RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 BROXQ5VW32 411 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 CCDC62Q6P9F0 684 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 C11orf74Q86VG3 221 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 CDYL2Q8N8U2 506 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 OR5M3Q8NGP4 307 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 VOPP1Q96AW1 172 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 ZNF512Q96ME7 567 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-210ENST00000541488 PRDM12Q9H4Q4 367 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 EMC7Q9NPA0 242 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 PLAAQ9Y263 795 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 A0A087X0B3 334 aa5.6□□□□□ -1.51
PRKDC-210ENST00000541488 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
PRKDC-210ENST00000541488 GSG1L2A8MUP6 293 aa5.6□□□□□ -1.51
PRKDC-210ENST00000541488 LY86O95711 162 aa5.6□□□□□ -1.51
PRKDC-210ENST00000541488 LPLP06858 475 aa5.6□□□□□ -1.51
PRKDC-210ENST00000541488 PFKMP08237 780 aa5.6□□□□□ -1.51
PRKDC-210ENST00000541488 LSSP48449 732 aa5.6□□□□□ -1.51
PRKDC-210ENST00000541488 MAN2A2P49641 1150 aa5.6□□□□□ -1.51
PRKDC-210ENST00000541488 OCRLQ01968 901 aa5.6□□□□□ -1.51
PRKDC-210ENST00000541488 CSRP2Q16527 193 aa5.6□□□□□ -1.51
PRKDC-210ENST00000541488 MAN2A1Q16706 1144 aa5.6□□□□□ -1.51
PRKDC-210ENST00000541488 KIAA0907Q7Z7F0 614 aaPredicted RBP5.6□□□□□ -1.51
PRKDC-210ENST00000541488 CXorf67Q86X51 503 aaPredicted RBP5.6□□□□□ -1.51
PRKDC-210ENST00000541488 AMER2Q8N7J2 671 aa5.6□□□□□ -1.51
PRKDC-210ENST00000541488 ZNF610Q8N9Z0 462 aa5.6□□□□□ -1.51
PRKDC-210ENST00000541488 GAB3Q8WWW8 586 aa5.6□□□□□ -1.51
PRKDC-210ENST00000541488 CLIP3Q96DZ5 547 aa5.6□□□□□ -1.51
PRKDC-210ENST00000541488 FDXACB1Q9BRP7 624 aaPredicted RBP5.6□□□□□ -1.51
PRKDC-210ENST00000541488 TRIM8Q9BZR9 551 aa5.6□□□□□ -1.51
PRKDC-210ENST00000541488 PARPBPQ9NWS1 579 aa5.6□□□□□ -1.51
PRKDC-210ENST00000541488 MFAP3LO75121 409 aa5.59□□□□□ -1.51
PRKDC-210ENST00000541488 GNAT2P19087 354 aa5.59□□□□□ -1.51
PRKDC-210ENST00000541488 XPAP23025 273 aaPredicted RBP5.59□□□□□ -1.51
PRKDC-210ENST00000541488 MCM7P33993 719 aa5.59□□□□□ -1.51
PRKDC-210ENST00000541488 GYS2P54840 703 aa5.59□□□□□ -1.51
PRKDC-210ENST00000541488 SLC25A3Q00325 362 aa5.59□□□□□ -1.51
PRKDC-210ENST00000541488 SPIDRQ14159 915 aa5.59□□□□□ -1.51
PRKDC-210ENST00000541488 ATP13A4Q4VNC1 1196 aa5.59□□□□□ -1.51
PRKDC-210ENST00000541488 CT83Q5H943 113 aa5.59□□□□□ -1.51
PRKDC-210ENST00000541488 HDGFL2Q7Z4V5 671 aaPredicted RBP5.59□□□□□ -1.51
PRKDC-210ENST00000541488 MSL3Q8N5Y2 521 aaKnown RBP5.59□□□□□ -1.51
PRKDC-210ENST00000541488 SLC5A5Q92911 643 aa5.59□□□□□ -1.51
PRKDC-210ENST00000541488 USP7Q93009 1102 aa5.59□□□□□ -1.51
PRKDC-210ENST00000541488 CRAMP1Q96RY5 1269 aa5.59□□□□□ -1.51
PRKDC-210ENST00000541488 NOC2LQ9Y3T9 749 aaKnown RBP5.59□□□□□ -1.51
PRKDC-210ENST00000541488 CANXP27824 592 aaKnown RBP5.58□□□□□ -1.52
PRKDC-210ENST00000541488 PTTG1IPP53801 180 aa5.58□□□□□ -1.52
PRKDC-210ENST00000541488 MANFP55145 182 aaKnown RBP5.58□□□□□ -1.52
PRKDC-210ENST00000541488 STRN3Q13033 797 aa5.58□□□□□ -1.52
PRKDC-210ENST00000541488 TRIM25Q14258 630 aaKnown RBP5.58□□□□□ -1.52
