RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 TMX1Q9H3N1 280 aa23.21■■□□□ 1.31
CACNB3-210ENST00000548874 H0YGN5 161 aa23.2■■□□□ 1.3
CACNB3-210ENST00000548874 ACKR2O00590 384 aa23.2■■□□□ 1.3
CACNB3-210ENST00000548874 TSPAN1O60635 241 aa23.2■■□□□ 1.3
CACNB3-210ENST00000548874 EDN1P05305 212 aa23.2■■□□□ 1.3
CACNB3-210ENST00000548874 EPHB4P54760 987 aa23.2■■□□□ 1.3
CACNB3-210ENST00000548874 NFX1Q12986 1120 aaKnown RBP23.2■■□□□ 1.3
CACNB3-210ENST00000548874 ALCAMQ13740 583 aa23.2■■□□□ 1.3
CACNB3-210ENST00000548874 KLHL40Q2TBA0 621 aa23.2■■□□□ 1.3
CACNB3-210ENST00000548874 ZC2HC1CQ53FD0 456 aaPredicted RBP23.2■■□□□ 1.3
CACNB3-210ENST00000548874 CNKSR3Q6P9H4 555 aa23.2■■□□□ 1.3
CACNB3-210ENST00000548874 EPM2AIP1Q7L775 607 aaPredicted RBP23.2■■□□□ 1.3
CACNB3-210ENST00000548874 GLIS3Q8NEA6 775 aa23.2■■□□□ 1.3
CACNB3-210ENST00000548874 HVCN1Q96D96 273 aa23.2■■□□□ 1.3
CACNB3-210ENST00000548874 AGPAT5Q9NUQ2 364 aa23.2■■□□□ 1.3
CACNB3-210ENST00000548874 RMND1Q9NWS8 449 aa23.2■■□□□ 1.3
CACNB3-210ENST00000548874 KIAA1468Q9P260 1216 aa23.2■■□□□ 1.3
CACNB3-210ENST00000548874 CNTNAP2Q9UHC6 1331 aa23.19■■□□□ 1.3
CACNB3-210ENST00000548874 ERLIN2O94905 339 aa23.19■■□□□ 1.3
CACNB3-210ENST00000548874 GCNT3O95395 438 aa23.19■■□□□ 1.3
CACNB3-210ENST00000548874 MYBP10242 640 aa23.19■■□□□ 1.3
CACNB3-210ENST00000548874 HOXA11P31270 313 aaPredicted RBP23.19■■□□□ 1.3
CACNB3-210ENST00000548874 MAGEA10P43363 369 aaPredicted RBP23.19■■□□□ 1.3
CACNB3-210ENST00000548874 STK4Q13043 487 aa23.19■■□□□ 1.3
CACNB3-210ENST00000548874 DSC3Q14574 896 aa23.19■■□□□ 1.3
CACNB3-210ENST00000548874 MAP4K3Q8IVH8 894 aa23.19■■□□□ 1.3
CACNB3-210ENST00000548874 KIAA0895Q8NCT3 520 aa23.19■■□□□ 1.3
CACNB3-210ENST00000548874 SLC39A2Q9NP94 309 aa23.19■■□□□ 1.3
CACNB3-210ENST00000548874 TBX20Q9UMR3 447 aa23.19■■□□□ 1.3
CACNB3-210ENST00000548874 PCDHB13Q9Y5F0 798 aa23.19■■□□□ 1.3
CACNB3-210ENST00000548874 TTLL13PA6NNM8 815 aa23.18■■□□□ 1.3
CACNB3-210ENST00000548874 EIF3DO15371 548 aaKnown RBP eCLIP23.18■■□□□ 1.3
CACNB3-210ENST00000548874 B4GALT5O43286 388 aa23.18■■□□□ 1.3
CACNB3-210ENST00000548874 ACRP10323 421 aa23.18■■□□□ 1.3
CACNB3-210ENST00000548874 AXLP30530 894 aa23.18■■□□□ 1.3
CACNB3-210ENST00000548874 RBM43Q6ZSC3 357 aaKnown RBP23.18■■□□□ 1.3
CACNB3-210ENST00000548874 FTHL17Q9BXU8 183 aa23.18■■□□□ 1.3
CACNB3-210ENST00000548874 CHST12Q9NRB3 414 aa23.18■■□□□ 1.3
CACNB3-210ENST00000548874 MAN1B1Q9UKM7 699 aa23.18■■□□□ 1.3
CACNB3-210ENST00000548874 PIGRP01833 764 aa23.17■■□□□ 1.3
CACNB3-210ENST00000548874 ARF4P18085 180 aaPredicted RBP23.17■■□□□ 1.3
CACNB3-210ENST00000548874 STRN3Q13033 797 aa23.17■■□□□ 1.3
CACNB3-210ENST00000548874 PRPF4BQ13523 1007 aaKnown RBP23.17■■□□□ 1.3
CACNB3-210ENST00000548874 L1TD1Q5T7N2 865 aaKnown RBP23.17■■□□□ 1.3
CACNB3-210ENST00000548874 STXBP4Q6ZWJ1 553 aa23.17■■□□□ 1.3
CACNB3-210ENST00000548874 ZNF507Q8TCN5 953 aa23.17■■□□□ 1.3
CACNB3-210ENST00000548874 LINC01599Q8WXQ3 324 aa23.17■■□□□ 1.3
CACNB3-210ENST00000548874 GDF15Q99988 308 aa23.17■■□□□ 1.3
CACNB3-210ENST00000548874 MRPL4Q9BYD3 311 aaKnown RBP23.17■■□□□ 1.3
CACNB3-210ENST00000548874 TMEM63CQ9P1W3 806 aa23.17■■□□□ 1.3
CACNB3-210ENST00000548874 UBE4BO95155 1302 aa23.16■■□□□ 1.3
CACNB3-210ENST00000548874 MGEA5O60502 916 aa23.16■■□□□ 1.3
CACNB3-210ENST00000548874 PRPF6O94906 941 aaKnown RBP23.16■■□□□ 1.3
CACNB3-210ENST00000548874 KCNA1Q09470 495 aa23.16■■□□□ 1.3
CACNB3-210ENST00000548874 BMT2Q1RMZ1 405 aa23.16■■□□□ 1.3
CACNB3-210ENST00000548874 TMEM240Q5SV17 173 aa23.16■■□□□ 1.3
CACNB3-210ENST00000548874 CCDC183Q5T5S1 534 aa23.16■■□□□ 1.3
CACNB3-210ENST00000548874 PSRC1Q6PGN9 363 aaPredicted RBP23.16■■□□□ 1.3
CACNB3-210ENST00000548874 ZPBP2Q6X784 338 aa23.16■■□□□ 1.3
CACNB3-210ENST00000548874 SCFD1Q8WVM8 642 aa23.16■■□□□ 1.3
CACNB3-210ENST00000548874 PIN4Q9Y237 131 aaKnown RBP23.16■■□□□ 1.3
CACNB3-210ENST00000548874 USP20Q9Y2K6 914 aa23.16■■□□□ 1.3
CACNB3-210ENST00000548874 GDAQ9Y2T3 454 aa23.16■■□□□ 1.3
CACNB3-210ENST00000548874 A0A1B0GUA9 196 aa23.15■■□□□ 1.3
CACNB3-210ENST00000548874 ABHD14A-ACY1A0A1B0GW23 586 aa23.15■■□□□ 1.3
CACNB3-210ENST00000548874 HOXD13P35453 343 aa23.15■■□□□ 1.3
CACNB3-210ENST00000548874 NCBP1Q09161 790 aaKnown RBP23.15■■□□□ 1.3
CACNB3-210ENST00000548874 MORC3Q14149 939 aa23.15■■□□□ 1.3
CACNB3-210ENST00000548874 SKOR2Q2VWA4 1001 aaPredicted RBP23.15■■□□□ 1.3
CACNB3-210ENST00000548874 ZNF658Q5TYW1 1059 aaPredicted RBP23.15■■□□□ 1.3
CACNB3-210ENST00000548874 ZNF365Q70YC5 407 aa23.15■■□□□ 1.3
CACNB3-210ENST00000548874 RTN4RL1Q86UN2 441 aaPredicted RBP23.15■■□□□ 1.3
CACNB3-210ENST00000548874 TRIML1Q8N9V2 468 aa23.15■■□□□ 1.3
CACNB3-210ENST00000548874 CCDC51Q96ER9 411 aa23.15■■□□□ 1.3
CACNB3-210ENST00000548874 CPB2Q96IY4 423 aa23.15■■□□□ 1.3
CACNB3-210ENST00000548874 ACCSQ96QU6 501 aa23.15■■□□□ 1.3
CACNB3-210ENST00000548874 ACO2Q99798 780 aaKnown RBP23.15■■□□□ 1.3
CACNB3-210ENST00000548874 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.15■■□□□ 1.3
CACNB3-210ENST00000548874 TARS2Q9BW92 718 aaKnown RBP23.15■■□□□ 1.3
CACNB3-210ENST00000548874 TRAIPQ9BWF2 469 aa23.15■■□□□ 1.3
CACNB3-210ENST00000548874 GTPBP4Q9BZE4 634 aaKnown RBP23.15■■□□□ 1.3
CACNB3-210ENST00000548874 TSPYL2Q9H2G4 693 aaPredicted RBP23.15■■□□□ 1.3
CACNB3-210ENST00000548874 PDE4DIPQ5VU43 2346 aa23.14■■□□□ 1.3
CACNB3-210ENST00000548874 BAIAP3O94812 1187 aa23.14■■□□□ 1.29
CACNB3-210ENST00000548874 FGBP02675 491 aa23.14■■□□□ 1.29
CACNB3-210ENST00000548874 IKBKEQ14164 716 aa23.14■■□□□ 1.29
CACNB3-210ENST00000548874 COBLL1Q53SF7 1204 aa23.14■■□□□ 1.29
CACNB3-210ENST00000548874 NOTUMQ6P988 496 aa23.14■■□□□ 1.29
CACNB3-210ENST00000548874 ADAM2Q99965 735 aa23.14■■□□□ 1.29
CACNB3-210ENST00000548874 PDZD7Q9H5P4 517 aa23.14■■□□□ 1.29
CACNB3-210ENST00000548874 PTPRHQ9HD43 1115 aa23.14■■□□□ 1.29
CACNB3-210ENST00000548874 RGS18Q9NS28 235 aa23.14■■□□□ 1.29
CACNB3-210ENST00000548874 TNFSF13BQ9Y275 285 aa23.14■■□□□ 1.29
CACNB3-210ENST00000548874 TNRC18O15417 2968 aaPredicted RBP23.14■■□□□ 1.29
CACNB3-210ENST00000548874 ZMYM2Q9UBW7 1377 aa23.14■■□□□ 1.29
CACNB3-210ENST00000548874 ABLIM1O14639 778 aa23.13■■□□□ 1.29
CACNB3-210ENST00000548874 ACTN1P12814 892 aa23.13■■□□□ 1.29
CACNB3-210ENST00000548874 ZSCAN20P17040 1043 aaPredicted RBP23.13■■□□□ 1.29
CACNB3-210ENST00000548874 BMP6P22004 513 aa23.13■■□□□ 1.29
CACNB3-210ENST00000548874 PROZP22891 400 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms