RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 BICD1Q96G01 975 aa10.73□□□□□ -0.69
SMARCD1-206ENST00000549274 DHTKD1Q96HY7 919 aaPredicted RBP10.73□□□□□ -0.69
SMARCD1-206ENST00000549274 FDXACB1Q9BRP7 624 aaPredicted RBP10.73□□□□□ -0.69
SMARCD1-206ENST00000549274 NOC4LQ9BVI4 516 aaKnown RBP10.73□□□□□ -0.69
SMARCD1-206ENST00000549274 ADAMTS10Q9H324 1103 aa10.73□□□□□ -0.69
SMARCD1-206ENST00000549274 CHST12Q9NRB3 414 aa10.73□□□□□ -0.69
SMARCD1-206ENST00000549274 MAN1B1Q9UKM7 699 aa10.73□□□□□ -0.69
SMARCD1-206ENST00000549274 SFI1A8K8P3 1242 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 HNRNPDLO14979 420 aaKnown RBP10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 CALUO43852 315 aaPredicted RBP10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 PPP1R37O75864 691 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 LDHAP00338 332 aaKnown RBP10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 TIMP1P01033 207 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 ZSCAN20P17040 1043 aaPredicted RBP10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 RPL13P26373 211 aaKnown RBP10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 LIG4P49917 911 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 SOX10P56693 466 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 LRRC63Q05C16 580 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 PRPF4BQ13523 1007 aaKnown RBP10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 MYBPC2Q14324 1141 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 HIC1Q14526 733 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 KNOP1Q1ED39 458 aaKnown RBP10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 DCAF4L1Q3SXM0 396 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 FBXO47Q5MNV8 452 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 ZNF618Q5T7W0 954 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 NOTUMQ6P988 496 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 SEPT8Q92599 483 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 DHX38Q92620 1227 aaKnown RBP10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 CTAGE1Q96RT6 745 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 OSMRQ99650 979 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 GBP3Q9H0R5 595 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 FZD8Q9H461 694 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 IFT122Q9HBG6 1241 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 TYW1Q9NV66 732 aaKnown RBP10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 TBX20Q9UMR3 447 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 GINS2Q9Y248 185 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 CNTNAP2Q9UHC6 1331 aa10.72□□□□□ -0.69
SMARCD1-206ENST00000549274 PDXKO00764 312 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 CHRNA1P02708 482 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 CTSHP09668 335 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 IQCF3P0C7M6 154 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 ACTN1P12814 892 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 ERCC5P28715 1186 aaPredicted RBP10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 CASP1P29466 404 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 RAB27AP51159 221 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 POU5F1Q01860 360 aaKnown RBP10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 MBTD1Q05BQ5 628 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 PPIGQ13427 754 aaKnown RBP eCLIP10.71□□□□□ -0.697e-8■■■□□ 17
SMARCD1-206ENST00000549274 NFIL3Q16649 462 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 ZSCAN23Q3MJ62 389 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 MFSD5Q6N075 450 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 EPM2AIP1Q7L775 607 aaPredicted RBP10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 USP37Q86T82 979 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 TMEM174Q8WUU8 243 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 BSNDQ8WZ55 320 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 RNF25Q96BH1 459 aaPredicted RBP10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 ALPK3Q96L96 1907 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 FIZ1Q96SL8 496 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 LBHD1Q9BQE6 289 aaPredicted RBP10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 STRA6Q9BX79 667 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 IFIH1Q9BYX4 1025 aaKnown RBP10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 CCDC113Q9H0I3 377 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 MTIF3Q9H2K0 278 aaKnown RBP10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 KIAA1586Q9HCI6 787 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 SLC39A2Q9NP94 309 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 PRDM5Q9NQX1 630 aaPredicted RBP10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 C1orf112Q9NSG2 853 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 AGPAT5Q9NUQ2 364 aa10.71□□□□□ -0.69
SMARCD1-206ENST00000549274 ZMYM2Q9UBW7 1377 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 ADGRA3Q8IWK6 1321 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 CLDN3O15551 220 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 TOM1L1O75674 476 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 CXCL10P02778 98 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 GARTP22102 1010 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 NMT1P30419 496 aaKnown RBP10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 TPM4P67936 248 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 TYRO3Q06418 890 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 TMEM62Q0P6H9 643 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 STK4Q13043 487 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 PAK1Q13153 545 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 EDRF1Q3B7T1 1238 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 ATF7IP2Q5U623 682 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 KSR1Q8IVT5 923 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 C12orf56Q8IXR9 622 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 ADSSL1Q8N142 457 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 KIAA0895Q8NCT3 520 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 NOC3LQ8WTT2 800 aaKnown RBP10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 PPP1R13LQ8WUF5 828 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 DPF3Q92784 378 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 TRAIPQ9BWF2 469 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 TRIM6Q9C030 488 aaPredicted RBP10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 TBC1D7Q9P0N9 293 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 TRAF3IP3Q9Y228 551 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 TNFSF13BQ9Y275 285 aa10.7□□□□□ -0.7
SMARCD1-206ENST00000549274 SMTNL1A8MU46 457 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 BIN1O00499 593 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 BAIAP3O94812 1187 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 GNA14O95837 355 aa10.69□□□□□ -0.7
SMARCD1-206ENST00000549274 MYBP10242 640 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms