RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 SPTLC3Q9NUV7 552 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 USP36Q9P275 1121 aaKnown RBP5.02□□□□□ -1.61
PCNX4-206ENST00000553513 IP6K2Q9UHH9 426 aa5.02□□□□□ -1.61
PCNX4-206ENST00000553513 NOB1Q9ULX3 412 aaKnown RBP5.02□□□□□ -1.61
PCNX4-206ENST00000553513 LUC7L2Q9Y383 392 aaKnown RBP5.02□□□□□ -1.61
PCNX4-206ENST00000553513 NOC2LQ9Y3T9 749 aaKnown RBP5.02□□□□□ -1.61
PCNX4-206ENST00000553513 PLEKHD1A6NEE1 506 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 MT-CO1P00395 513 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 MYL1P05976 194 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 ACO1P21399 889 aaKnown RBP5.01□□□□□ -1.61
PCNX4-206ENST00000553513 LSP1P33241 339 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 MSX2P35548 267 aaPredicted RBP5.01□□□□□ -1.61
PCNX4-206ENST00000553513 SMAD3P84022 425 aaKnown RBP5.01□□□□□ -1.61
PCNX4-206ENST00000553513 HHEXQ03014 270 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 RIN1Q13671 783 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 GRM7Q14831 915 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 CLUL1Q15846 466 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 GFOD2Q3B7J2 385 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 SPDYAQ5MJ70 313 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 GPR158Q5T848 1215 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 PGM2L1Q6PCE3 622 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 SPRED1Q7Z699 444 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 GPR135Q8IZ08 494 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 MYL10Q9BUA6 226 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 PITHD1Q9GZP4 211 aaPredicted RBP5.01□□□□□ -1.61
PCNX4-206ENST00000553513 CDH19Q9H159 772 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 MTG2Q9H4K7 406 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 MKS1Q9NXB0 559 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 PLA2G3Q9NZ20 509 aa5.01□□□□□ -1.61
PCNX4-206ENST00000553513 RBM8AQ9Y5S9 174 aaKnown RBP5.01□□□□□ -1.61
PCNX4-206ENST00000553513 A0A0A6YYJ9 748 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 ST20-MTHFSA0A0A6YYL1 179 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 A0A1W2PRX2 142 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 GABRDO14764 452 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 DAPK3O43293 454 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 TGM5O43548 720 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 OPHN1O60890 802 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 ZSCAN20P17040 1043 aaPredicted RBP5□□□□□ -1.61
PCNX4-206ENST00000553513 VCAM1P19320 739 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 ADCY7P51828 1080 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 PHC1P78364 1004 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 ATP2C1P98194 919 aaPredicted RBP5□□□□□ -1.61
PCNX4-206ENST00000553513 FOXL1Q12952 345 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 TCIRG1Q13488 830 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 BIRC2Q13490 618 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 LRRC41Q15345 812 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 MAMDC4Q6UXC1 1216 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 Q6ZSN1 163 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 ESPNLQ6ZVH7 1005 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 ADGRE4PQ86SQ3 457 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 JPH3Q8WXH2 748 aaPredicted RBP5□□□□□ -1.61
PCNX4-206ENST00000553513 HIST1H2AHQ96KK5 128 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 HIST1H2AJQ99878 128 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 SLC52A1Q9NWF4 448 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 DNAI1Q9UI46 699 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 KCNG1Q9UIX4 513 aa5□□□□□ -1.61
PCNX4-206ENST00000553513 C2orf78A6NCI8 922 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 GOLGA8BA8MQT2 603 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 XPOTO43592 962 aaKnown RBP4.99□□□□□ -1.61
PCNX4-206ENST00000553513 GNALP38405 381 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 BPIFB4P59827 614 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 ZXDAP98168 799 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 KLF1Q13351 362 aaPredicted RBP4.99□□□□□ -1.61
PCNX4-206ENST00000553513 MAN2A1Q16706 1144 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 GAGE13Q4V321 117 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 FAM102BQ5T8I3 360 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 KSR2Q6VAB6 950 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 C14orf80Q86SX3 495 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 CLEC14AQ86T13 490 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 ZNF610Q8N9Z0 462 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 PLA2G15Q8NCC3 412 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 FERMT2Q96AC1 680 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 FUBP3Q96I24 572 aaKnown RBP eCLIP4.99□□□□□ -1.61
PCNX4-206ENST00000553513 CAMKK2Q96RR4 588 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 MPHOSPH9Q99550 1183 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 NOL10Q9BSC4 688 aaKnown RBP4.99□□□□□ -1.61
PCNX4-206ENST00000553513 C14orf119Q9NWQ9 140 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 MSRAQ9UJ68 235 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 RCAN3Q9UKA8 241 aa4.99□□□□□ -1.61
PCNX4-206ENST00000553513 TNKSO95271 1327 aa4.98□□□□□ -1.61
PCNX4-206ENST00000553513 GOLGA8AA7E2F4 631 aa4.98□□□□□ -1.61
PCNX4-206ENST00000553513 RFPL1O75677 317 aa4.98□□□□□ -1.61
PCNX4-206ENST00000553513 FSBPO95073 299 aa4.98□□□□□ -1.61
PCNX4-206ENST00000553513 IL33O95760 270 aa4.98□□□□□ -1.61
PCNX4-206ENST00000553513 IARSP41252 1262 aaKnown RBP4.98□□□□□ -1.61
PCNX4-206ENST00000553513 RECQLP46063 649 aaPredicted RBP4.98□□□□□ -1.61
PCNX4-206ENST00000553513 SAFB2Q14151 953 aaKnown RBP eCLIP4.98□□□□□ -1.61
PCNX4-206ENST00000553513 ACAP2Q15057 778 aa4.98□□□□□ -1.61
PCNX4-206ENST00000553513 MINDY4Q4G0A6 757 aa4.98□□□□□ -1.61
PCNX4-206ENST00000553513 BROXQ5VW32 411 aa4.98□□□□□ -1.61
PCNX4-206ENST00000553513 KRT40Q6A162 431 aa4.98□□□□□ -1.61
PCNX4-206ENST00000553513 CXorf57Q6NSI4 855 aaKnown RBP4.98□□□□□ -1.61
PCNX4-206ENST00000553513 UNQ6494/PRO21346Q6UXR6 183 aa4.98□□□□□ -1.61
PCNX4-206ENST00000553513 CERS3Q8IU89 383 aa4.98□□□□□ -1.61
PCNX4-206ENST00000553513 TCEAL8Q8IYN2 117 aa4.98□□□□□ -1.61
PCNX4-206ENST00000553513 D2HGDHQ8N465 521 aa4.98□□□□□ -1.61
PCNX4-206ENST00000553513 ZNF808Q8N4W9 903 aaPredicted RBP4.98□□□□□ -1.61
PCNX4-206ENST00000553513 ANKRD53Q8N9V6 530 aa4.98□□□□□ -1.61
PCNX4-206ENST00000553513 TMEM176AQ96HP8 235 aa4.98□□□□□ -1.61
PCNX4-206ENST00000553513 RPL10LQ96L21 214 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms