RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 GPR15P49685 360 aa4.71□□□□□ -1.66
SCFD1-207ENST00000544052 EPHB3P54753 998 aa4.71□□□□□ -1.66
SCFD1-207ENST00000544052 OS9Q13438 667 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-207ENST00000544052 NOMO1Q15155 1222 aa4.71□□□□□ -1.66
SCFD1-207ENST00000544052 DGKDQ16760 1214 aa4.71□□□□□ -1.66
SCFD1-207ENST00000544052 WDR72Q3MJ13 1102 aa4.71□□□□□ -1.66
SCFD1-207ENST00000544052 GRAMD4Q6IC98 578 aa4.71□□□□□ -1.66
SCFD1-207ENST00000544052 OTOP2Q7RTS6 562 aa4.71□□□□□ -1.66
SCFD1-207ENST00000544052 DENND1CQ8IV53 801 aa4.71□□□□□ -1.66
SCFD1-207ENST00000544052 MARCH10Q8NA82 808 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-207ENST00000544052 RAB24Q969Q5 203 aa4.71□□□□□ -1.66
SCFD1-207ENST00000544052 C11orf84Q9BUA3 381 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-207ENST00000544052 ZNF700Q9H0M5 742 aa4.71□□□□□ -1.66
SCFD1-207ENST00000544052 GREM2Q9H772 168 aa4.71□□□□□ -1.66
SCFD1-207ENST00000544052 MBD1Q9UIS9 605 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-207ENST00000544052 PCDHB1Q9Y5F3 818 aa4.71□□□□□ -1.66
SCFD1-207ENST00000544052 PCDHGB6Q9Y5F9 930 aa4.71□□□□□ -1.66
SCFD1-207ENST00000544052 COMMD10Q9Y6G5 202 aa4.71□□□□□ -1.66
SCFD1-207ENST00000544052 H3BML4 177 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 B3GALT2O43825 422 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 CUTAO60888 179 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 TMEM127O75204 238 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 TUSC2O75896 110 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 HNRNPLP14866 589 aaKnown RBP eCLIP4.7□□□□□ -1.663e-7■■□□□ 12.7
SCFD1-207ENST00000544052 XPAP23025 273 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-207ENST00000544052 STAT5BP51692 787 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 SMAD4Q13485 552 aaKnown RBP4.7□□□□□ -1.66
SCFD1-207ENST00000544052 SEPT2Q15019 361 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 C10orf62Q5T681 223 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-207ENST00000544052 PRR23BQ6ZRT6 265 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 B3GNT8Q7Z7M8 397 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 SKAP1Q86WV1 359 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 FAM129CQ86XR2 697 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 IGDCC3Q8IVU1 814 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 GLB1L2Q8IW92 636 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 CGRRF1Q99675 332 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 ADI1Q9BV57 179 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 APOL5Q9BWW9 433 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 B3GNT5Q9BYG0 378 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 MCOLN1Q9GZU1 580 aa4.7□□□□□ -1.66
SCFD1-207ENST00000544052 DTNBO60941 627 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 PHKG2P15735 406 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 LIMS1P48059 325 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 TARBP2Q15633 366 aaKnown RBP4.69□□□□□ -1.66
SCFD1-207ENST00000544052 ABHD15Q6UXT9 468 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 FAM43AQ8N2R8 423 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 ZBTB8AQ96BR9 441 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 CLIC6Q96NY7 704 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 NAA15Q9BXJ9 866 aaKnown RBP4.69□□□□□ -1.66
SCFD1-207ENST00000544052 BHMT2Q9H2M3 363 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 NSUN3Q9H649 340 aaKnown RBP4.69□□□□□ -1.66
SCFD1-207ENST00000544052 FAM204AQ9H8W3 233 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 POLR3BQ9NW08 1133 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-207ENST00000544052 CCDC88BA6NC98 1476 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 ANO9A1A5B4 782 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 LRRC14BA6NHZ5 514 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 BIN1O00499 593 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 MAFGO15525 162 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 LY86O95711 162 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 ZBED1O96006 694 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 SLC5A1P13866 664 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 IGFBP6P24592 240 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-207ENST00000544052 HTR1BP28222 390 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 ADSLP30566 484 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-207ENST00000544052 MLLT6P55198 1093 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-207ENST00000544052 FOXO4P98177 505 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 DSC2Q02487 901 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 MAP3K12Q12852 859 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 KIAA0753Q2KHM9 967 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 CCDC178Q5BJE1 867 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 TMEM132EQ6IEE7 984 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 SWSAP1Q6NVH7 229 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 KLHDC10Q6PID8 442 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 NPNTQ6UXI9 565 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 DPP8Q6V1X1 898 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-207ENST00000544052 RHOT1Q8IXI2 618 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 SMC5Q8IY18 1101 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 MZB1Q8WU39 189 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 FAM168AQ92567 244 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 HDAC10Q969S8 669 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 ARPC5LQ9BPX5 153 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 RBM12Q9NTZ6 932 aaKnown RBP4.69□□□□□ -1.66
SCFD1-207ENST00000544052 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.69□□□□□ -1.66
SCFD1-207ENST00000544052 TAGLN3Q9UI15 199 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 DAAM1Q9Y4D1 1078 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 NR2E3Q9Y5X4 410 aa4.69□□□□□ -1.66
SCFD1-207ENST00000544052 CARMIL2Q6F5E8 1435 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 A0A0G2JNJ9 132 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 FAM227AF5H4B4 570 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 AKR1B10O60218 316 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 NRP2O60462 931 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 KNG1P01042 644 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 COL6A1P12109 1028 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 CTSSP25774 331 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 SERPINB3P29508 390 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 WASP42768 502 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 MGAT2Q10469 447 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 Q6ZVL8 140 aa4.68□□□□□ -1.66
SCFD1-207ENST00000544052 SRGAP1Q7Z6B7 1085 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms