RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 FXR2P51116 673 aaKnown RBP eCLIP18.64■□□□□ 0.578e-9■■■■□ 22.4
DDB1-215ENST00000539712 COASYQ13057 564 aa18.64■□□□□ 0.57
DDB1-215ENST00000539712 PCBP1Q15365 356 aaKnown RBP eCLIP18.64■□□□□ 0.57
DDB1-215ENST00000539712 IL17AQ16552 155 aa18.64■□□□□ 0.57
DDB1-215ENST00000539712 GLB1LQ6UWU2 654 aa18.64■□□□□ 0.57
DDB1-215ENST00000539712 ZNF280BQ86YH2 543 aa18.64■□□□□ 0.57
DDB1-215ENST00000539712 RSPH1Q8WYR4 309 aa18.64■□□□□ 0.57
DDB1-215ENST00000539712 TCF25Q9BQ70 676 aa18.64■□□□□ 0.57
DDB1-215ENST00000539712 EIF2AQ9BY44 585 aaKnown RBP18.64■□□□□ 0.57
DDB1-215ENST00000539712 POLR3FQ9H1D9 316 aaPredicted RBP18.64■□□□□ 0.57
DDB1-215ENST00000539712 RNF39Q9H2S5 420 aa18.64■□□□□ 0.57
DDB1-215ENST00000539712 PUF60Q9UHX1 559 aaKnown RBP18.64■□□□□ 0.57
DDB1-215ENST00000539712 CD207Q9UJ71 328 aa18.64■□□□□ 0.57
DDB1-215ENST00000539712 BARX2Q9UMQ3 279 aaPredicted RBP18.64■□□□□ 0.57
DDB1-215ENST00000539712 DDHD2O94830 711 aa18.63■□□□□ 0.57
DDB1-215ENST00000539712 GALTP07902 379 aa18.63■□□□□ 0.57
DDB1-215ENST00000539712 NCLP19338 710 aaKnown RBP18.63■□□□□ 0.57
DDB1-215ENST00000539712 ALDH7A1P49419 539 aaKnown RBP18.63■□□□□ 0.57
DDB1-215ENST00000539712 NDUFV1P49821 464 aa18.63■□□□□ 0.57
DDB1-215ENST00000539712 KRT17Q04695 432 aa18.63■□□□□ 0.57
DDB1-215ENST00000539712 PTGDRQ13258 359 aa18.63■□□□□ 0.57
DDB1-215ENST00000539712 SMAD4Q13485 552 aaKnown RBP18.63■□□□□ 0.57
DDB1-215ENST00000539712 TFDP1Q14186 410 aa18.63■□□□□ 0.57
DDB1-215ENST00000539712 PLPP4Q5VZY2 271 aa18.63■□□□□ 0.57
DDB1-215ENST00000539712 TMEM184AQ6ZMB5 413 aa18.63■□□□□ 0.57
DDB1-215ENST00000539712 MRPL43Q8N983 215 aaKnown RBP18.63■□□□□ 0.57
DDB1-215ENST00000539712 SMRP1Q8NCR6 262 aa18.63■□□□□ 0.57
DDB1-215ENST00000539712 PGBD4Q96DM1 585 aa18.63■□□□□ 0.57
DDB1-215ENST00000539712 CPB2Q96IY4 423 aa18.63■□□□□ 0.57
DDB1-215ENST00000539712 VN1R3Q9BXE9 311 aa18.63■□□□□ 0.57
DDB1-215ENST00000539712 NGRNQ9NPE2 291 aaKnown RBP18.63■□□□□ 0.57
DDB1-215ENST00000539712 DNAJB4Q9UDY4 337 aa18.63■□□□□ 0.57
DDB1-215ENST00000539712 PRKAG3Q9UGI9 489 aa18.63■□□□□ 0.57
DDB1-215ENST00000539712 INPP5FQ9Y2H2 1132 aa18.63■□□□□ 0.57
DDB1-215ENST00000539712 INO80B-WBP1J3KQ70 363 aa18.62■□□□□ 0.57
DDB1-215ENST00000539712 B4GALT5O43286 388 aa18.62■□□□□ 0.57
DDB1-215ENST00000539712 ZC3H11AO75152 810 aaKnown RBP eCLIP18.62■□□□□ 0.57
DDB1-215ENST00000539712 ARF4P18085 180 aaPredicted RBP18.62■□□□□ 0.57
DDB1-215ENST00000539712 AXLP30530 894 aa18.62■□□□□ 0.57
DDB1-215ENST00000539712 GNL2Q13823 731 aaKnown RBP18.62■□□□□ 0.57
DDB1-215ENST00000539712 PDIA5Q14554 519 aa18.62■□□□□ 0.57
DDB1-215ENST00000539712 MAEAQ7L5Y9 396 aa18.62■□□□□ 0.57
DDB1-215ENST00000539712 ADHFE1Q8IWW8 467 aa18.62■□□□□ 0.57
DDB1-215ENST00000539712 IGSF22Q8N9C0 903 aa18.62■□□□□ 0.57
DDB1-215ENST00000539712 BSNDQ8WZ55 320 aa18.62■□□□□ 0.57
DDB1-215ENST00000539712 CDCA3Q99618 268 aaPredicted RBP18.62■□□□□ 0.57
DDB1-215ENST00000539712 C11orf16Q9NQ32 467 aa18.62■□□□□ 0.57
DDB1-215ENST00000539712 NOL7Q9UMY1 257 aaKnown RBP18.62■□□□□ 0.57
DDB1-215ENST00000539712 IPPQ9Y573 584 aa18.62■□□□□ 0.57
DDB1-215ENST00000539712 CNTNAP2Q9UHC6 1331 aa18.61■□□□□ 0.57
DDB1-215ENST00000539712 C2orf71A6NGG8 1288 aa18.61■□□□□ 0.57
DDB1-215ENST00000539712 PI4K2BG5E9Z4 385 aa18.61■□□□□ 0.57
DDB1-215ENST00000539712 INPPL1O15357 1258 aa18.61■□□□□ 0.57
DDB1-215ENST00000539712 ERLIN2O94905 339 aa18.61■□□□□ 0.57
DDB1-215ENST00000539712 CYP11B2P19099 503 aa18.61■□□□□ 0.57
DDB1-215ENST00000539712 MUTP22033 750 aa18.61■□□□□ 0.57
DDB1-215ENST00000539712 SLC11A1P49279 550 aa18.61■□□□□ 0.57
DDB1-215ENST00000539712 CDCA2Q69YH5 1023 aaPredicted RBP18.61■□□□□ 0.57
DDB1-215ENST00000539712 PADI6Q6TGC4 694 aa18.61■□□□□ 0.57
DDB1-215ENST00000539712 MCPH1Q8NEM0 835 aa18.61■□□□□ 0.57
DDB1-215ENST00000539712 ERMNQ8TAM6 284 aa18.61■□□□□ 0.57
DDB1-215ENST00000539712 CCDC51Q96ER9 411 aa18.61■□□□□ 0.57
DDB1-215ENST00000539712 IGSF21Q96ID5 467 aa18.61■□□□□ 0.57
DDB1-215ENST00000539712 CSRNP2Q9H175 543 aa18.61■□□□□ 0.57
DDB1-215ENST00000539712 RSAD1Q9HA92 442 aa18.61■□□□□ 0.57
DDB1-215ENST00000539712 ENTPD7Q9NQZ7 604 aa18.61■□□□□ 0.57
DDB1-215ENST00000539712 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.61■□□□□ 0.57
DDB1-215ENST00000539712 FAM50BQ9Y247 325 aa18.61■□□□□ 0.57
DDB1-215ENST00000539712 HES2Q9Y543 173 aa18.61■□□□□ 0.57
DDB1-215ENST00000539712 A0A1B0GUA9 196 aa18.6■□□□□ 0.57
DDB1-215ENST00000539712 TTLL13PA6NNM8 815 aa18.6■□□□□ 0.57
DDB1-215ENST00000539712 GJB2P29033 226 aa18.6■□□□□ 0.57
DDB1-215ENST00000539712 NOTUMQ6P988 496 aa18.6■□□□□ 0.57
DDB1-215ENST00000539712 TMC7Q7Z402 723 aa18.6■□□□□ 0.57
DDB1-215ENST00000539712 CCDC43Q96MW1 224 aaKnown RBP18.6■□□□□ 0.57
DDB1-215ENST00000539712 S1PR5Q9H228 398 aa18.6■□□□□ 0.57
DDB1-215ENST00000539712 FZD8Q9H461 694 aa18.6■□□□□ 0.57
DDB1-215ENST00000539712 MIOSQ9NXC5 875 aa18.6■□□□□ 0.57
DDB1-215ENST00000539712 LRWD1Q9UFC0 647 aa18.6■□□□□ 0.57
DDB1-215ENST00000539712 PP2D1A8MPX8 630 aa18.59■□□□□ 0.57
DDB1-215ENST00000539712 SSTR3P32745 418 aaPredicted RBP18.59■□□□□ 0.57
DDB1-215ENST00000539712 CCT6AP40227 531 aaKnown RBP18.59■□□□□ 0.57
DDB1-215ENST00000539712 SYCE2Q6PIF2 218 aa18.59■□□□□ 0.57
DDB1-215ENST00000539712 PPP4R3CPQ6ZMV5 832 aa18.59■□□□□ 0.57
DDB1-215ENST00000539712 DDX53Q86TM3 631 aaKnown RBP18.59■□□□□ 0.57
DDB1-215ENST00000539712 CDR2LQ86X02 465 aaPredicted RBP18.59■□□□□ 0.57
DDB1-215ENST00000539712 VPS52Q8N1B4 723 aa18.59■□□□□ 0.57
DDB1-215ENST00000539712 CNNM3Q8NE01 707 aa18.59■□□□□ 0.57
DDB1-215ENST00000539712 GSTCDQ8NEC7 633 aa18.59■□□□□ 0.57
DDB1-215ENST00000539712 SUSD6Q92537 303 aa18.59■□□□□ 0.57
DDB1-215ENST00000539712 TMEM169Q96HH4 297 aa18.59■□□□□ 0.57
DDB1-215ENST00000539712 MMTAG2Q9BU76 263 aaKnown RBP18.59■□□□□ 0.57
DDB1-215ENST00000539712 C1QTNF1Q9BXJ1 281 aa18.59■□□□□ 0.57
DDB1-215ENST00000539712 GBP3Q9H0R5 595 aa18.59■□□□□ 0.57
DDB1-215ENST00000539712 ZBP1Q9H171 429 aa18.59■□□□□ 0.57
DDB1-215ENST00000539712 POLD4Q9HCU8 107 aa18.59■□□□□ 0.57
DDB1-215ENST00000539712 KIAA1024Q9UPX6 916 aa18.59■□□□□ 0.57
DDB1-215ENST00000539712 USP15Q9Y4E8 981 aaPredicted RBP18.59■□□□□ 0.57
DDB1-215ENST00000539712 ARHGEF35A5YM69 484 aa18.58■□□□□ 0.56
DDB1-215ENST00000539712 ARL5CA6NH57 179 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 342.5 ms