PRKDC-210ENST00000541488 LMBR1LQ6UX01 489 aa5.58□□□□□ -1.52
PRKDC-210ENST00000541488 FRMD7Q6ZUT3 714 aa5.58□□□□□ -1.52
PRKDC-210ENST00000541488 XYLT1Q86Y38 959 aa5.58□□□□□ -1.52
PRKDC-210ENST00000541488 ZNF483Q8TF39 744 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-210ENST00000541488 MNTQ99583 582 aa5.58□□□□□ -1.52
PRKDC-210ENST00000541488 CPPED1Q9BRF8 314 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-210ENST00000541488 OSBPL6Q9BZF3 934 aa5.58□□□□□ -1.52
PRKDC-210ENST00000541488 USP36Q9P275 1121 aaKnown RBP5.58□□□□□ -1.52
PRKDC-210ENST00000541488 EVLQ9UI08 416 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-210ENST00000541488 A0A087X1B8 175 aa5.57□□□□□ -1.52
PRKDC-210ENST00000541488 KLRG2A4D1S0 409 aaPredicted RBP5.57□□□□□ -1.52
PRKDC-210ENST00000541488 PRAMEF4O60810 478 aa5.57□□□□□ -1.52
PRKDC-210ENST00000541488 ADH4P08319 380 aa5.57□□□□□ -1.52
PRKDC-210ENST00000541488 IL12RB1P42701 662 aa5.57□□□□□ -1.52
PRKDC-210ENST00000541488 RABGGTBP53611 331 aa5.57□□□□□ -1.52
PRKDC-210ENST00000541488 PHC1P78364 1004 aa5.57□□□□□ -1.52
PRKDC-210ENST00000541488 GPR158Q5T848 1215 aa5.57□□□□□ -1.52
PRKDC-210ENST00000541488 C1QL3Q5VWW1 255 aa5.57□□□□□ -1.52
PRKDC-210ENST00000541488 MFSD5Q6N075 450 aa5.57□□□□□ -1.52
PRKDC-210ENST00000541488 UNC5BQ8IZJ1 945 aa5.57□□□□□ -1.52
PRKDC-210ENST00000541488 NRDE2Q9H7Z3 1164 aa5.57□□□□□ -1.52
PRKDC-210ENST00000541488 AURKAIP1Q9NWT8 199 aaPredicted RBP5.57□□□□□ -1.52
PRKDC-210ENST00000541488 TBX22Q9Y458 520 aa5.57□□□□□ -1.52
PRKDC-210ENST00000541488 XDHP47989 1333 aa5.56□□□□□ -1.52
PRKDC-210ENST00000541488 NEMP1O14524 444 aa5.56□□□□□ -1.52
PRKDC-210ENST00000541488 ENPP3O14638 875 aa5.56□□□□□ -1.52
PRKDC-210ENST00000541488 CCT2P78371 535 aaKnown RBP5.56□□□□□ -1.52
PRKDC-210ENST00000541488 TOB2Q14106 344 aaPredicted RBP5.56□□□□□ -1.52
PRKDC-210ENST00000541488 PDCD1Q15116 288 aa5.56□□□□□ -1.52
PRKDC-210ENST00000541488 DPY19L2P1Q6NXN4 242 aa5.56□□□□□ -1.52
PRKDC-210ENST00000541488 ZNF662Q6ZS27 426 aa5.56□□□□□ -1.52
PRKDC-210ENST00000541488 STRA8Q7Z7C7 330 aa5.56□□□□□ -1.52
PRKDC-210ENST00000541488 PPP1R14CQ8TAE6 165 aa5.56□□□□□ -1.52
PRKDC-210ENST00000541488 ST8SIA2Q92186 375 aa5.56□□□□□ -1.52
PRKDC-210ENST00000541488 LARP4BQ92615 738 aaKnown RBP5.56□□□□□ -1.52
PRKDC-210ENST00000541488 ZG16BQ96DA0 208 aa5.56□□□□□ -1.52
PRKDC-210ENST00000541488 ZNF703Q9H7S9 590 aaPredicted RBP5.56□□□□□ -1.52
PRKDC-210ENST00000541488 PRSS50Q9UI38 385 aa5.56□□□□□ -1.52
PRKDC-210ENST00000541488 KCNG1Q9UIX4 513 aa5.56□□□□□ -1.52
PRKDC-210ENST00000541488 TMPRSS11EQ9UL52 423 aa5.56□□□□□ -1.52
PRKDC-210ENST00000541488 SORCS3Q9UPU3 1222 aa5.56□□□□□ -1.52
PRKDC-210ENST00000541488 HOXA3O43365 443 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-210ENST00000541488 IPO13O94829 963 aaKnown RBP5.55□□□□□ -1.52
PRKDC-210ENST00000541488 SEC24DO94855 1032 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-210ENST00000541488 MAKP20794 623 aa5.55□□□□□ -1.52
PRKDC-210ENST00000541488 INHBCP55103 352 aa5.55□□□□□ -1.52
PRKDC-210ENST00000541488 LGALS4P56470 323 aa5.55□□□□□ -1.52
PRKDC-210ENST00000541488 NRG3P56975 720 aa5.55□□□□□ -1.52
PRKDC-210ENST00000541488 DUSP2Q05923 314 aa5.55□□□□□ -1.52
PRKDC-210ENST00000541488 UBE3CQ15386 1083 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms