RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 KIAA1468Q9P260 1216 aa13.96□□□□□ -0.17
SYNE2-219ENST00000555323 TBX20Q9UMR3 447 aa13.96□□□□□ -0.17
SYNE2-219ENST00000555323 PCDHB13Q9Y5F0 798 aa13.96□□□□□ -0.17
SYNE2-219ENST00000555323 K7ENM7 598 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 EIF3DO15371 548 aaKnown RBP eCLIP13.95□□□□□ -0.18
SYNE2-219ENST00000555323 TSPAN1O60635 241 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 EFCAB14O75071 495 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 PIGRP01833 764 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 FGBP02675 491 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 PRKCBP05771 671 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 ACRP10323 421 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 FGFR4P22455 802 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 BMP8BP34820 402 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 MAGEA10P43363 369 aaPredicted RBP13.95□□□□□ -0.18
SYNE2-219ENST00000555323 NCBP1Q09161 790 aaKnown RBP13.95□□□□□ -0.18
SYNE2-219ENST00000555323 STK4Q13043 487 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 IKBKEQ14164 716 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 CAMK4Q16566 473 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 TCTN1Q2MV58 587 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 TMEM240Q5SV17 173 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 CATSPER4Q7RTX7 472 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 HPS3Q969F9 1004 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 SMARCE1Q969G3 411 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 GTPBP4Q9BZE4 634 aaKnown RBP13.95□□□□□ -0.18
SYNE2-219ENST00000555323 NUP62CLQ9H1M0 184 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 EXOC1Q9NV70 894 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 RMND1Q9NWS8 449 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 TBC1D7Q9P0N9 293 aa13.95□□□□□ -0.18
SYNE2-219ENST00000555323 CNTNAP2Q9UHC6 1331 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 ENPP3O14638 875 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 BAIAP3O94812 1187 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 ERLIN2O94905 339 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 GCNT3O95395 438 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 EDN1P05305 212 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 ZSCAN20P17040 1043 aaPredicted RBP13.94□□□□□ -0.18
SYNE2-219ENST00000555323 ARF4P18085 180 aaPredicted RBP13.94□□□□□ -0.18
SYNE2-219ENST00000555323 CASP5P51878 434 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 FAM189BP81408 668 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 STRN3Q13033 797 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 PRPF4BQ13523 1007 aaKnown RBP13.94□□□□□ -0.18
SYNE2-219ENST00000555323 BMT2Q1RMZ1 405 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 KLHL40Q2TBA0 621 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 ZC2HC1CQ53FD0 456 aaPredicted RBP13.94□□□□□ -0.18
SYNE2-219ENST00000555323 COBLL1Q53SF7 1204 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 PSRC1Q6PGN9 363 aaPredicted RBP13.94□□□□□ -0.18
SYNE2-219ENST00000555323 ZPBP2Q6X784 338 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 RBM43Q6ZSC3 357 aaKnown RBP13.94□□□□□ -0.18
SYNE2-219ENST00000555323 STXBP4Q6ZWJ1 553 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 ZNF365Q70YC5 407 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 MAP4K3Q8IVH8 894 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 KIAA0895Q8NCT3 520 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 HERVK_113Q902F9 699 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 ERCC4Q92889 916 aaPredicted RBP13.94□□□□□ -0.18
SYNE2-219ENST00000555323 CCDC51Q96ER9 411 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 ACO2Q99798 780 aaKnown RBP13.94□□□□□ -0.18
SYNE2-219ENST00000555323 MRPL4Q9BYD3 311 aaKnown RBP13.94□□□□□ -0.18
SYNE2-219ENST00000555323 FGFBP2Q9BYJ0 223 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 TANC1Q9C0D5 1861 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 TSPYL2Q9H2G4 693 aaPredicted RBP13.94□□□□□ -0.18
SYNE2-219ENST00000555323 PTPRHQ9HD43 1115 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 SLC39A2Q9NP94 309 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 RGS18Q9NS28 235 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 PCDH10Q9P2E7 1040 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 TNFSF13BQ9Y275 285 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 TET1Q8NFU7 2136 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 SIP14410 1827 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 LTBP2Q14767 1821 aa13.94□□□□□ -0.18
SYNE2-219ENST00000555323 TTLL13PA6NNM8 815 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 B4GALT5O43286 388 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 MGEA5O60502 916 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 ZNF623O75123 536 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 MYBP10242 640 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 ACTN1P12814 892 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 PROZP22891 400 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 HOXD13P35453 343 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 NFKBIBQ15653 356 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 SKOR2Q2VWA4 1001 aaPredicted RBP13.93□□□□□ -0.18
SYNE2-219ENST00000555323 L1TD1Q5T7N2 865 aaKnown RBP13.93□□□□□ -0.18
SYNE2-219ENST00000555323 ZNF658Q5TYW1 1059 aaPredicted RBP13.93□□□□□ -0.18
SYNE2-219ENST00000555323 RASIP1Q5U651 963 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 NOTUMQ6P988 496 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 CRIPAKQ8N1N5 446 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 TRIML1Q8N9V2 468 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 GLIS3Q8NEA6 775 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 SCFD1Q8WVM8 642 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 ADAM2Q99965 735 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.93□□□□□ -0.185e-6■■■□□ 16.3
SYNE2-219ENST00000555323 TMEM206Q9H813 350 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 C1orf112Q9NSG2 853 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 MAN1B1Q9UKM7 699 aa13.93□□□□□ -0.18
SYNE2-219ENST00000555323 UBE4BO95155 1302 aa13.92□□□□□ -0.18
SYNE2-219ENST00000555323 SCN5AQ14524 2016 aa13.92□□□□□ -0.18
SYNE2-219ENST00000555323 A0A0U1RQF3 1178 aa13.92□□□□□ -0.18
SYNE2-219ENST00000555323 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.92□□□□□ -0.18
SYNE2-219ENST00000555323 C9IYK1 514 aa13.92□□□□□ -0.18
SYNE2-219ENST00000555323 ABLIM1O14639 778 aa13.92□□□□□ -0.18
SYNE2-219ENST00000555323 PRPF6O94906 941 aaKnown RBP13.92□□□□□ -0.18
SYNE2-219ENST00000555323 SNRPFP62306 86 aaKnown RBP13.92□□□□□ -0.18
SYNE2-219ENST00000555323 KCNA1Q09470 495 aa13.92□□□□□ -0.18
SYNE2-219ENST00000555323 MORC3Q14149 939 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms