RNA–Protein interactions for RNA: ENST00000540269.6

USP10-202, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 1 (best)

Gene USP10, Length 3,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-202ENST00000540269 KREMEN1Q96MU8 473 aa13.42□□□□□ -0.26
USP10-202ENST00000540269 SUCLA2Q9P2R7 463 aaPredicted RBP13.42□□□□□ -0.26
USP10-202ENST00000540269 PPP1R1BQ9UD71 204 aaPredicted RBP13.42□□□□□ -0.26
USP10-202ENST00000540269 INTUQ9ULD6 942 aa13.42□□□□□ -0.26
USP10-202ENST00000540269 CALCAP01258 141 aa13.42□□□□□ -0.26
USP10-202ENST00000540269 KRT14P02533 472 aa13.42□□□□□ -0.26
USP10-202ENST00000540269 KRT13P13646 458 aa13.42□□□□□ -0.26
USP10-202ENST00000540269 LMNB1P20700 586 aa13.42□□□□□ -0.26
USP10-202ENST00000540269 NPTX2P47972 431 aa13.42□□□□□ -0.26
USP10-202ENST00000540269 PSMC5P62195 406 aa13.42□□□□□ -0.26
USP10-202ENST00000540269 IRX3P78415 501 aaPredicted RBP13.42□□□□□ -0.26
USP10-202ENST00000540269 SP4Q02446 784 aa13.42□□□□□ -0.26
USP10-202ENST00000540269 NAA35Q5VZE5 725 aa13.42□□□□□ -0.26
USP10-202ENST00000540269 INTS8Q75QN2 995 aaKnown RBP13.42□□□□□ -0.26
USP10-202ENST00000540269 C12orf56Q8IXR9 622 aa13.42□□□□□ -0.26
USP10-202ENST00000540269 SH2D3CQ8N5H7 860 aa13.42□□□□□ -0.26
USP10-202ENST00000540269 RFFLQ8WZ73 363 aa13.42□□□□□ -0.26
USP10-202ENST00000540269 PBKQ96KB5 322 aa13.42□□□□□ -0.26
USP10-202ENST00000540269 CCDC43Q96MW1 224 aaKnown RBP13.42□□□□□ -0.26
USP10-202ENST00000540269 AGPAT1Q99943 283 aa13.42□□□□□ -0.26
USP10-202ENST00000540269 TMEM206Q9H813 350 aa13.42□□□□□ -0.26
USP10-202ENST00000540269 KCNG1Q9UIX4 513 aa13.42□□□□□ -0.26
USP10-202ENST00000540269 CES2O00748 559 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 SART1O43290 800 aaKnown RBP13.41□□□□□ -0.26
USP10-202ENST00000540269 SGPL1O95470 568 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 MAPTP10636 758 aaKnown RBP13.41□□□□□ -0.26
USP10-202ENST00000540269 CHRNB2P17787 502 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 TNFAIP3P21580 790 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 HMGCS2P54868 508 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 MAP2K1Q02750 393 aaPredicted RBP13.41□□□□□ -0.26
USP10-202ENST00000540269 MYBPC2Q14324 1141 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 VSIG10LQ86VR7 867 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 IQCKQ8N0W5 287 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 RASGEF1CQ8N431 466 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 CCDC127Q96BQ5 260 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.41□□□□□ -0.261e-7■□□□□ 9.9
USP10-202ENST00000540269 CELF4Q9BZC1 486 aaKnown RBP13.41□□□□□ -0.26
USP10-202ENST00000540269 CNOT7Q9UIV1 285 aaKnown RBP13.41□□□□□ -0.26
USP10-202ENST00000540269 ATP8B3O60423 1300 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 ZNF233A6NK53 670 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 CCDC169A6NNP5 214 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 PGRMC1O00264 195 aaKnown RBP13.41□□□□□ -0.26
USP10-202ENST00000540269 ZBED4O75132 1171 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 NR3C2P08235 984 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 BACE1P56817 501 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 ZNF211Q13398 564 aaPredicted RBP13.41□□□□□ -0.26
USP10-202ENST00000540269 IFI16Q16666 785 aaKnown RBP13.41□□□□□ -0.26
USP10-202ENST00000540269 TAF3Q5VWG9 929 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 ADAT2Q7Z6V5 191 aaKnown RBP13.41□□□□□ -0.26
USP10-202ENST00000540269 ALG3Q92685 438 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 AMACRQ9UHK6 382 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 WDR64B1ANS9 1081 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 BHMG1C9JSJ3 638 aaPredicted RBP13.41□□□□□ -0.26
USP10-202ENST00000540269 ATMINO43313 823 aaPredicted RBP13.41□□□□□ -0.26
USP10-202ENST00000540269 FLT3P36888 993 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 MARCKSL1P49006 195 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 TNNC1P63316 161 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 TNFAIP1Q13829 316 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 SNRNP48Q6IEG0 339 aaKnown RBP13.41□□□□□ -0.26
USP10-202ENST00000540269 DLK2Q6UY11 383 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 NOP9Q86U38 636 aaKnown RBP13.41□□□□□ -0.26
USP10-202ENST00000540269 ST6GALNAC4Q9H4F1 302 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 GABBR1Q9UBS5 961 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 ZNF214Q9UL59 606 aaPredicted RBP13.41□□□□□ -0.26
USP10-202ENST00000540269 TBX20Q9UMR3 447 aa13.41□□□□□ -0.26
USP10-202ENST00000540269 WDR81Q562E7 1941 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 GOLGA6CA6NDK9 693 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 GOLGA6DP0CG33 693 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 PTPRAP18433 802 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 USP8P40818 1118 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 FSTL1Q12841 308 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 PAK2Q13177 524 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 DNAJC21Q5F1R6 531 aaKnown RBP13.4□□□□□ -0.26
USP10-202ENST00000540269 KCTD16Q68DU8 428 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 TTC19Q6DKK2 380 aaPredicted RBP13.4□□□□□ -0.26
USP10-202ENST00000540269 RPUSD2Q8IZ73 545 aaKnown RBP13.4□□□□□ -0.26
USP10-202ENST00000540269 CNKSR2Q8WXI2 1034 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 CTNNBL1Q8WYA6 563 aaPredicted RBP13.4□□□□□ -0.26
USP10-202ENST00000540269 GOLGA6AQ9NYA3 693 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 LCMT1Q9UIC8 334 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 KIAA1217Q5T5P2 1943 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 KRIT1O00522 736 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 KCNA2P16389 499 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 TMEM132BQ14DG7 1078 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 SNRNP35Q16560 246 aaKnown RBP13.4□□□□□ -0.26
USP10-202ENST00000540269 ZNF526Q8TF50 670 aaPredicted RBP13.4□□□□□ -0.26
USP10-202ENST00000540269 WRNIP1Q96S55 665 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 MOV10L1Q9BXT6 1211 aaKnown RBP13.4□□□□□ -0.26
USP10-202ENST00000540269 ERVK-5Q9HDB9 667 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 XPNPEP1Q9NQW7 623 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 TMOD4Q9NZQ9 345 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 CALCOCO1Q9P1Z2 691 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 AMFRQ9UKV5 643 aa13.4□□□□□ -0.26
USP10-202ENST00000540269 CTDP1Q9Y5B0 961 aaPredicted RBP13.4□□□□□ -0.26
USP10-202ENST00000540269 DENND3A2RUS2 1198 aa13.39□□□□□ -0.27
USP10-202ENST00000540269 TTI1O43156 1089 aa13.39□□□□□ -0.27
USP10-202ENST00000540269 FTLP02792 175 aaPredicted RBP13.39□□□□□ -0.27
USP10-202ENST00000540269 CNGA1P29973 690 aa13.39□□□□□ -0.27
USP10-202ENST00000540269 MXI1P50539 228 aa13.39□□□□□ -0.27
USP10-202ENST00000540269 SLC47A2Q86VL8 602 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms