RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 UBE2QL1A1L167 161 aa4.6□□□□□ -1.67
VRK1-202ENST00000553683 PHF2O75151 1096 aa4.6□□□□□ -1.67
VRK1-202ENST00000553683 IPO13O94829 963 aaKnown RBP4.6□□□□□ -1.67
VRK1-202ENST00000553683 PEX11BO96011 259 aa4.6□□□□□ -1.67
VRK1-202ENST00000553683 GYPEP15421 78 aa4.6□□□□□ -1.67
VRK1-202ENST00000553683 TRIM25Q14258 630 aaKnown RBP4.6□□□□□ -1.67
VRK1-202ENST00000553683 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.6□□□□□ -1.67
VRK1-202ENST00000553683 CCDC62Q6P9F0 684 aa4.6□□□□□ -1.67
VRK1-202ENST00000553683 FAM180AQ6UWF9 173 aa4.6□□□□□ -1.67
VRK1-202ENST00000553683 HTR3DQ70Z44 454 aa4.6□□□□□ -1.67
VRK1-202ENST00000553683 APBB1IPQ7Z5R6 666 aaPredicted RBP4.6□□□□□ -1.67
VRK1-202ENST00000553683 PIK3C3Q8NEB9 887 aa4.6□□□□□ -1.67
VRK1-202ENST00000553683 AHCYL2Q96HN2 611 aaKnown RBP4.6□□□□□ -1.67
VRK1-202ENST00000553683 KCTD10Q9H3F6 313 aa4.6□□□□□ -1.67
VRK1-202ENST00000553683 MS4A5Q9H3V2 200 aa4.6□□□□□ -1.67
VRK1-202ENST00000553683 CLCA2Q9UQC9 943 aa4.6□□□□□ -1.67
VRK1-202ENST00000553683 GIT1Q9Y2X7 761 aa4.6□□□□□ -1.67
VRK1-202ENST00000553683 LCHNA4D1U4 455 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 GOLGA8AA7E2F4 631 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 MFAP3LO75121 409 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 INSRRP14616 1297 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 TNFRSF1AP19438 455 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 HIBADHP31937 336 aaKnown RBP4.59□□□□□ -1.67
VRK1-202ENST00000553683 LGALS4P56470 323 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 TMPRSS15P98073 1019 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 CT83Q5H943 113 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 DCAF17Q5H9S7 520 aaPredicted RBP4.59□□□□□ -1.67
VRK1-202ENST00000553683 FKBP15Q5T1M5 1219 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 NAIF1Q69YI7 327 aaPredicted RBP4.59□□□□□ -1.67
VRK1-202ENST00000553683 ZNF662Q6ZS27 426 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 KCNK18Q7Z418 384 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 SGMS1Q86VZ5 419 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 ATL2Q8NHH9 583 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 SNX33Q8WV41 574 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 AUTS2Q8WXX7 1259 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 FATE1Q969F0 183 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 EAF2Q96CJ1 260 aaPredicted RBP4.59□□□□□ -1.67
VRK1-202ENST00000553683 BRINP2Q9C0B6 783 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 ATP8A1Q9Y2Q0 1164 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 SH3BP1Q9Y3L3 701 aa4.59□□□□□ -1.67
VRK1-202ENST00000553683 RPTORQ8N122 1335 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 TRIM75PA6NK02 468 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 MATN3O15232 486 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 HOXA3O43365 443 aaPredicted RBP4.58□□□□□ -1.68
VRK1-202ENST00000553683 CRHR1P34998 444 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 SLC5A3P53794 718 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 ERVK-21P61565 698 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 KRT85P78386 507 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 DUSP2Q05923 314 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 MGAT5Q09328 741 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 UBE3CQ15386 1083 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 MUM1Q2TAK8 710 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 MIIPQ5JXC2 388 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 SPTY2D1Q68D10 685 aaPredicted RBP4.58□□□□□ -1.68
VRK1-202ENST00000553683 BTNL9Q6UXG8 535 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 RNF207Q6ZRF8 634 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 DOK3Q7L591 496 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 GGNQ86UU5 652 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 GSPT2Q8IYD1 628 aaKnown RBP4.58□□□□□ -1.68
VRK1-202ENST00000553683 ZNF808Q8N4W9 903 aaPredicted RBP4.58□□□□□ -1.68
VRK1-202ENST00000553683 MDGA1Q8NFP4 955 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 SH3RF3Q8TEJ3 882 aaPredicted RBP4.58□□□□□ -1.68
VRK1-202ENST00000553683 ARL8AQ96BM9 186 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 ZNF512Q96ME7 567 aaPredicted RBP4.58□□□□□ -1.68
VRK1-202ENST00000553683 TLR9Q9NR96 1032 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 ING3Q9NXR8 418 aa4.58□□□□□ -1.68
VRK1-202ENST00000553683 WASHC2AQ641Q2 1341 aa4.57□□□□□ -1.68
VRK1-202ENST00000553683 CAPN14A8MX76 684 aa4.57□□□□□ -1.68
VRK1-202ENST00000553683 GOLGA6L6A8MZA4 724 aa4.57□□□□□ -1.68
VRK1-202ENST00000553683 ALG1L2C9J202 215 aa4.57□□□□□ -1.68
VRK1-202ENST00000553683 PRKD3O94806 890 aa4.57□□□□□ -1.68
VRK1-202ENST00000553683 CLEC2LP0C7M8 214 aa4.57□□□□□ -1.68
VRK1-202ENST00000553683 GZMKP49863 264 aa4.57□□□□□ -1.68
VRK1-202ENST00000553683 MRPL49Q13405 166 aaKnown RBP4.57□□□□□ -1.68
VRK1-202ENST00000553683 FOXE3Q13461 319 aa4.57□□□□□ -1.68
VRK1-202ENST00000553683 PUM1Q14671 1186 aaKnown RBP eCLIP4.57□□□□□ -1.68
VRK1-202ENST00000553683 ELAVL1Q15717 326 aaKnown RBP4.57□□□□□ -1.68
VRK1-202ENST00000553683 SPDYAQ5MJ70 313 aa4.57□□□□□ -1.68
VRK1-202ENST00000553683 PDZD4Q76G19 769 aaPredicted RBP4.57□□□□□ -1.68
VRK1-202ENST00000553683 DDX42Q86XP3 938 aaKnown RBP eCLIP4.57□□□□□ -1.68
VRK1-202ENST00000553683 TMPRSS6Q8IU80 811 aa4.57□□□□□ -1.68
VRK1-202ENST00000553683 ZCRB1Q8TBF4 217 aaKnown RBP4.57□□□□□ -1.68
VRK1-202ENST00000553683 IL17RAQ96F46 866 aa4.57□□□□□ -1.68
VRK1-202ENST00000553683 SLC5A4Q9NY91 659 aa4.57□□□□□ -1.68
VRK1-202ENST00000553683 SCOCQ9UIL1 159 aa4.57□□□□□ -1.68
VRK1-202ENST00000553683 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.57□□□□□ -1.68
VRK1-202ENST00000553683 TMEM127O75204 238 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 LPLP06858 475 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 GNAT2P19087 354 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 CTSSP25774 331 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 GPR3P46089 330 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 MAN2A2P49641 1150 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 KLF1Q13351 362 aaPredicted RBP4.56□□□□□ -1.68
VRK1-202ENST00000553683 ADRM1Q16186 407 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 CRIP3Q6Q6R5 217 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 LHFPL2Q6ZUX7 228 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 FAM83AQ86UY5 434 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 PALM2Q8IXS6 379 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 GLB1L3Q8NCI6 653 aaPredicted RBP4.56□□□□□ -1.68
VRK1-202ENST00000553683 GPR156Q8NFN8 814 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms