RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 MRPL10Q7Z7H8 261 aaKnown RBP13.97□□□□□ -0.17
COPS7A-211ENST00000540408 ZNF280BQ86YH2 543 aa13.97□□□□□ -0.17
COPS7A-211ENST00000540408 PSPC1Q8WXF1 523 aaKnown RBP13.97□□□□□ -0.17
COPS7A-211ENST00000540408 NKD2Q969F2 451 aaPredicted RBP13.97□□□□□ -0.17
COPS7A-211ENST00000540408 CEP170P1Q96L14 293 aa13.97□□□□□ -0.17
COPS7A-211ENST00000540408 RTP3Q9BQQ7 232 aa13.97□□□□□ -0.17
COPS7A-211ENST00000540408 SMOC2Q9H3U7 446 aa13.97□□□□□ -0.17
COPS7A-211ENST00000540408 IFT122Q9HBG6 1241 aa13.97□□□□□ -0.17
COPS7A-211ENST00000540408 IGSF9Q9P2J2 1179 aa13.97□□□□□ -0.17
COPS7A-211ENST00000540408 WDR81Q562E7 1941 aa13.96□□□□□ -0.17
COPS7A-211ENST00000540408 MEIS3P2A8K0S8 358 aa13.96□□□□□ -0.17
COPS7A-211ENST00000540408 NRP1O14786 923 aa13.96□□□□□ -0.17
COPS7A-211ENST00000540408 ASAP2O43150 1006 aa13.96□□□□□ -0.17
COPS7A-211ENST00000540408 NR1I2O75469 434 aa13.96□□□□□ -0.17
COPS7A-211ENST00000540408 DDHD2O94830 711 aa13.96□□□□□ -0.17
COPS7A-211ENST00000540408 URODP06132 367 aa13.96□□□□□ -0.17
COPS7A-211ENST00000540408 P4HBP07237 508 aaKnown RBP13.96□□□□□ -0.17
COPS7A-211ENST00000540408 CNPP09543 421 aaKnown RBP13.96□□□□□ -0.17
COPS7A-211ENST00000540408 CLCN4P51793 760 aa13.96□□□□□ -0.17
COPS7A-211ENST00000540408 LETM2Q2VYF4 491 aa13.96□□□□□ -0.17
COPS7A-211ENST00000540408 PLA2G4FQ68DD2 849 aa13.96□□□□□ -0.17
COPS7A-211ENST00000540408 CYP26C1Q6V0L0 522 aa13.96□□□□□ -0.17
COPS7A-211ENST00000540408 AGMOQ6ZNB7 445 aa13.96□□□□□ -0.17
COPS7A-211ENST00000540408 KRT25Q7Z3Z0 450 aa13.96□□□□□ -0.17
COPS7A-211ENST00000540408 DAGLBQ8NCG7 672 aa13.96□□□□□ -0.17
COPS7A-211ENST00000540408 ETNPPLQ8TBG4 499 aa13.96□□□□□ -0.17
COPS7A-211ENST00000540408 BCL7CQ8WUZ0 217 aaPredicted RBP13.96□□□□□ -0.17
COPS7A-211ENST00000540408 TCP11Q8WWU5 503 aa13.96□□□□□ -0.17
COPS7A-211ENST00000540408 PRPF31Q8WWY3 499 aaKnown RBP13.96□□□□□ -0.17
COPS7A-211ENST00000540408 STAMQ92783 540 aa13.96□□□□□ -0.17
COPS7A-211ENST00000540408 FAM20AQ96MK3 541 aa13.96□□□□□ -0.17
COPS7A-211ENST00000540408 CCDC194A0A1B0GVG4 234 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 PRR23AA6NEV1 266 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 STK25O00506 426 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 C2CD2LO14523 706 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 GAS2O43903 313 aaKnown RBP13.95□□□□□ -0.18
COPS7A-211ENST00000540408 ERLIN2O94905 339 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 POMCP01189 267 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 SOD2P04179 222 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 ADH1AP07327 375 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 ITGA4P13612 1032 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 XBP1P17861 261 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 RFC5P40937 340 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 AK2P54819 239 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 PPP2R5CQ13362 524 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 PCBP1Q15365 356 aaKnown RBP eCLIP13.95□□□□□ -0.18
COPS7A-211ENST00000540408 INF2Q27J81 1249 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 RUFY3Q7L099 469 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 ASCL5Q7RTU5 278 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 SKAP1Q86WV1 359 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 ZNF274Q96GC6 653 aaPredicted RBP13.95□□□□□ -0.18
COPS7A-211ENST00000540408 MBOAT7Q96N66 472 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 NAP1L4Q99733 375 aaKnown RBP13.95□□□□□ -0.18
COPS7A-211ENST00000540408 KCNK12Q9HB15 430 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 DUSP12Q9UNI6 340 aa13.95□□□□□ -0.18
COPS7A-211ENST00000540408 LILRB3O75022 631 aa13.94□□□□□ -0.18
COPS7A-211ENST00000540408 GCFC2P16383 781 aaKnown RBP13.94□□□□□ -0.18
COPS7A-211ENST00000540408 NCLP19338 710 aaKnown RBP13.94□□□□□ -0.18
COPS7A-211ENST00000540408 AOC1P19801 751 aa13.94□□□□□ -0.18
COPS7A-211ENST00000540408 RFX1P22670 979 aa13.94□□□□□ -0.18
COPS7A-211ENST00000540408 AXLP30530 894 aa13.94□□□□□ -0.18
COPS7A-211ENST00000540408 GBP2P32456 591 aaPredicted RBP13.94□□□□□ -0.18
COPS7A-211ENST00000540408 OR1G1P47890 313 aa13.94□□□□□ -0.18
COPS7A-211ENST00000540408 NPEPPSP55786 919 aa13.94□□□□□ -0.18
COPS7A-211ENST00000540408 LAMTOR4Q0VGL1 99 aa13.94□□□□□ -0.18
COPS7A-211ENST00000540408 HACE1Q8IYU2 909 aa13.94□□□□□ -0.18
COPS7A-211ENST00000540408 TMEM143Q96AN5 459 aa13.94□□□□□ -0.18
COPS7A-211ENST00000540408 VN1R3Q9BXE9 311 aa13.94□□□□□ -0.18
COPS7A-211ENST00000540408 DHX33Q9H6R0 707 aaKnown RBP13.94□□□□□ -0.18
COPS7A-211ENST00000540408 MAN1C1Q9NR34 630 aa13.94□□□□□ -0.18
COPS7A-211ENST00000540408 CYP46A1Q9Y6A2 500 aa13.94□□□□□ -0.18
COPS7A-211ENST00000540408 USP34Q70CQ2 3546 aa13.94□□□□□ -0.18
COPS7A-211ENST00000540408 CCDC195A0A1B0GUA6 201 aa13.93□□□□□ -0.18
COPS7A-211ENST00000540408 M0R2N6 131 aa13.93□□□□□ -0.18
COPS7A-211ENST00000540408 EML1O00423 815 aa13.93□□□□□ -0.18
COPS7A-211ENST00000540408 CCNT1O60563 726 aaKnown RBP13.93□□□□□ -0.18
COPS7A-211ENST00000540408 GLUD1P00367 558 aa13.93□□□□□ -0.18
COPS7A-211ENST00000540408 HOXA11P31270 313 aaPredicted RBP13.93□□□□□ -0.18
COPS7A-211ENST00000540408 YWHABP31946 246 aaKnown RBP13.93□□□□□ -0.18
COPS7A-211ENST00000540408 MXD4Q14582 209 aaPredicted RBP13.93□□□□□ -0.18
COPS7A-211ENST00000540408 EPHA7Q15375 998 aa13.93□□□□□ -0.18
COPS7A-211ENST00000540408 XKR9Q5GH70 373 aa13.93□□□□□ -0.18
COPS7A-211ENST00000540408 PPP4R3AQ6IN85 833 aa13.93□□□□□ -0.18
COPS7A-211ENST00000540408 NOTUMQ6P988 496 aa13.93□□□□□ -0.18
COPS7A-211ENST00000540408 FRMD5Q7Z6J6 570 aa13.93□□□□□ -0.18
COPS7A-211ENST00000540408 NEK8Q86SG6 692 aa13.93□□□□□ -0.18
COPS7A-211ENST00000540408 C4orf19Q8IY42 314 aa13.93□□□□□ -0.18
COPS7A-211ENST00000540408 SIX5Q8N196 739 aa13.93□□□□□ -0.18
COPS7A-211ENST00000540408 RNF149Q8NC42 400 aa13.93□□□□□ -0.18
COPS7A-211ENST00000540408 CMASQ8NFW8 434 aaPredicted RBP13.93□□□□□ -0.18
COPS7A-211ENST00000540408 RPS6KC1Q96S38 1066 aa13.93□□□□□ -0.18
COPS7A-211ENST00000540408 ZSWIM6Q9HCJ5 1215 aa13.93□□□□□ -0.18
COPS7A-211ENST00000540408 TBX3O15119 743 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 SLC37A4O43826 429 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 B4GALT3O60512 393 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 CDKL5O76039 1030 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 BAG4O95429 457 aaKnown RBP13.92□□□□□ -0.18
COPS7A-211ENST00000540408 GLUD2P49448 558 aa13.92□□□□□ -0.18
COPS7A-211ENST00000540408 AFF1P51825 1210 aaKnown RBP13.92□□□□□ -0.18
COPS7A-211ENST00000540408 STK3Q13188 491 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms