RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 SENP7Q9BQF6 1050 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 CBWD1Q9BRT8 395 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 RAVER2Q9HCJ3 691 aaKnown RBP7.09□□□□□ -1.27
PTPRO-208ENST00000542557 PXMP2Q9NR77 195 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 FAM153AQ9UHL3 310 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 TCEAL9Q9UHQ7 104 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 EXOC7Q9UPT5 735 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 SAMM50Q9Y512 469 aa7.09□□□□□ -1.27
PTPRO-208ENST00000542557 ARID2Q68CP9 1835 aa7.09□□□□□ -1.28
PTPRO-208ENST00000542557 KRIT1O00522 736 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 SART1O43290 800 aaKnown RBP7.08□□□□□ -1.28
PTPRO-208ENST00000542557 ZBED4O75132 1171 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 PPFIA4O75335 1185 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 VCAM1P19320 739 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 MXI1P50539 228 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 PPP3CAQ08209 521 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 PLS1Q14651 629 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 TTMPQ5BVD1 217 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 DNAAF5Q86Y56 855 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 MAP4K3Q8IVH8 894 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 ZBTB9Q96C00 473 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 TAAR1Q96RJ0 339 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 NAP1L3Q99457 506 aaPredicted RBP7.08□□□□□ -1.28
PTPRO-208ENST00000542557 C17orf75Q9HAS0 396 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 OSGEPQ9NPF4 335 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 PKD2L1Q9P0L9 805 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 LOC285556D6RIA3 1793 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 FOXN3O00409 490 aaPredicted RBP7.08□□□□□ -1.28
PTPRO-208ENST00000542557 BACH1O14867 736 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 MTA2O94776 668 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 EIF2AK2P19525 551 aaKnown RBP7.08□□□□□ -1.28
PTPRO-208ENST00000542557 RNASE9P60153 205 aaKnown RBP7.08□□□□□ -1.28
PTPRO-208ENST00000542557 DLG4P78352 724 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 UGCGQ16739 394 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 ARHGAP44Q17R89 818 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 ZNF746Q6NUN9 644 aaPredicted RBP7.08□□□□□ -1.28
PTPRO-208ENST00000542557 RNF207Q6ZRF8 634 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.08□□□□□ -1.28
PTPRO-208ENST00000542557 CPXCR1Q8N123 301 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 CNPY4Q8N129 248 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 CCDC26Q8TAB7 109 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 SPIRE2Q8WWL2 714 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 PIK3R5Q8WYR1 880 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 LRRC45Q96CN5 670 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 GPRASP2Q96D09 838 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 RMDN3Q96TC7 470 aa7.08□□□□□ -1.28
PTPRO-208ENST00000542557 UBE2TQ9NPD8 197 aaPredicted RBP7.08□□□□□ -1.28
PTPRO-208ENST00000542557 BRCA1P38398 1863 aaKnown RBP7.08□□□□□ -1.28
PTPRO-208ENST00000542557 MIF4GDA9UHW6 222 aaKnown RBP7.07□□□□□ -1.28
PTPRO-208ENST00000542557 DKC1O60832 514 aaKnown RBP eCLIP7.07□□□□□ -1.28
PTPRO-208ENST00000542557 LRRN2O75325 713 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 CCNE2O96020 404 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 PTENP60484 403 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 POU5F1Q01860 360 aaKnown RBP7.07□□□□□ -1.28
PTPRO-208ENST00000542557 MAEAQ7L5Y9 396 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 PALB2Q86YC2 1186 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 ARHGEF19Q8IW93 802 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 RDH13Q8NBN7 331 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 PLEKHO2Q8TD55 490 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 MORC4Q8TE76 937 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 KIFAP3Q92845 792 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 ARL8AQ96BM9 186 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 ARHGEF26Q96DR7 871 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 CAPS2Q9BXY5 557 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 MAF1Q9H063 256 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 TMEM117Q9H0C3 514 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 DDX47Q9H0S4 455 aaKnown RBP7.07□□□□□ -1.28
PTPRO-208ENST00000542557 THAP2Q9H0W7 228 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 PCIF1Q9H4Z3 704 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 COQ4Q9Y3A0 265 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 RLFQ13129 1914 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 GRIN2DO15399 1336 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 PHIPQ8WWQ0 1821 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 WDR81Q562E7 1941 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 ZNF233A6NK53 670 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 TISP43B9A030 160 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 VWA5AO00534 786 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 GZMAP12544 262 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 HSPA6P17066 643 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 ABCB4P21439 1286 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 GTF2H1P32780 548 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 ABCD1P33897 745 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 GCLMP48507 274 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 IRAK1P51617 712 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 GUCY2FP51841 1108 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 SMTNP53814 917 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 OAZ1P54368 228 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 PEX3P56589 373 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 MTMR3Q13615 1198 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 SPDYCQ5MJ68 293 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 KDM7AQ6ZMT4 941 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 SRLQ86TD4 932 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 FAM71AQ8IYT1 594 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 GPATCH11Q8N954 259 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 TMEM161BQ8NDZ6 487 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 TMC2Q8TDI7 906 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 SHC3Q92529 594 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 FBXL18Q96ME1 805 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 TRERF1Q96PN7 1200 aa7.07□□□□□ -1.28
PTPRO-208ENST00000542557 NTPCRQ9BSD7 190 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms