RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 BUB1O43683 1085 aa18.77■□□□□ 0.6
TMEM50B-210ENST00000542230 WNT7BP56706 349 aa18.77■□□□□ 0.6
TMEM50B-210ENST00000542230 MKRN4PQ13434 485 aaPredicted RBP18.77■□□□□ 0.6
TMEM50B-210ENST00000542230 DRAP1Q14919 205 aaPredicted RBP18.77■□□□□ 0.6
TMEM50B-210ENST00000542230 IFT74Q96LB3 600 aa18.77■□□□□ 0.6
TMEM50B-210ENST00000542230 TMEM117Q9H0C3 514 aa18.77■□□□□ 0.6
TMEM50B-210ENST00000542230 C17orf75Q9HAS0 396 aa18.77■□□□□ 0.6
TMEM50B-210ENST00000542230 MYO1AQ9UBC5 1043 aa18.77■□□□□ 0.6
TMEM50B-210ENST00000542230 CDC23Q9UJX2 597 aa18.77■□□□□ 0.6
TMEM50B-210ENST00000542230 GJB1P08034 283 aa18.77■□□□□ 0.6
TMEM50B-210ENST00000542230 ARL2P36404 184 aa18.77■□□□□ 0.6
TMEM50B-210ENST00000542230 GTF2A2P52657 109 aa18.77■□□□□ 0.6
TMEM50B-210ENST00000542230 MAP2K1Q02750 393 aaPredicted RBP18.77■□□□□ 0.6
TMEM50B-210ENST00000542230 SLC18A3Q16572 532 aa18.77■□□□□ 0.6
TMEM50B-210ENST00000542230 LRRC71Q8N4P6 559 aa18.77■□□□□ 0.6
TMEM50B-210ENST00000542230 OLIG1Q8TAK6 271 aa18.77■□□□□ 0.6
TMEM50B-210ENST00000542230 SLC7A3Q8WY07 619 aa18.77■□□□□ 0.6
TMEM50B-210ENST00000542230 BICD1Q96G01 975 aa18.77■□□□□ 0.6
TMEM50B-210ENST00000542230 F8VZ95 297 aa18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 NOP56O00567 594 aaKnown RBP18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 DHX37Q8IY37 1157 aaKnown RBP18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 TMEM174Q8WUU8 243 aa18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 SEMA4DQ92854 862 aa18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 SECISBP2LQ93073 1101 aaKnown RBP18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 SUGCTQ9HAC7 445 aa18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 PNMA3Q9UL41 463 aa18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 EXOC7Q9UPT5 735 aa18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 LRRIQ3A6PVS8 624 aaPredicted RBP18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 EVI5O60447 810 aa18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 RTP1P59025 263 aa18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 ZBTB41Q5SVQ8 909 aa18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 SPRYD7Q5W111 196 aa18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 LMBRD2Q68DH5 695 aaPredicted RBP18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 EHBP1Q8NDI1 1231 aa18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 AFAP1L1Q8TED9 768 aa18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 FAM213AQ9BRX8 229 aa18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 APEX2Q9UBZ4 518 aa18.76■□□□□ 0.59
TMEM50B-210ENST00000542230 FOXN3O00409 490 aaPredicted RBP18.75■□□□□ 0.59
TMEM50B-210ENST00000542230 ZNF185O15231 689 aa18.75■□□□□ 0.59
TMEM50B-210ENST00000542230 CAPSQ13938 189 aa18.75■□□□□ 0.59
TMEM50B-210ENST00000542230 ZNF792Q3KQV3 632 aa18.75■□□□□ 0.59
TMEM50B-210ENST00000542230 SEZ6Q53EL9 994 aa18.75■□□□□ 0.59
TMEM50B-210ENST00000542230 MORC4Q8TE76 937 aa18.75■□□□□ 0.59
TMEM50B-210ENST00000542230 PARD3BQ8TEW8 1205 aa18.75■□□□□ 0.59
TMEM50B-210ENST00000542230 PRPF31Q8WWY3 499 aaKnown RBP18.75■□□□□ 0.59
TMEM50B-210ENST00000542230 AZI2Q9H6S1 392 aa18.75■□□□□ 0.59
TMEM50B-210ENST00000542230 FBXL5Q9UKA1 691 aa18.75■□□□□ 0.59
TMEM50B-210ENST00000542230 DLATP10515 647 aaKnown RBP18.75■□□□□ 0.59
TMEM50B-210ENST00000542230 KLRC1P26715 233 aa18.75■□□□□ 0.59
TMEM50B-210ENST00000542230 EPC2Q52LR7 807 aa18.75■□□□□ 0.59
TMEM50B-210ENST00000542230 SLC17A8Q8NDX2 589 aa18.75■□□□□ 0.59
TMEM50B-210ENST00000542230 SHCBP1Q8NEM2 672 aa18.75■□□□□ 0.59
TMEM50B-210ENST00000542230 UBE2TQ9NPD8 197 aaPredicted RBP18.75■□□□□ 0.59
TMEM50B-210ENST00000542230 NRBP2Q9NSY0 501 aa18.75■□□□□ 0.59
TMEM50B-210ENST00000542230 CGNQ9P2M7 1197 aaKnown RBP18.75■□□□□ 0.59
TMEM50B-210ENST00000542230 COPB2P35606 906 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 ACOT2P49753 483 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 PLCB4Q15147 1175 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 TEX35Q5T0J7 233 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 FAM160B1Q5W0V3 765 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 TAPT1Q6NXT6 567 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 FBXO38Q6PIJ6 1188 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 MAMDC4Q6UXC1 1216 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 C2orf69Q8N8R5 385 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 TARS2Q9BW92 718 aaKnown RBP18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 STK33Q9BYT3 514 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 ACP6Q9NPH0 428 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 MYO6Q9UM54 1294 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 NCK2O43639 380 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 NLRP11P59045 1033 aaKnown RBP18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 KIAA0753Q2KHM9 967 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 BRDTQ58F21 947 aaPredicted RBP18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 SCARA3Q6AZY7 606 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 TRAPPC11Q7Z392 1133 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 CAPZA3Q96KX2 299 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 FBXL18Q96ME1 805 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 PSMB7Q99436 277 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 RNPEPQ9H4A4 650 aa18.74■□□□□ 0.59
TMEM50B-210ENST00000542230 DOCK3Q8IZD9 2030 aa18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 DDX3XO00571 662 aaKnown RBP eCLIP18.73■□□□□ 0.593e-19■■■■■ 47.4
TMEM50B-210ENST00000542230 PJA2O43164 708 aa18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 MAFO75444 373 aaPredicted RBP18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 ZSCAN20P17040 1043 aaPredicted RBP18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 SOX5P35711 763 aa18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 ADCYAP1R1P41586 468 aa18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 MXI1P50539 228 aa18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 PALB2Q86YC2 1186 aa18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 DEPTORQ8TB45 409 aa18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 UBXN4Q92575 508 aa18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 HVCN1Q96D96 273 aa18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 LGR5O75473 907 aa18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 SRGAP2CP0DJJ0 459 aa18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 PRKCIP41743 596 aa18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 LIG4P49917 911 aa18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 CYP24A1Q07973 514 aa18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 RSRC2Q7L4I2 434 aaKnown RBP18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 PDCL2Q8N4E4 241 aa18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 LNX1Q8TBB1 728 aaPredicted RBP18.73■□□□□ 0.59
TMEM50B-210ENST00000542230 TAS1R2Q8TE23 839 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms