RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 HVCN1Q96D96 273 aa11.18□□□□□ -0.62
SRP54-208ENST00000555557 ZBTB45Q96K62 511 aaPredicted RBP11.18□□□□□ -0.62
SRP54-208ENST00000555557 GLT1D1Q96MS3 346 aa11.18□□□□□ -0.62
SRP54-208ENST00000555557 CEP63Q96MT8 703 aa11.18□□□□□ -0.62
SRP54-208ENST00000555557 SCLT1Q96NL6 688 aa11.18□□□□□ -0.62
SRP54-208ENST00000555557 TARS2Q9BW92 718 aaKnown RBP11.18□□□□□ -0.62
SRP54-208ENST00000555557 CCDC113Q9H0I3 377 aa11.18□□□□□ -0.62
SRP54-208ENST00000555557 TMEM134Q9H6X4 195 aa11.18□□□□□ -0.62
SRP54-208ENST00000555557 INTS13Q9NVM9 706 aa11.18□□□□□ -0.62
SRP54-208ENST00000555557 LIMA1Q9UHB6 759 aaKnown RBP11.18□□□□□ -0.62
SRP54-208ENST00000555557 KAT6AQ92794 2004 aa11.18□□□□□ -0.62
SRP54-208ENST00000555557 GOLGA8IPA6NC78 632 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 MOXD2PA6NHM9 499 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 LRRC10BA6NIK2 292 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 GOLGA8JA6NMD2 632 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 TEX33O43247 280 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 B4GALT5O43286 388 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 GPR32O75388 356 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 FGFR1OPO95684 399 aaKnown RBP11.17□□□□□ -0.62
SRP54-208ENST00000555557 RPL13P26373 211 aaKnown RBP11.17□□□□□ -0.62
SRP54-208ENST00000555557 MTIF2P46199 727 aaKnown RBP11.17□□□□□ -0.62
SRP54-208ENST00000555557 LIG4P49917 911 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 COPB1P53618 953 aaKnown RBP11.17□□□□□ -0.62
SRP54-208ENST00000555557 MBTD1Q05BQ5 628 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 MAPK6Q16659 721 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 CCDC40Q4G0X9 1142 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 FBXO46Q6PJ61 603 aaPredicted RBP11.17□□□□□ -0.62
SRP54-208ENST00000555557 SPC24Q8NBT2 197 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 WNT8BQ93098 351 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 PKNOX2Q96KN3 472 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 CTAGE1Q96RT6 745 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 TUBGCP2Q9BSJ2 902 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 DMAC2Q9NW81 257 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 SCN10AQ9Y5Y9 1956 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 A0A1W2PQ45 241 aaPredicted RBP11.17□□□□□ -0.62
SRP54-208ENST00000555557 A0A1W2PQY0 241 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 TULP1O00294 542 aaPredicted RBP11.17□□□□□ -0.62
SRP54-208ENST00000555557 PES1O00541 588 aaKnown RBP11.17□□□□□ -0.62
SRP54-208ENST00000555557 N4BP3O15049 544 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 EXOC3O60645 756 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 CABYRO75952 493 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 PRKCBP05771 671 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 FGFR4P22455 802 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 EEF1GP26641 437 aaKnown RBP11.17□□□□□ -0.62
SRP54-208ENST00000555557 EFNA5P52803 228 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 SPAG1Q07617 926 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 CDR2LQ86X02 465 aaPredicted RBP11.17□□□□□ -0.62
SRP54-208ENST00000555557 FAM114A1Q8IWE2 563 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 ANKRD20A12PQ8NF67 263 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 GOLGA5Q8TBA6 731 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 POMGNT1Q8WZA1 660 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 SAAL1Q96ER3 474 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 OSMRQ99650 979 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 TSEN34Q9BSV6 310 aaKnown RBP11.17□□□□□ -0.62
SRP54-208ENST00000555557 C2orf40Q9H1Z8 148 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 ADAMTS10Q9H324 1103 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 FZD8Q9H461 694 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 STARD7Q9NQZ5 370 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 TRMT13Q9NUP7 481 aaKnown RBP11.17□□□□□ -0.62
SRP54-208ENST00000555557 HSPBP1Q9NZL4 362 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 PHLPP2Q6ZVD8 1323 aa11.17□□□□□ -0.62
SRP54-208ENST00000555557 A0A1B0GTH6 734 aa11.16□□□□□ -0.62
SRP54-208ENST00000555557 KBTBD13C9JR72 458 aa11.16□□□□□ -0.62
SRP54-208ENST00000555557 PHKA2P46019 1235 aa11.16□□□□□ -0.62
SRP54-208ENST00000555557 NR1I3Q14994 352 aa11.16□□□□□ -0.62
SRP54-208ENST00000555557 PTGISQ16647 500 aa11.16□□□□□ -0.62
SRP54-208ENST00000555557 NFIL3Q16649 462 aa11.16□□□□□ -0.62
SRP54-208ENST00000555557 KCNN1Q92952 543 aa11.16□□□□□ -0.62
SRP54-208ENST00000555557 ZNF333Q96JL9 665 aa11.16□□□□□ -0.62
SRP54-208ENST00000555557 NOC4LQ9BVI4 516 aaKnown RBP11.16□□□□□ -0.62
SRP54-208ENST00000555557 HAPLN2Q9GZV7 340 aa11.16□□□□□ -0.62
SRP54-208ENST00000555557 ANKFY1Q9P2R3 1169 aa11.16□□□□□ -0.62
SRP54-208ENST00000555557 TRIP12Q14669 1992 aaPredicted RBP11.16□□□□□ -0.62
SRP54-208ENST00000555557 GNA14O95837 355 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 EPB41P11171 864 aaKnown RBP11.15□□□□□ -0.62
SRP54-208ENST00000555557 ABCD1P33897 745 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 PSMC2P35998 433 aaKnown RBP11.15□□□□□ -0.62
SRP54-208ENST00000555557 POU5F1BQ06416 359 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 MIIPQ5JXC2 388 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 ZBTB33Q86T24 672 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 SESTD1Q86VW0 696 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 SLC9A9Q8IVB4 645 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 C12orf56Q8IXR9 622 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 DRC7Q8IY82 874 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 FAM186BQ8IYM0 893 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 TMEM40Q8WWA1 233 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 MRFAP1L1Q96HT8 127 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 PDLIM2Q96JY6 352 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 ACO2Q99798 780 aaKnown RBP11.15□□□□□ -0.62
SRP54-208ENST00000555557 MRPL4Q9BYD3 311 aaKnown RBP11.15□□□□□ -0.62
SRP54-208ENST00000555557 NFKBIZQ9BYH8 718 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 OGDHLQ9ULD0 1010 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 FRMD4BQ9Y2L6 1034 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 DNM1LO00429 736 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 ACKR2O00590 384 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 CBFA2T2O43439 604 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 PIGRP01833 764 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 CTSHP09668 335 aa11.15□□□□□ -0.62
SRP54-208ENST00000555557 HARSP12081 509 aaKnown RBP11.15□□□□□ -0.62
SRP54-208ENST00000555557 SCP2P22307 547 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms