RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 F8VZ95 297 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 TRAPPC3O43617 180 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 MED24O75448 989 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 AKAP3O75969 853 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 BMP3P12645 472 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 HMGB2P26583 209 aaKnown RBP10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 MFAP3P55082 362 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 STRN3Q13033 797 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 PLCB4Q15147 1175 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 ANKRD20A8PQ5CZ79 823 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 HP1BP3Q5SSJ5 553 aaPredicted RBP10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 RNF207Q6ZRF8 634 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 CATSPER3Q86XQ3 398 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 ZKSCAN4Q969J2 545 aaPredicted RBP10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 DYDC2Q96IM9 177 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 ZNF341Q9BYN7 854 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 TPX2Q9ULW0 747 aaKnown RBP10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 EXOC7Q9UPT5 735 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 EXOC1LA0A1B0GW35 172 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 CFAP73A6NFT4 308 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 RASA4BC9J798 803 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 RASA4O43374 803 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 TLR2O60603 784 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 TROVE2P10155 538 aaKnown RBP eCLIP10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 CA4P22748 312 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 FMO5P49326 533 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 SWT1Q5T5J6 900 aaKnown RBP10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 SAMD7Q7Z3H4 446 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 TMC3Q7Z5M5 1100 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 CCHCR1Q8TD31 782 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 NT5C1BQ96P26 610 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 TGS1Q96RS0 853 aaKnown RBP10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 SMC6Q96SB8 1091 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 EIF2AK1Q9BQI3 630 aaKnown RBP10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 ADAM33Q9BZ11 813 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 THAP2Q9H0W7 228 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 FBXO28Q9NVF7 368 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 NKRFO15226 690 aaKnown RBP eCLIP10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 PPP1R18Q6NYC8 613 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 CEP128Q6ZU80 1094 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 EPS8L3Q8TE67 593 aaKnown RBP10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 NSMCE1Q8WV22 266 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 C18orf8Q96DM3 657 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 AGPAT1Q99943 283 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 TEKT3Q9BXF9 490 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 SEMA4AQ9H3S1 761 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 ANAPC7Q9UJX3 599 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 USP15Q9Y4E8 981 aaPredicted RBP10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 PHLPP1O60346 1717 aa10.18□□□□□ -0.78
CALCOCO1-210ENST00000548263 RASSF10A6NK89 507 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 TNFRSF8P28908 595 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 NSFP46459 744 aaKnown RBP10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 XKR9Q5GH70 373 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 DPH6Q7L8W6 267 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 CD302Q8IX05 232 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 SUPT20HQ8NEM7 779 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 ZNF564Q8TBZ8 553 aaPredicted RBP10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 FAM20AQ96MK3 541 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 NUP85Q9BW27 656 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 CPSF2Q9P2I0 782 aaKnown RBP10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 CNOT8Q9UFF9 292 aaKnown RBP10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 PARP4Q9UKK3 1724 aaKnown RBP10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 EMSYQ7Z589 1322 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 ARFGEF2Q9Y6D5 1785 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 TMEM120BA0PK00 339 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 ATMINO43313 823 aaPredicted RBP10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 KIF1CO43896 1103 aaKnown RBP10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 TMEM253P0C7T8 217 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 ATP2A2P16615 1042 aaKnown RBP10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 PSMC6P62333 389 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 MKRN3Q13064 507 aaKnown RBP10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 AP3B2Q13367 1082 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 KYNUQ16719 465 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 HGSNATQ68CP4 663 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 CCDC62Q6P9F0 684 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 PPP1R21Q6ZMI0 780 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 MREGQ8N565 214 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 DDX23Q9BUQ8 820 aaKnown RBP10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 YIPF3Q9GZM5 350 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 CARD9Q9H257 536 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 TXLNGQ9NUQ3 528 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 PPP1R9AQ9ULJ8 1098 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 PHF2O75151 1096 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 SCP2P22307 547 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 FLT3P36888 993 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 PPP4CP60510 307 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 IFI35P80217 286 aaPredicted RBP10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 SYDE2Q5VT97 1194 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 SPATA21Q7Z572 469 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 SCYL3Q8IZE3 742 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 ACER1Q8TDN7 264 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 MTMR9Q96QG7 549 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 SPATS2LQ9NUQ6 558 aaKnown RBP10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 APEX2Q9UBZ4 518 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 CCPG1Q9ULG6 757 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 GRIN2DO15399 1336 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 NID2Q14112 1375 aa10.17□□□□□ -0.78
CALCOCO1-210ENST00000548263 LRRD1A4D1F6 860 aa10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 IGF2BP3O00425 579 aaKnown RBP eCLIP10.16□□□□□ -0.78
CALCOCO1-210ENST00000548263 CLDN3O15551 220 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms