RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 ISM2Q6H9L7 571 aa17.93■□□□□ 0.46
LIMS2-217ENST00000545738 ZNF710Q8N1W2 664 aa17.93■□□□□ 0.46
LIMS2-217ENST00000545738 SCFD1Q8WVM8 642 aa17.93■□□□□ 0.46
LIMS2-217ENST00000545738 KCNN1Q92952 543 aa17.93■□□□□ 0.46
LIMS2-217ENST00000545738 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.93■□□□□ 0.46
LIMS2-217ENST00000545738 NUP62CLQ9H1M0 184 aa17.93■□□□□ 0.46
LIMS2-217ENST00000545738 ST6GALNAC4Q9H4F1 302 aa17.93■□□□□ 0.46
LIMS2-217ENST00000545738 IL23AQ9NPF7 189 aa17.93■□□□□ 0.46
LIMS2-217ENST00000545738 AGPAT5Q9NUQ2 364 aa17.93■□□□□ 0.46
LIMS2-217ENST00000545738 MAN1B1Q9UKM7 699 aa17.93■□□□□ 0.46
LIMS2-217ENST00000545738 PHLPP2Q6ZVD8 1323 aa17.93■□□□□ 0.46
LIMS2-217ENST00000545738 ZMYM2Q9UBW7 1377 aa17.93■□□□□ 0.46
LIMS2-217ENST00000545738 PRPF6O94906 941 aaKnown RBP17.92■□□□□ 0.46
LIMS2-217ENST00000545738 GCNT3O95395 438 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 RFC2P35250 354 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 DSC3Q14574 896 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 KCNB1Q14721 858 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 FAM187BQ17R55 369 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 SLC39A4Q6P5W5 647 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 PPP4R3CPQ6ZMV5 832 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 CATSPER4Q7RTX7 472 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 ZBTB8OSQ8IWT0 167 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 HAPLN2Q9GZV7 340 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 TMEM134Q9H6X4 195 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 EXOC1Q9NV70 894 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 TBX20Q9UMR3 447 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 CHD9Q3L8U1 2897 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.92■□□□□ 0.46
LIMS2-217ENST00000545738 K7ERI5 159 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 BIN1O00499 593 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 ABLIM1O14639 778 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 SFPQP23246 707 aaKnown RBP eCLIP17.92■□□□□ 0.46
LIMS2-217ENST00000545738 SMTNP53814 917 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 MAPK6Q16659 721 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 TMEM240Q5SV17 173 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 C9orf50Q5SZB4 431 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 EEF1DP3Q658K8 133 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 ZNF365Q70YC5 407 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 USP38Q8NB14 1042 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 GDF15Q99988 308 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 TARS2Q9BW92 718 aaKnown RBP17.92■□□□□ 0.46
LIMS2-217ENST00000545738 C2orf40Q9H1Z8 148 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 CXXC1Q9P0U4 656 aaPredicted RBP17.92■□□□□ 0.46
LIMS2-217ENST00000545738 KIAA1468Q9P260 1216 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 PIN4Q9Y237 131 aaKnown RBP17.92■□□□□ 0.46
LIMS2-217ENST00000545738 CNTNAP2Q9UHC6 1331 aa17.92■□□□□ 0.46
LIMS2-217ENST00000545738 ACKR2O00590 384 aa17.91■□□□□ 0.46
LIMS2-217ENST00000545738 PARNO95453 639 aaKnown RBP17.91■□□□□ 0.46
LIMS2-217ENST00000545738 EFNA5P52803 228 aa17.91■□□□□ 0.46
LIMS2-217ENST00000545738 KLHL40Q2TBA0 621 aa17.91■□□□□ 0.46
LIMS2-217ENST00000545738 UBXN11Q5T124 520 aa17.91■□□□□ 0.46
LIMS2-217ENST00000545738 RBM43Q6ZSC3 357 aaKnown RBP17.91■□□□□ 0.46
LIMS2-217ENST00000545738 OTOP2Q7RTS6 562 aa17.91■□□□□ 0.46
LIMS2-217ENST00000545738 MAP4K3Q8IVH8 894 aa17.91■□□□□ 0.46
LIMS2-217ENST00000545738 SMARCE1Q969G3 411 aa17.91■□□□□ 0.46
LIMS2-217ENST00000545738 ZBTB45Q96K62 511 aaPredicted RBP17.91■□□□□ 0.46
LIMS2-217ENST00000545738 GSDMAQ96QA5 445 aa17.91■□□□□ 0.46
LIMS2-217ENST00000545738 PRMT7Q9NVM4 692 aaPredicted RBP17.91■□□□□ 0.46
LIMS2-217ENST00000545738 MAPK8IP1Q9UQF2 711 aa17.91■□□□□ 0.46
LIMS2-217ENST00000545738 GPR182O15218 404 aa17.9■□□□□ 0.46
LIMS2-217ENST00000545738 PPIGQ13427 754 aaKnown RBP eCLIP17.9■□□□□ 0.46
LIMS2-217ENST00000545738 CAVIN1Q6NZI2 390 aaKnown RBP17.9■□□□□ 0.46
LIMS2-217ENST00000545738 CNKSR3Q6P9H4 555 aa17.9■□□□□ 0.46
LIMS2-217ENST00000545738 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.9■□□□□ 0.46
LIMS2-217ENST00000545738 TMCO2Q7Z6W1 182 aaPredicted RBP17.9■□□□□ 0.46
LIMS2-217ENST00000545738 EIF2AQ9BY44 585 aaKnown RBP17.9■□□□□ 0.46
LIMS2-217ENST00000545738 PDZD7Q9H5P4 517 aa17.9■□□□□ 0.46
LIMS2-217ENST00000545738 PTPRHQ9HD43 1115 aa17.9■□□□□ 0.46
LIMS2-217ENST00000545738 TTC3P53804 2025 aa17.9■□□□□ 0.46
LIMS2-217ENST00000545738 A0A1B0GUA9 196 aa17.89■□□□□ 0.46
LIMS2-217ENST00000545738 ANKRD63C9JTQ0 380 aa17.89■□□□□ 0.46
LIMS2-217ENST00000545738 ERLIN2O94905 339 aa17.89■□□□□ 0.46
LIMS2-217ENST00000545738 CD44P16070 742 aaKnown RBP17.89■□□□□ 0.46
LIMS2-217ENST00000545738 PRPF4BQ13523 1007 aaKnown RBP17.89■□□□□ 0.46
LIMS2-217ENST00000545738 SEPT8Q92599 483 aa17.89■□□□□ 0.46
LIMS2-217ENST00000545738 PRIMPOLQ96LW4 560 aa17.89■□□□□ 0.46
LIMS2-217ENST00000545738 ACO2Q99798 780 aaKnown RBP17.89■□□□□ 0.46
LIMS2-217ENST00000545738 ADAM2Q99965 735 aa17.89■□□□□ 0.46
LIMS2-217ENST00000545738 LBHD1Q9BQE6 289 aaPredicted RBP17.89■□□□□ 0.46
LIMS2-217ENST00000545738 PROZP22891 400 aa17.89■□□□□ 0.45
LIMS2-217ENST00000545738 DEFB103AP81534 67 aa17.89■□□□□ 0.45
LIMS2-217ENST00000545738 MORC3Q14149 939 aa17.89■□□□□ 0.45
LIMS2-217ENST00000545738 L1TD1Q5T7N2 865 aaKnown RBP17.89■□□□□ 0.45
LIMS2-217ENST00000545738 NELFCDQ8IXH7 590 aa17.89■□□□□ 0.45
LIMS2-217ENST00000545738 ZNF507Q8TCN5 953 aa17.89■□□□□ 0.45
LIMS2-217ENST00000545738 CCDC34Q96HJ3 373 aa17.89■□□□□ 0.45
LIMS2-217ENST00000545738 TSPYL2Q9H2G4 693 aaPredicted RBP17.89■□□□□ 0.45
LIMS2-217ENST00000545738 COL4A6Q14031 1691 aa17.89■□□□□ 0.45
LIMS2-217ENST00000545738 MEIS3P2A8K0S8 358 aa17.88■□□□□ 0.45
LIMS2-217ENST00000545738 ENPP3O14638 875 aa17.88■□□□□ 0.45
LIMS2-217ENST00000545738 TGFB1I1O43294 461 aa17.88■□□□□ 0.45
LIMS2-217ENST00000545738 SMC2O95347 1197 aa17.88■□□□□ 0.45
LIMS2-217ENST00000545738 ATF7P17544 494 aaPredicted RBP17.88■□□□□ 0.45
LIMS2-217ENST00000545738 ADSSP30520 456 aa17.88■□□□□ 0.45
LIMS2-217ENST00000545738 BMT2Q1RMZ1 405 aa17.88■□□□□ 0.45
LIMS2-217ENST00000545738 RPUSD2Q8IZ73 545 aaKnown RBP17.88■□□□□ 0.45
LIMS2-217ENST00000545738 CRIPAKQ8N1N5 446 aa17.88■□□□□ 0.45
LIMS2-217ENST00000545738 ZSWIM2Q8NEG5 633 aa17.88■□□□□ 0.45
LIMS2-217ENST00000545738 PRO3102Q9H379 93 aa17.88■□□□□ 0.45
LIMS2-217ENST00000545738 HOOK1Q9UJC3 728 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms