RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 TAX1BP1Q86VP1 789 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 OTUD6BQ8N6M0 293 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 TMC2Q8TDI7 906 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 ACER1Q8TDN7 264 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 CENPTQ96BT3 561 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 TRERF1Q96PN7 1200 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 GPR88Q9GZN0 384 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 PCYOX1Q9UHG3 505 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 LCMT1Q9UIC8 334 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 CTDP1Q9Y5B0 961 aaPredicted RBP14.07□□□□□ -0.16
CPSF7-223ENST00000544669 NFS1Q9Y697 457 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 EMSYQ7Z589 1322 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 ZSCAN5CA6NGD5 496 aaPredicted RBP14.06□□□□□ -0.16
CPSF7-223ENST00000544669 FOXN3O00409 490 aaPredicted RBP14.06□□□□□ -0.16
CPSF7-223ENST00000544669 DAPK3O43293 454 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 PHF2O75151 1096 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 ZC3H11AO75152 810 aaKnown RBP eCLIP14.06□□□□□ -0.16
CPSF7-223ENST00000544669 FTLP02792 175 aaPredicted RBP14.06□□□□□ -0.16
CPSF7-223ENST00000544669 NUDT17P0C025 328 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 SLURP2P0DP57 97 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 MXI1P50539 228 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 PPP2R2AP63151 447 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 DHX9Q08211 1270 aaKnown RBP14.06□□□□□ -0.16
CPSF7-223ENST00000544669 BYSLQ13895 437 aaKnown RBP14.06□□□□□ -0.16
CPSF7-223ENST00000544669 RRP1BQ14684 758 aaKnown RBP14.06□□□□□ -0.16
CPSF7-223ENST00000544669 ARHGAP44Q17R89 818 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 PHLDB3Q6NSJ2 640 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 HAUS6Q7Z4H7 955 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 DHX38Q92620 1227 aaKnown RBP14.06□□□□□ -0.16
CPSF7-223ENST00000544669 TRIM11Q96F44 468 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 AGO4Q9HCK5 861 aaKnown RBP14.06□□□□□ -0.16
CPSF7-223ENST00000544669 HSPBP1Q9NZL4 362 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 AJAP1Q9UKB5 411 aaPredicted RBP14.06□□□□□ -0.16
CPSF7-223ENST00000544669 SAMM50Q9Y512 469 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 ALG6Q9Y672 507 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 ZHX2Q9Y6X8 837 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 ADAMTSL1Q8N6G6 1762 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 WDR64B1ANS9 1081 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 KIAA0391O15091 583 aaKnown RBP14.06□□□□□ -0.16
CPSF7-223ENST00000544669 MEFVO15553 781 aaPredicted RBP14.06□□□□□ -0.16
CPSF7-223ENST00000544669 TTI1O43156 1089 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 PAEPP09466 180 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 ABCB4P21439 1286 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 NCKAP1LP55160 1127 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 ZNF844Q08AG5 666 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 PDCLQ13371 301 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 PRPF4BQ13523 1007 aaKnown RBP14.06□□□□□ -0.16
CPSF7-223ENST00000544669 MTMR1Q13613 665 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 KIAA1755Q5JYT7 1200 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 DUPD1Q68J44 220 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 KRT39Q6A163 491 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 SYDE1Q6ZW31 735 aaPredicted RBP14.06□□□□□ -0.16
CPSF7-223ENST00000544669 CYFIP1Q7L576 1253 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 FAM71AQ8IYT1 594 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 BANK1Q8NDB2 785 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 SPIRE2Q8WWL2 714 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 GMLQ99445 158 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 THAP2Q9H0W7 228 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 KIAA1586Q9HCI6 787 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 PPP1R9AQ9ULJ8 1098 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 COQ4Q9Y3A0 265 aa14.06□□□□□ -0.16
CPSF7-223ENST00000544669 COL11A2P13942 1736 aaPredicted RBP14.06□□□□□ -0.16
CPSF7-223ENST00000544669 GMNCA6NCL1 334 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 TRIM66O15016 1216 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 TRIM49P0CI25 452 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 TRIM49CP0CI26 452 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 ITGB5P18084 799 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 CTNNA2P26232 953 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 YWHABP31946 246 aaKnown RBP14.05□□□□□ -0.16
CPSF7-223ENST00000544669 ATP1A2P50993 1020 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 BPIFB4P59827 614 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 TNFAIP1Q13829 316 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 COG2Q14746 738 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 PLCB4Q15147 1175 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 TKFCQ3LXA3 575 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 C6orf118Q5T5N4 469 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 CEP128Q6ZU80 1094 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 NLRP14Q86W24 1093 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 DAW1Q8N136 415 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 PGM2Q96G03 612 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 ZSWIM1Q9BR11 485 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 PABPC3Q9H361 631 aaKnown RBP14.05□□□□□ -0.16
CPSF7-223ENST00000544669 OSGEPQ9NPF4 335 aa14.05□□□□□ -0.16
CPSF7-223ENST00000544669 ZBED4O75132 1171 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 MYBL1P10243 752 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 FNTAP49354 379 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 RTP1P59025 263 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 ZNF677Q86XU0 584 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 CCT8L2Q96SF2 557 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 CEP89Q96ST8 783 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 SENP7Q9BQF6 1050 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 NTPCRQ9BSD7 190 aaKnown RBP14.04□□□□□ -0.16
CPSF7-223ENST00000544669 TMEM109Q9BVC6 243 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 KIAA1683Q9H0B3 1180 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 TMEM8AQ9HCN3 771 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 HOMER3Q9NSC5 361 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 GTF3C4Q9UKN8 822 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 YDJCA8MPS7 323 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 DHX15O43143 795 aaKnown RBP14.04□□□□□ -0.16
CPSF7-223ENST00000544669 VCAM1P19320 739 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms