RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 BMT2Q1RMZ1 405 aa17.24■□□□□ 0.35
MARK3-209ENST00000555235 REEP2Q9BRK0 252 aa17.24■□□□□ 0.35
MARK3-209ENST00000555235 TYW1Q9NV66 732 aaKnown RBP17.24■□□□□ 0.35
MARK3-209ENST00000555235 MIF4GDA9UHW6 222 aaKnown RBP17.23■□□□□ 0.35
MARK3-209ENST00000555235 GJB6O95452 261 aa17.23■□□□□ 0.35
MARK3-209ENST00000555235 RPL21P46778 160 aaKnown RBP17.23■□□□□ 0.35
MARK3-209ENST00000555235 MIS18BP1Q6P0N0 1132 aa17.23■□□□□ 0.35
MARK3-209ENST00000555235 GLYCTKQ8IVS8 523 aa17.23■□□□□ 0.35
MARK3-209ENST00000555235 ZNF483Q8TF39 744 aaPredicted RBP17.23■□□□□ 0.35
MARK3-209ENST00000555235 RBM17Q96I25 401 aaKnown RBP17.23■□□□□ 0.35
MARK3-209ENST00000555235 RXFP1Q9HBX9 757 aa17.23■□□□□ 0.35
MARK3-209ENST00000555235 FGFR1OP2Q9NVK5 253 aa17.23■□□□□ 0.35
MARK3-209ENST00000555235 DNM3Q9UQ16 869 aa17.23■□□□□ 0.35
MARK3-209ENST00000555235 PCDHA1Q9Y5I3 950 aa17.23■□□□□ 0.35
MARK3-209ENST00000555235 TULP1O00294 542 aaPredicted RBP17.23■□□□□ 0.35
MARK3-209ENST00000555235 MEIS1O00470 390 aa17.23■□□□□ 0.35
MARK3-209ENST00000555235 GGPS1O95749 300 aa17.23■□□□□ 0.35
MARK3-209ENST00000555235 KRT16P08779 473 aa17.23■□□□□ 0.35
MARK3-209ENST00000555235 ABCB4P21439 1286 aa17.23■□□□□ 0.35
MARK3-209ENST00000555235 RPA1P27694 616 aa17.23■□□□□ 0.35
MARK3-209ENST00000555235 SKIV2L2P42285 1042 aaKnown RBP17.23■□□□□ 0.35
MARK3-209ENST00000555235 SLCO1A2P46721 670 aa17.23■□□□□ 0.35
MARK3-209ENST00000555235 PABPC4Q13310 644 aaKnown RBP eCLIP17.23■□□□□ 0.357e-6■□□□□ 8.5
MARK3-209ENST00000555235 UBL4BQ8N7F7 174 aa17.23■□□□□ 0.35
MARK3-209ENST00000555235 MICAL1Q8TDZ2 1067 aa17.23■□□□□ 0.35
MARK3-209ENST00000555235 C18orf8Q96DM3 657 aa17.23■□□□□ 0.35
MARK3-209ENST00000555235 TRIM7Q9C029 511 aa17.23■□□□□ 0.35
MARK3-209ENST00000555235 ASTN1O14525 1302 aa17.23■□□□□ 0.35
MARK3-209ENST00000555235 GREB1LQ9C091 1923 aaPredicted RBP17.22■□□□□ 0.35
MARK3-209ENST00000555235 TCP11X1B4DZS4 312 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 MEIS2O14770 477 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 BBOX1O75936 387 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 WFS1O76024 890 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 NR3C1P04150 777 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 FGFR4P22455 802 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 ZNF211Q13398 564 aaPredicted RBP17.22■□□□□ 0.35
MARK3-209ENST00000555235 MKRN4PQ13434 485 aaPredicted RBP17.22■□□□□ 0.35
MARK3-209ENST00000555235 BLMHQ13867 455 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 FAM182BQ5T319 152 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 ASRGL1Q7L266 308 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 SPATA21Q7Z572 469 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 EXOC3L1Q86VI1 746 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 RHOT2Q8IXI1 618 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 OLIG1Q8TAK6 271 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 ERMNQ8TAM6 284 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 P2RX7Q99572 595 aaKnown RBP17.22■□□□□ 0.35
MARK3-209ENST00000555235 STK33Q9BYT3 514 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 ANKRD62A6NC57 917 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 MPHOSPH10O00566 681 aaKnown RBP17.22■□□□□ 0.35
MARK3-209ENST00000555235 TBX3O15119 743 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 CASP4P49662 377 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 ARHGAP4P98171 946 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 MKRN3Q13064 507 aaKnown RBP17.22■□□□□ 0.35
MARK3-209ENST00000555235 AP3B2Q13367 1082 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 Q4G0T1 1027 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 ANKRD20A2Q5SQ80 823 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 ANKRD20A1Q5TYW2 823 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 ANKRD20A3Q5VUR7 823 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 GJB7Q6PEY0 223 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 TRMT10CQ7L0Y3 403 aaKnown RBP17.22■□□□□ 0.35
MARK3-209ENST00000555235 CYFIP1Q7L576 1253 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 ALG3Q92685 438 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 PRCCQ92733 491 aaPredicted RBP17.22■□□□□ 0.35
MARK3-209ENST00000555235 USP40Q9NVE5 1235 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 SUGT1Q9Y2Z0 365 aa17.22■□□□□ 0.35
MARK3-209ENST00000555235 IGSF9BQ9UPX0 1349 aa17.21■□□□□ 0.35
MARK3-209ENST00000555235 C6orf229H3BNL8 230 aa17.21■□□□□ 0.35
MARK3-209ENST00000555235 CTNNA2P26232 953 aa17.21■□□□□ 0.35
MARK3-209ENST00000555235 HADHBP55084 474 aaKnown RBP17.21■□□□□ 0.35
MARK3-209ENST00000555235 SARNPP82979 210 aaKnown RBP17.21■□□□□ 0.35
MARK3-209ENST00000555235 PRR16Q569H4 304 aa17.21■□□□□ 0.35
MARK3-209ENST00000555235 NUGGCQ68CJ6 796 aa17.21■□□□□ 0.35
MARK3-209ENST00000555235 ERICH1Q86X53 443 aa17.21■□□□□ 0.35
MARK3-209ENST00000555235 LENG9Q96B70 501 aa17.21■□□□□ 0.35
MARK3-209ENST00000555235 SERPINB12Q96P63 405 aa17.21■□□□□ 0.35
MARK3-209ENST00000555235 RAB3IPQ96QF0 476 aaPredicted RBP17.21■□□□□ 0.35
MARK3-209ENST00000555235 GGT7Q9UJ14 662 aa17.21■□□□□ 0.35
MARK3-209ENST00000555235 STK38LQ9Y2H1 464 aa17.21■□□□□ 0.35
MARK3-209ENST00000555235 C11orf63Q6NUN7 778 aa17.21■□□□□ 0.34
MARK3-209ENST00000555235 CCDC137Q6PK04 289 aaKnown RBP17.21■□□□□ 0.34
MARK3-209ENST00000555235 PRELID2Q8N945 189 aa17.21■□□□□ 0.34
MARK3-209ENST00000555235 UHMK1Q8TAS1 419 aaKnown RBP17.21■□□□□ 0.34
MARK3-209ENST00000555235 ART4Q93070 314 aa17.21■□□□□ 0.34
MARK3-209ENST00000555235 SH3GL3Q99963 347 aa17.21■□□□□ 0.34
MARK3-209ENST00000555235 SYT11Q9BT88 431 aa17.21■□□□□ 0.34
MARK3-209ENST00000555235 DBR1Q9UK59 544 aaKnown RBP17.21■□□□□ 0.34
MARK3-209ENST00000555235 PCDHA3Q9Y5H8 950 aa17.21■□□□□ 0.34
MARK3-209ENST00000555235 TAF1LQ8IZX4 1826 aa17.2■□□□□ 0.34
MARK3-209ENST00000555235 TMEM120BA0PK00 339 aa17.2■□□□□ 0.34
MARK3-209ENST00000555235 RSPH10B2B2RC85 870 aa17.2■□□□□ 0.34
MARK3-209ENST00000555235 RSPH10BP0C881 870 aa17.2■□□□□ 0.34
MARK3-209ENST00000555235 CCNB1P14635 433 aa17.2■□□□□ 0.34
MARK3-209ENST00000555235 LMNB2Q03252 620 aa17.2■□□□□ 0.34
MARK3-209ENST00000555235 CCDC38Q502W7 563 aa17.2■□□□□ 0.34
MARK3-209ENST00000555235 FAM196AQ6ZSG2 479 aa17.2■□□□□ 0.34
MARK3-209ENST00000555235 KIF2BQ8N4N8 673 aa17.2■□□□□ 0.34
MARK3-209ENST00000555235 CERS5Q8N5B7 392 aa17.2■□□□□ 0.34
MARK3-209ENST00000555235 TEX9Q8N6V9 391 aa17.2■□□□□ 0.34
MARK3-209ENST00000555235 ARHGEF2Q92974 986 aaKnown RBP17.2■□□□□ 0.34
MARK3-209ENST00000555235 BORCS6Q96GS4 357 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms