RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 THNSL1Q8IYQ7 743 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 ABI1Q8IZP0 508 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 LRRC43Q8N309 656 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 MCPH1Q8NEM0 835 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 SNX21Q969T3 373 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 INTS4Q96HW7 963 aaKnown RBP10.84□□□□□ -0.67
HDAC7-229ENST00000549883 APOL6Q9BWW8 343 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 CCDC113Q9H0I3 377 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 CXCL16Q9H2A7 254 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 NXF3Q9H4D5 531 aaKnown RBP10.84□□□□□ -0.67
HDAC7-229ENST00000549883 NSUN3Q9H649 340 aaKnown RBP10.84□□□□□ -0.67
HDAC7-229ENST00000549883 IGFLR1Q9H665 355 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 UBE2ZQ9H832 354 aaPredicted RBP10.84□□□□□ -0.67
HDAC7-229ENST00000549883 TBC1D13Q9NVG8 400 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 MIOSQ9NXC5 875 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 DNAJB4Q9UDY4 337 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 IPPQ9Y573 584 aa10.84□□□□□ -0.67
HDAC7-229ENST00000549883 NPHP3-ACAD11A0A0J9YXS1 232 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 H3BQ06 376 aaPredicted RBP10.83□□□□□ -0.68
HDAC7-229ENST00000549883 HOXA2O43364 376 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 HIP1RO75146 1068 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 DDHD2O94830 711 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 NPTXRO95502 500 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 LAG3P18627 525 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 MUTP22033 750 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 MARCKSP29966 332 aaPredicted RBP10.83□□□□□ -0.68
HDAC7-229ENST00000549883 BCAR1P56945 870 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 POU5F1BQ06416 359 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 TMEM119Q4V9L6 283 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 TIGD5Q53EQ6 642 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 NOMO2Q5JPE7 1267 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 SPECC1Q5M775 1068 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 HYIQ5T013 277 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 FOXD4L5Q5VV16 416 aaPredicted RBP10.83□□□□□ -0.68
HDAC7-229ENST00000549883 EEF1DP3Q658K8 133 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 CDCA2Q69YH5 1023 aaPredicted RBP10.83□□□□□ -0.68
HDAC7-229ENST00000549883 RINT1Q6NUQ1 792 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 FAM43BQ6ZT52 329 aaPredicted RBP10.83□□□□□ -0.68
HDAC7-229ENST00000549883 EP400NLQ6ZTU2 488 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 C1orf186Q6ZWK4 172 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 BRAPQ7Z569 592 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 RBM23Q86U06 439 aaKnown RBP10.83□□□□□ -0.68
HDAC7-229ENST00000549883 SPRYD3Q8NCJ5 442 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 FOXD4L4Q8WXT5 416 aaPredicted RBP10.83□□□□□ -0.68
HDAC7-229ENST00000549883 ZFP42Q96MM3 310 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 NFKBIZQ9BYH8 718 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 RAB34Q9BZG1 259 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 GBP3Q9H0R5 595 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 LMAN2LQ9H0V9 348 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 CSRNP2Q9H175 543 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 FZD8Q9H461 694 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 NRDE2Q9H7Z3 1164 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 DNM3Q9UQ16 869 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 PCDHB12Q9Y5F1 795 aa10.83□□□□□ -0.68
HDAC7-229ENST00000549883 TTC28Q96AY4 2481 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 A0A1B0GUA9 196 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 F8W810 466 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 FSCN2O14926 492 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 PER2O15055 1255 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 ZC3H11AO75152 810 aaKnown RBP eCLIP10.82□□□□□ -0.68
HDAC7-229ENST00000549883 TBX10O75333 385 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 POMCP01189 267 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 SSBP05455 408 aaKnown RBP eCLIP10.82□□□□□ -0.68
HDAC7-229ENST00000549883 NCLP19338 710 aaKnown RBP10.82□□□□□ -0.68
HDAC7-229ENST00000549883 PDCP20941 246 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 AKAP5P24588 427 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 SLC11A1P49279 550 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 RAB27AP51159 221 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 SLC12A3P55017 1021 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 CACNB1Q02641 598 aaPredicted RBP10.82□□□□□ -0.68
HDAC7-229ENST00000549883 COL19A1Q14993 1142 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 KARSQ15046 597 aaKnown RBP10.82□□□□□ -0.68
HDAC7-229ENST00000549883 CLUL1Q15846 466 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 NAALADL2Q58DX5 795 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 NT5DC1Q5TFE4 455 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 ARL6IP4Q66PJ3 421 aaKnown RBP10.82□□□□□ -0.68
HDAC7-229ENST00000549883 GLB1LQ6UWU2 654 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 TAS1R3Q7RTX0 852 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 CABP7Q86V35 215 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 SLC39A11Q8N1S5 342 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 VN1R2Q8NFZ6 395 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.82□□□□□ -0.68
HDAC7-229ENST00000549883 ADAMTS19Q8TE59 1207 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 ZNF558Q96NG5 402 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 CLIC6Q96NY7 704 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 USP28Q96RU2 1077 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 GAD1Q99259 594 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 VN1R3Q9BXE9 311 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 PDZD7Q9H5P4 517 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 RSAD1Q9HA92 442 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 RNF216Q9NWF9 866 aaPredicted RBP10.82□□□□□ -0.68
HDAC7-229ENST00000549883 CLDND1Q9NY35 253 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 KLK14Q9P0G3 267 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 CACNG4Q9UBN1 327 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 FBXO2Q9UK22 296 aaPredicted RBP10.82□□□□□ -0.68
HDAC7-229ENST00000549883 COG5Q9UP83 839 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 CUL9Q8IWT3 2517 aa10.82□□□□□ -0.68
HDAC7-229ENST00000549883 HIDE1A8MVS5 230 aa10.81□□□□□ -0.68
HDAC7-229ENST00000549883 STX6O43752 255 aa10.81□□□□□ -0.68
HDAC7-229ENST00000549883 GLP2RO95838 553 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms