RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SRP68Q9UHB9 627 aaKnown RBP14.84□□□□□ -0.03
VTI1B-204ENST00000554659 UNC13BO14795 1591 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 UBE4BO95155 1302 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 SLC16A3O15427 465 aaKnown RBP14.84□□□□□ -0.03
VTI1B-204ENST00000554659 SFNP31947 248 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 GUCY1A2P33402 732 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 SLC18A3Q16572 532 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 TEDDM1Q5T9Z0 273 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 PASD1Q8IV76 773 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 GCOM2Q9BZD3 368 aaPredicted RBP14.84□□□□□ -0.03
VTI1B-204ENST00000554659 IRX2Q9BZI1 471 aaPredicted RBP14.84□□□□□ -0.03
VTI1B-204ENST00000554659 MLXIPLQ9NP71 852 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 ABCB11O95342 1321 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 PXDNLA1KZ92 1463 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 ZNF609O15014 1411 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 SLC16A4O15374 487 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 ARHGDIAP52565 204 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 ZNF699Q32M78 642 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.84□□□□□ -0.03
VTI1B-204ENST00000554659 AMACRQ9UHK6 382 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 FEM1BQ9UK73 627 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 TTC7AQ9ULT0 858 aaPredicted RBP14.84□□□□□ -0.03
VTI1B-204ENST00000554659 INPP5FQ9Y2H2 1132 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 EIF3HO15372 352 aaKnown RBP eCLIP14.84□□□□□ -0.03
VTI1B-204ENST00000554659 TDP2O95551 362 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 GPS1Q13098 491 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 STAT4Q14765 748 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 CCNI2Q6ZMN8 369 aaPredicted RBP14.84□□□□□ -0.03
VTI1B-204ENST00000554659 SYDE1Q6ZW31 735 aaPredicted RBP14.84□□□□□ -0.03
VTI1B-204ENST00000554659 FAM213AQ9BRX8 229 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 ZBTB12Q9Y330 459 aaPredicted RBP14.84□□□□□ -0.03
VTI1B-204ENST00000554659 COPS2P61201 443 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 TNFAIP2Q03169 654 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 SLC44A5Q8NCS7 719 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 NLRP4Q96MN2 994 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 CHP1Q99653 195 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 SUFUQ9UMX1 484 aa14.84□□□□□ -0.03
VTI1B-204ENST00000554659 GOLGA8MH3BSY2 632 aa14.83□□□□□ -0.03
VTI1B-204ENST00000554659 PCYT1AP49585 367 aa14.83□□□□□ -0.03
VTI1B-204ENST00000554659 PDIA2Q13087 525 aaKnown RBP14.83□□□□□ -0.03
VTI1B-204ENST00000554659 ATG9AQ7Z3C6 839 aa14.83□□□□□ -0.03
VTI1B-204ENST00000554659 TC2NQ8N9U0 490 aa14.83□□□□□ -0.03
VTI1B-204ENST00000554659 PARD3BQ8TEW8 1205 aa14.83□□□□□ -0.03
VTI1B-204ENST00000554659 ZNF341Q9BYN7 854 aa14.83□□□□□ -0.03
VTI1B-204ENST00000554659 AP5M1Q9H0R1 490 aa14.83□□□□□ -0.03
VTI1B-204ENST00000554659 SMYD3Q9H7B4 428 aa14.83□□□□□ -0.03
VTI1B-204ENST00000554659 DCTN4Q9UJW0 460 aa14.83□□□□□ -0.03
VTI1B-204ENST00000554659 DENND3A2RUS2 1198 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 HNRNPCL2B2RXH8 293 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 HNRNPCL1O60812 293 aaKnown RBP14.83□□□□□ -0.04
VTI1B-204ENST00000554659 RHOBTB3O94955 611 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 NOP14P78316 857 aaKnown RBP14.83□□□□□ -0.04
VTI1B-204ENST00000554659 ZNF394Q53GI3 561 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 IZUMO3Q5VZ72 239 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 THNSL1Q8IYQ7 743 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 ZBED8Q8IZ13 594 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 SCG3Q8WXD2 468 aaKnown RBP14.83□□□□□ -0.04
VTI1B-204ENST00000554659 SUN2Q9UH99 717 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 MADDQ8WXG6 1647 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 EIF4E1BA6NMX2 242 aaKnown RBP14.83□□□□□ -0.04
VTI1B-204ENST00000554659 PMLP29590 882 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 CRKP46108 304 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 QARSP47897 775 aaKnown RBP14.83□□□□□ -0.04
VTI1B-204ENST00000554659 PAPOLAP51003 745 aaKnown RBP14.83□□□□□ -0.04
VTI1B-204ENST00000554659 LRRC14Q15048 493 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 OR6B3Q8NGW1 331 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 NEDD1Q8NHV4 660 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 NBPF3Q9H094 633 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 PSD3Q9NYI0 1048 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 KLHL8Q9P2G9 620 aaPredicted RBP14.83□□□□□ -0.04
VTI1B-204ENST00000554659 RPS6KA4O75676 772 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 XPAP23025 273 aaPredicted RBP14.83□□□□□ -0.04
VTI1B-204ENST00000554659 GNA15P30679 374 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 TRIM28Q13263 835 aaKnown RBP14.83□□□□□ -0.04
VTI1B-204ENST00000554659 RC3H1Q5TC82 1133 aaKnown RBP14.83□□□□□ -0.04
VTI1B-204ENST00000554659 ZNF746Q6NUN9 644 aaPredicted RBP14.83□□□□□ -0.04
VTI1B-204ENST00000554659 DPY19L2Q6NUT2 758 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 ADGRF4Q8IZF3 695 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 GIMAP8Q8ND71 665 aaPredicted RBP14.83□□□□□ -0.04
VTI1B-204ENST00000554659 RNF139Q8WU17 664 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 AGPAT1Q99943 283 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 C7orf25Q9BPX7 421 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 CD209Q9NNX6 404 aa14.83□□□□□ -0.04
VTI1B-204ENST00000554659 H3BRJ5 948 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 SNAP23O00161 211 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 PSMD14O00487 310 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 MAPK6Q16659 721 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 MIGA2Q7L4E1 593 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 PPM1NQ8N819 430 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 ZNF473Q8WTR7 871 aaKnown RBP14.82□□□□□ -0.04
VTI1B-204ENST00000554659 GPR101Q96P66 508 aaPredicted RBP14.82□□□□□ -0.04
VTI1B-204ENST00000554659 ING2Q9H160 280 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 NDE1Q9NXR1 346 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 ZNF185O15231 689 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 CCDC22O60826 627 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 SMARCA1P28370 1054 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 SLC1A1P43005 524 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 DYNC1I2Q13409 638 aaKnown RBP14.82□□□□□ -0.04
VTI1B-204ENST00000554659 NCAPHQ15003 741 aa14.82□□□□□ -0.04
VTI1B-204ENST00000554659 KIF19Q2TAC6 998 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms