RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 EXTL1Q92935 676 aa9.09□□□□□ -0.95
PCNX1-205ENST00000553508 ACAP3Q96P50 834 aa9.09□□□□□ -0.95
PCNX1-205ENST00000553508 QRSL1Q9H0R6 528 aaKnown RBP9.09□□□□□ -0.95
PCNX1-205ENST00000553508 C14orf119Q9NWQ9 140 aa9.09□□□□□ -0.95
PCNX1-205ENST00000553508 DPP7Q9UHL4 492 aa9.09□□□□□ -0.95
PCNX1-205ENST00000553508 CDY2AQ9Y6F7 541 aa9.09□□□□□ -0.95
PCNX1-205ENST00000553508 MATN3O15232 486 aa9.08□□□□□ -0.96
PCNX1-205ENST00000553508 PRAMEF4O60810 478 aa9.08□□□□□ -0.96
PCNX1-205ENST00000553508 STC2O76061 302 aa9.08□□□□□ -0.96
PCNX1-205ENST00000553508 PRKD3O94806 890 aa9.08□□□□□ -0.96
PCNX1-205ENST00000553508 ENPP1P22413 925 aa9.08□□□□□ -0.96
PCNX1-205ENST00000553508 CASRP41180 1078 aa9.08□□□□□ -0.96
PCNX1-205ENST00000553508 CCT2P78371 535 aaKnown RBP9.08□□□□□ -0.96
PCNX1-205ENST00000553508 ELAVL1Q15717 326 aaKnown RBP9.08□□□□□ -0.96
PCNX1-205ENST00000553508 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.08□□□□□ -0.96
PCNX1-205ENST00000553508 CCDC178Q5BJE1 867 aa9.08□□□□□ -0.96
PCNX1-205ENST00000553508 FKBP15Q5T1M5 1219 aa9.08□□□□□ -0.96
PCNX1-205ENST00000553508 RNF187Q5TA31 235 aaPredicted RBP9.08□□□□□ -0.96
PCNX1-205ENST00000553508 ZNF662Q6ZS27 426 aa9.08□□□□□ -0.96
PCNX1-205ENST00000553508 OR5M3Q8NGP4 307 aa9.08□□□□□ -0.96
PCNX1-205ENST00000553508 AHCYL2Q96HN2 611 aaKnown RBP9.08□□□□□ -0.96
PCNX1-205ENST00000553508 MPHOSPH9Q99550 1183 aa9.08□□□□□ -0.96
PCNX1-205ENST00000553508 EPC1Q9H2F5 836 aa9.08□□□□□ -0.96
PCNX1-205ENST00000553508 HECAQ9UBI9 543 aaPredicted RBP9.08□□□□□ -0.96
PCNX1-205ENST00000553508 A0A1W2PR48 441 aa9.07□□□□□ -0.96
PCNX1-205ENST00000553508 AMHP03971 560 aa9.07□□□□□ -0.96
PCNX1-205ENST00000553508 SPIDRQ14159 915 aa9.07□□□□□ -0.96
PCNX1-205ENST00000553508 UBE3CQ15386 1083 aa9.07□□□□□ -0.96
PCNX1-205ENST00000553508 LCE5AQ5TCM9 118 aa9.07□□□□□ -0.96
PCNX1-205ENST00000553508 TAS1R1Q7RTX1 841 aa9.07□□□□□ -0.96
PCNX1-205ENST00000553508 SPATS2Q86XZ4 545 aaKnown RBP9.07□□□□□ -0.96
PCNX1-205ENST00000553508 ELOA2Q8IYF1 753 aaPredicted RBP9.07□□□□□ -0.96
PCNX1-205ENST00000553508 LMBR1Q8WVP7 490 aa9.07□□□□□ -0.96
PCNX1-205ENST00000553508 CANXP27824 592 aaKnown RBP9.06□□□□□ -0.96
PCNX1-205ENST00000553508 FAM214AQ32MH5 1076 aa9.06□□□□□ -0.96
PCNX1-205ENST00000553508 RNF219Q5W0B1 726 aaPredicted RBP9.06□□□□□ -0.96
PCNX1-205ENST00000553508 DDX42Q86XP3 938 aaKnown RBP eCLIP9.06□□□□□ -0.96
PCNX1-205ENST00000553508 ZNF512Q96ME7 567 aaPredicted RBP9.06□□□□□ -0.96
PCNX1-205ENST00000553508 PLSCR1O15162 318 aa9.05□□□□□ -0.96
PCNX1-205ENST00000553508 MTSS1O43312 755 aa9.05□□□□□ -0.96
PCNX1-205ENST00000553508 CFBP00751 764 aa9.05□□□□□ -0.96
PCNX1-205ENST00000553508 TNFRSF1AP19438 455 aa9.05□□□□□ -0.96
PCNX1-205ENST00000553508 CRHR2Q13324 411 aa9.05□□□□□ -0.96
PCNX1-205ENST00000553508 TOR2AQ5JU69 321 aa9.05□□□□□ -0.96
PCNX1-205ENST00000553508 ABHD15Q6UXT9 468 aa9.05□□□□□ -0.96
PCNX1-205ENST00000553508 C1orf210Q8IVY1 113 aa9.05□□□□□ -0.96
PCNX1-205ENST00000553508 GSPT2Q8IYD1 628 aaKnown RBP9.05□□□□□ -0.96
PCNX1-205ENST00000553508 MB21D1Q8N884 522 aa9.05□□□□□ -0.96
PCNX1-205ENST00000553508 RAX2Q96IS3 184 aa9.05□□□□□ -0.96
PCNX1-205ENST00000553508 MCM8Q9UJA3 840 aa9.05□□□□□ -0.96
PCNX1-205ENST00000553508 GIT1Q9Y2X7 761 aa9.05□□□□□ -0.96
PCNX1-205ENST00000553508 LTA4HP09960 611 aaKnown RBP9.04□□□□□ -0.96
PCNX1-205ENST00000553508 DUSP2Q05923 314 aa9.04□□□□□ -0.96
PCNX1-205ENST00000553508 THEMISQ8N1K5 641 aaPredicted RBP9.04□□□□□ -0.96
PCNX1-205ENST00000553508 ANKRD35Q8N283 1001 aa9.04□□□□□ -0.96
PCNX1-205ENST00000553508 MIEF2Q96C03 454 aa9.04□□□□□ -0.96
PCNX1-205ENST00000553508 TMX1Q9H3N1 280 aa9.04□□□□□ -0.96
PCNX1-205ENST00000553508 NRP1O14786 923 aa9.03□□□□□ -0.96
PCNX1-205ENST00000553508 ACRV1P26436 265 aa9.03□□□□□ -0.96
PCNX1-205ENST00000553508 SRSF2Q01130 221 aaKnown RBP9.03□□□□□ -0.96
PCNX1-205ENST00000553508 FAPQ12884 760 aa9.03□□□□□ -0.96
PCNX1-205ENST00000553508 RNF207Q6ZRF8 634 aa9.03□□□□□ -0.96
PCNX1-205ENST00000553508 Q6ZRM9 215 aa9.03□□□□□ -0.96
PCNX1-205ENST00000553508 PGBD4Q96DM1 585 aa9.03□□□□□ -0.96
PCNX1-205ENST00000553508 VPS11Q9H270 941 aa9.03□□□□□ -0.96
PCNX1-205ENST00000553508 CYP27B1O15528 508 aa9.02□□□□□ -0.97
PCNX1-205ENST00000553508 MFAP3LO75121 409 aa9.02□□□□□ -0.97
PCNX1-205ENST00000553508 TMEM127O75204 238 aa9.02□□□□□ -0.97
PCNX1-205ENST00000553508 DGCR2P98153 550 aa9.02□□□□□ -0.97
PCNX1-205ENST00000553508 IL17DQ8TAD2 202 aa9.02□□□□□ -0.97
PCNX1-205ENST00000553508 AUTS2Q8WXX7 1259 aa9.02□□□□□ -0.97
PCNX1-205ENST00000553508 ZNF341Q9BYN7 854 aa9.02□□□□□ -0.97
PCNX1-205ENST00000553508 CSRNP2Q9H175 543 aa9.02□□□□□ -0.97
PCNX1-205ENST00000553508 ATP8A1Q9Y2Q0 1164 aa9.02□□□□□ -0.97
PCNX1-205ENST00000553508 PHLDB1Q86UU1 1377 aa9.01□□□□□ -0.97
PCNX1-205ENST00000553508 HOXA3O43365 443 aaPredicted RBP9.01□□□□□ -0.97
PCNX1-205ENST00000553508 GNAT2P19087 354 aa9.01□□□□□ -0.97
PCNX1-205ENST00000553508 CTSSP25774 331 aa9.01□□□□□ -0.97
PCNX1-205ENST00000553508 SCNN1GP51170 649 aa9.01□□□□□ -0.97
PCNX1-205ENST00000553508 MRPS9P82933 396 aaKnown RBP9.01□□□□□ -0.97
PCNX1-205ENST00000553508 RRP1BQ14684 758 aaKnown RBP9.01□□□□□ -0.97
PCNX1-205ENST00000553508 MFSD5Q6N075 450 aa9.01□□□□□ -0.97
PCNX1-205ENST00000553508 TSPEARQ8WU66 669 aa9.01□□□□□ -0.97
PCNX1-205ENST00000553508 SNX33Q8WV41 574 aa9.01□□□□□ -0.97
PCNX1-205ENST00000553508 ATXN2LQ8WWM7 1075 aaKnown RBP9.01□□□□□ -0.97
PCNX1-205ENST00000553508 PLEKHG4BQ96PX9 1271 aa9.01□□□□□ -0.97
PCNX1-205ENST00000553508 ZNF747Q9BV97 191 aa9.01□□□□□ -0.97
PCNX1-205ENST00000553508 DNAJC28Q9NX36 388 aa9.01□□□□□ -0.97
PCNX1-205ENST00000553508 SLC5A4Q9NY91 659 aa9.01□□□□□ -0.97
PCNX1-205ENST00000553508 HK1P19367 917 aa9□□□□□ -0.97
PCNX1-205ENST00000553508 GPR3P46089 330 aa9□□□□□ -0.97
PCNX1-205ENST00000553508 ZXDAP98168 799 aa9□□□□□ -0.97
PCNX1-205ENST00000553508 CNGB1Q14028 1251 aaPredicted RBP9□□□□□ -0.97
PCNX1-205ENST00000553508 CNTD1Q8N815 330 aa9□□□□□ -0.97
PCNX1-205ENST00000553508 GLB1L3Q8NCI6 653 aaPredicted RBP9□□□□□ -0.97
PCNX1-205ENST00000553508 IL17RAQ96F46 866 aa9□□□□□ -0.97
PCNX1-205ENST00000553508 GPR87Q9BY21 358 aa9□□□□□ -0.97
PCNX1-205ENST00000553508 ENKD1Q9H0I2 346 aa9□□□□□ -0.97
PCNX1-205ENST00000553508 IFT122Q9HBG6 1241 aa9□□□□□ -0.97
PCNX1-205ENST00000553508 WASHC2AQ641Q2 1341 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms