RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 NBPF9Q3BBW0 867 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 CBWD6Q4V339 395 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 ZC2HC1CQ53FD0 456 aaPredicted RBP7.31□□□□□ -1.24
NKRF-204ENST00000542113 CBWD3Q5JTY5 395 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 CBWD5Q5RIA9 395 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 ERMARDQ5T6L9 678 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 FBXW10Q5XX13 1052 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 CEP128Q6ZU80 1094 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 SYDE1Q6ZW31 735 aaPredicted RBP7.31□□□□□ -1.24
NKRF-204ENST00000542113 SIAH1Q8IUQ4 282 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 ZFPM1Q8IX07 1006 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 CCDC13Q8IYE1 715 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 XXYLT1Q8NBI6 393 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 FLAD1Q8NFF5 587 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 KIFAP3Q92845 792 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 HVCN1Q96D96 273 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 FIZ1Q96SL8 496 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 LXNQ9BS40 222 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 TRIM51Q9BSJ1 452 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 WDR18Q9BV38 432 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 THAP2Q9H0W7 228 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 KDM4CQ9H3R0 1056 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 DNAJC5Q9H3Z4 198 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 ZDHHC18Q9NUE0 388 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 SAMD15Q9P1V8 674 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 DDX20Q9UHI6 824 aaKnown RBP7.31□□□□□ -1.24
NKRF-204ENST00000542113 DBR1Q9UK59 544 aaKnown RBP7.31□□□□□ -1.24
NKRF-204ENST00000542113 SFI1A8K8P3 1242 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 OPLAHO14841 1288 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 KIAA0391O15091 583 aaKnown RBP7.31□□□□□ -1.24
NKRF-204ENST00000542113 ASAP2O43150 1006 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 CTNND1O60716 968 aaKnown RBP7.31□□□□□ -1.24
NKRF-204ENST00000542113 HIP1RO75146 1068 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 P4HBP07237 508 aaKnown RBP7.31□□□□□ -1.24
NKRF-204ENST00000542113 GSTA1P08263 222 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 CTNNA2P26232 953 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 MXI1P50539 228 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 PLTPP55058 493 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 MFAP3P55082 362 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 ITIH4Q14624 930 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 PTPROQ16827 1216 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 DACT2Q5SW24 774 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 PLCD4Q9BRC7 762 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 STRA6Q9BX79 667 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 TRIM31Q9BZY9 425 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 GPR88Q9GZN0 384 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 RANBP17Q9H2T7 1088 aaKnown RBP7.31□□□□□ -1.24
NKRF-204ENST00000542113 ST6GALNAC4Q9H4F1 302 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 UBE2TQ9NPD8 197 aaPredicted RBP7.31□□□□□ -1.24
NKRF-204ENST00000542113 HOMER3Q9NSC5 361 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 TCEAL9Q9UHQ7 104 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 SIPA1L1O43166 1804 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 EMSYQ7Z589 1322 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 IPO5O00410 1097 aaKnown RBP7.31□□□□□ -1.24
NKRF-204ENST00000542113 SPOPO43791 374 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 ONECUT3O60422 494 aaPredicted RBP7.31□□□□□ -1.24
NKRF-204ENST00000542113 FTLP02792 175 aaPredicted RBP7.31□□□□□ -1.24
NKRF-204ENST00000542113 RARGP13631 454 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 MMP13P45452 471 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 CYP1B1Q16678 543 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 PADI6Q6TGC4 694 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 TRMT10CQ7L0Y3 403 aaKnown RBP7.31□□□□□ -1.24
NKRF-204ENST00000542113 MIER3Q7Z3K6 550 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 ARHGEF26Q96DR7 871 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 CSRNP1Q96S65 589 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 DEFB129Q9H1M3 183 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 CCDC134Q9H6E4 229 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 KLC4Q9NSK0 619 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 GTF3C4Q9UKN8 822 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 PNMA2Q9UL42 364 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 TMX2Q9Y320 296 aa7.31□□□□□ -1.24
NKRF-204ENST00000542113 ZNF536O15090 1300 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 IGSF9BQ9UPX0 1349 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 EP400Q96L91 3159 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 FAM196BA6NMK8 535 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 FOXN3O00409 490 aaPredicted RBP7.3□□□□□ -1.24
NKRF-204ENST00000542113 LRRN2O75325 713 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 MMEP08473 750 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 CAV1Q03135 178 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 ENPEPQ07075 957 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 EPC2Q52LR7 807 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 FAM182BQ5T319 152 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 DCAF12L1Q5VU92 463 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 CCDC137Q6PK04 289 aaKnown RBP7.3□□□□□ -1.24
NKRF-204ENST00000542113 CCDC105Q8IYK2 499 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 SAMD3Q8N6K7 520 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 C12orf50Q8NA57 414 aaPredicted RBP7.3□□□□□ -1.24
NKRF-204ENST00000542113 SUPT20HQ8NEM7 779 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 OLIG1Q8TAK6 271 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 CYP2W1Q8TAV3 490 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 GRK7Q8WTQ7 553 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 HOOK2Q96ED9 719 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 TRIM11Q96F44 468 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 SELENOSQ9BQE4 189 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 UNC45AQ9H3U1 944 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 DBNDD1Q9H9R9 158 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 ECE2O60344 883 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 LYPLA2O95372 231 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 ECEL1O95672 775 aa7.3□□□□□ -1.24
NKRF-204ENST00000542113 PLS3P13797 630 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms