ZMV5 832 aa19.13■□□□□ 0.65
TUBB3-211ENST00000556536 DEFB128Q7Z7B8 93 aa19.13■□□□□ 0.65
TUBB3-211ENST00000556536 MAP4K3Q8IVH8 894 aa19.13■□□□□ 0.65
TUBB3-211ENST00000556536 USP38Q8NB14 1042 aa19.13■□□□□ 0.65
TUBB3-211ENST00000556536 ZNF507Q8TCN5 953 aa19.13■□□□□ 0.65
TUBB3-211ENST00000556536 BADQ92934 168 aa19.13■□□□□ 0.65
TUBB3-211ENST00000556536 ACKR2O00590 384 aa19.12■□□□□ 0.65
TUBB3-211ENST00000556536 EIF3DO15371 548 aaKnown RBP eCLIP19.12■□□□□ 0.65
TUBB3-211ENST00000556536 CXCL10P02778 98 aa19.12■□□□□ 0.65
TUBB3-211ENST00000556536 CD44P16070 742 aaKnown RBP19.12■□□□□ 0.65
TUBB3-211ENST00000556536 SCP2P22307 547 aa19.12■□□□□ 0.65
TUBB3-211ENST00000556536 NFX1Q12986 1120 aaKnown RBP19.12■□□□□ 0.65
TUBB3-211ENST00000556536 STRN3Q13033 797 aa19.12■□□□□ 0.65
TUBB3-211ENST00000556536 PAK2Q13177 524 aa19.12■□□□□ 0.65
TUBB3-211ENST00000556536 ALCAMQ13740 583 aa19.12■□□□□ 0.65
TUBB3-211ENST00000556536 BMT2Q1RMZ1 405 aa19.12■□□□□ 0.65
TUBB3-211ENST00000556536 NELFCDQ8IXH7 590 aa19.12■□□□□ 0.65
TUBB3-211ENST00000556536 TMEM199Q8N511 208 aa19.12■□□□□ 0.65
TUBB3-211ENST00000556536 TRIML1Q8N9V2 468 aa19.12■□□□□ 0.65
TUBB3-211ENST00000556536 HVCN1Q96D96 273 aa19.12■□□□□ 0.65
TUBB3-211ENST00000556536 CPB2Q96IY4 423 aa19.12■□□□□ 0.65
TUBB3-211ENST00000556536 ACCSQ96QU6 501 aa19.12■□□□□ 0.65
TUBB3-211ENST00000556536 TARS2Q9BW92 718 aaKnown RBP19.12■□□□□ 0.65
TUBB3-211ENST00000556536 TMX1Q9H3N1 280 aa19.12■□□□□ 0.65
TUBB3-211ENST00000556536 LAMA2P24043 3122 aaKnown RBP19.11■□□□□ 0.65
TUBB3-211ENST00000556536 ZMYM2Q9UBW7 1377 aa19.11■□□□□ 0.65
TUBB3-211ENST00000556536 CNTNAP2Q9UHC6 1331 aa19.11■□□□□ 0.65
TUBB3-211ENST00000556536 GPR182O15218 404 aa19.11■□□□□ 0.65
TUBB3-211ENST00000556536 ERLIN2O94905 339 aa19.11■□□□□ 0.65
TUBB3-211ENST00000556536 PARNO95453 639 aaKnown RBP19.11■□□□□ 0.65
TUBB3-211ENST00000556536 ARF4P18085 180 aaPredicted RBP19.11■□□□□ 0.65
TUBB3-211ENST00000556536 HOXA11P31270 313 aaPredicted RBP19.11■□□□□ 0.65
TUBB3-211ENST00000556536 RFC2P35250 354 aa19.11■□□□□ 0.65
TUBB3-211ENST00000556536 PRCPP42785 496 aa19.11■□□□□ 0.65
TUBB3-211ENST00000556536 PRPF4BQ13523 1007 aaKnown RBP19.11■□□□□ 0.65
TUBB3-211ENST00000556536 PLEKHG4Q58EX7 1191 aa19.11■□□□□ 0.65
TUBB3-211ENST00000556536 STXBP4Q6ZWJ1 553 aa19.11■□□□□ 0.65
TUBB3-211ENST00000556536 MYOCDQ8IZQ8 938 aa19.11■□□□□ 0.65
TUBB3-211ENST00000556536 DBF4BQ8NFT6 615 aa19.11■□□□□ 0.65
TUBB3-211ENST00000556536 PRIMPOLQ96LW4 560 aa19.11■□□□□ 0.65
TUBB3-211ENST00000556536 IFIH1Q9BYX4 1025 aaKnown RBP19.11■□□□□ 0.65
TUBB3-211ENST00000556536 AGPAT5Q9NUQ2 364 aa19.11■□□□□ 0.65
TUBB3-211ENST00000556536 SIP14410 1827 aa19.1■□□□□ 0.65
TUBB3-211ENST00000556536 SYCE3A1L190 88 aa19.1■□□□□ 0.65
TUBB3-211ENST00000556536 PPP1R3GB7ZBB8 358 aa19.1■□□□□ 0.65
TUBB3-211ENST00000556536 TISP43B9A030 160 aa19.1■□□□□ 0.65
TUBB3-211ENST00000556536 MGEA5O60502 916 aa19.1■□□□□ 0.65
TUBB3-211ENST00000556536 ABCD1P33897 745 aa19.1■□□□□ 0.65
TUBB3-211ENST00000556536 NLRP12P59046 1061 aa19.1■□□□□ 0.65
TUBB3-211ENST00000556536 PCBP1Q15365 356 aaKnown RBP eCLIP19.1■□□□□ 0.65
TUBB3-211ENST00000556536 ZSCAN23Q3MJ62 389 aa19.1■□□□□ 0.65
TUBB3-211ENST00000556536 SLC39A4Q6P5W5 647 aa19.1■□□□□ 0.65
TUBB3-211ENST00000556536 CDR2LQ86X02 465 aaPredicted RBP19.1■□□□□ 0.65
TUBB3-211ENST00000556536 ADSSL1Q8N142 457 aa19.1■□□□□ 0.65
TUBB3-211ENST00000556536 ACO2Q99798 780 aaKnown RBP19.1■□□□□ 0.65
TUBB3-211ENST00000556536 MRPL4Q9BYD3 311 aaKnown RBP19.1■□□□□ 0.65
TUBB3-211ENST00000556536 PIN4Q9Y237 131 aaKnown RBP19.1■□□□□ 0.65
TUBB3-211ENST00000556536 UBE4BO95155 1302 aa19.09■□□□□ 0.65
TUBB3-211ENST00000556536 ANKRD63C9JTQ0 380 aa19.09■□□□□ 0.65
TUBB3-211ENST00000556536 PIGRP01833 764 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms