RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 FGBP02675 491 aa14.32□□□□□ -0.12
CCDC42-202ENST00000539522 KRT18P05783 430 aaKnown RBP14.32□□□□□ -0.12
CCDC42-202ENST00000539522 PFKMP08237 780 aa14.32□□□□□ -0.12
CCDC42-202ENST00000539522 IDEP14735 1019 aa14.32□□□□□ -0.12
CCDC42-202ENST00000539522 ATF7P17544 494 aaPredicted RBP14.32□□□□□ -0.12
CCDC42-202ENST00000539522 SARSP49591 514 aaKnown RBP14.32□□□□□ -0.12
CCDC42-202ENST00000539522 WDR5P61964 334 aaKnown RBP14.32□□□□□ -0.12
CCDC42-202ENST00000539522 ASIC1P78348 528 aa14.32□□□□□ -0.12
CCDC42-202ENST00000539522 GTF2BQ00403 316 aa14.32□□□□□ -0.12
CCDC42-202ENST00000539522 NFX1Q12986 1120 aaKnown RBP14.32□□□□□ -0.12
CCDC42-202ENST00000539522 DMP1Q13316 513 aaPredicted RBP14.32□□□□□ -0.12
CCDC42-202ENST00000539522 KMT5BQ4FZB7 885 aa14.32□□□□□ -0.12
CCDC42-202ENST00000539522 CCDC183Q5T5S1 534 aa14.32□□□□□ -0.12
CCDC42-202ENST00000539522 EEF1DP3Q658K8 133 aa14.32□□□□□ -0.12
CCDC42-202ENST00000539522 HAUS6Q7Z4H7 955 aa14.32□□□□□ -0.12
CCDC42-202ENST00000539522 RPUSD2Q8IZ73 545 aaKnown RBP14.32□□□□□ -0.12
CCDC42-202ENST00000539522 KIAA0895Q8NCT3 520 aa14.32□□□□□ -0.12
CCDC42-202ENST00000539522 SEPT8Q92599 483 aa14.32□□□□□ -0.12
CCDC42-202ENST00000539522 INO80BQ9C086 356 aaPredicted RBP14.32□□□□□ -0.12
CCDC42-202ENST00000539522 UBE2OQ9C0C9 1292 aaKnown RBP14.32□□□□□ -0.12
CCDC42-202ENST00000539522 GZF1Q9H116 711 aaPredicted RBP14.32□□□□□ -0.12
CCDC42-202ENST00000539522 TSPYL2Q9H2G4 693 aaPredicted RBP14.32□□□□□ -0.12
CCDC42-202ENST00000539522 TMEM134Q9H6X4 195 aa14.32□□□□□ -0.12
CCDC42-202ENST00000539522 PTPRHQ9HD43 1115 aa14.32□□□□□ -0.12
CCDC42-202ENST00000539522 OLFML3Q9NRN5 406 aa14.32□□□□□ -0.12
CCDC42-202ENST00000539522 COLQQ9Y215 455 aaPredicted RBP14.32□□□□□ -0.12
CCDC42-202ENST00000539522 PHLPP2Q6ZVD8 1323 aa14.32□□□□□ -0.12
CCDC42-202ENST00000539522 CNTNAP2Q9UHC6 1331 aa14.32□□□□□ -0.12
CCDC42-202ENST00000539522 DENND3A2RUS2 1198 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 MEIS3P2A8K0S8 358 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 TISP43B9A030 160 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 C9IYK1 514 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 ACKR2O00590 384 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 GPR182O15218 404 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 MEFVO15553 781 aaPredicted RBP14.31□□□□□ -0.12
CCDC42-202ENST00000539522 TBCAO75347 108 aaKnown RBP14.31□□□□□ -0.12
CCDC42-202ENST00000539522 PRKCBP05771 671 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 BMP6P22004 513 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 PROZP22891 400 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 FAM189BP81408 668 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 STK4Q13043 487 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 POSTNQ15063 836 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 PPP2R5AQ15172 486 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 PSRC1Q6PGN9 363 aaPredicted RBP14.31□□□□□ -0.12
CCDC42-202ENST00000539522 ELOA2Q8IYF1 753 aaPredicted RBP14.31□□□□□ -0.12
CCDC42-202ENST00000539522 DEPTORQ8TB45 409 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 IFT74Q96LB3 600 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 SCLT1Q96NL6 688 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 EIF2AQ9BY44 585 aaKnown RBP14.31□□□□□ -0.12
CCDC42-202ENST00000539522 CXCL16Q9H2A7 254 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 ZHX3Q9H4I2 956 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 PDZD7Q9H5P4 517 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 RGS18Q9NS28 235 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 RNF19AQ9NV58 838 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 TMEM63CQ9P1W3 806 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 LARSQ9P2J5 1176 aaKnown RBP14.31□□□□□ -0.12
CCDC42-202ENST00000539522 KIAA1671Q9BY89 1806 aa14.31□□□□□ -0.12
CCDC42-202ENST00000539522 A0A1B0GUA9 196 aa14.3□□□□□ -0.12
CCDC42-202ENST00000539522 PVALEFA0A1B0GWK0 134 aa14.3□□□□□ -0.12
CCDC42-202ENST00000539522 GRXCR1A8MXD5 290 aa14.3□□□□□ -0.12
CCDC42-202ENST00000539522 RPN1P04843 607 aaKnown RBP14.3□□□□□ -0.12
CCDC42-202ENST00000539522 GAP43P17677 238 aa14.3□□□□□ -0.12
CCDC42-202ENST00000539522 AMPD3Q01432 767 aa14.3□□□□□ -0.12
CCDC42-202ENST00000539522 HERC4Q5GLZ8 1057 aaPredicted RBP14.3□□□□□ -0.12
CCDC42-202ENST00000539522 CATSPER4Q7RTX7 472 aa14.3□□□□□ -0.12
CCDC42-202ENST00000539522 ZNF598Q86UK7 904 aaKnown RBP14.3□□□□□ -0.12
CCDC42-202ENST00000539522 FAM178BQ8IXR5 827 aa14.3□□□□□ -0.12
CCDC42-202ENST00000539522 SMG8Q8ND04 991 aaKnown RBP14.3□□□□□ -0.12
CCDC42-202ENST00000539522 APBB2Q92870 758 aa14.3□□□□□ -0.12
CCDC42-202ENST00000539522 ZBTB45Q96K62 511 aaPredicted RBP14.3□□□□□ -0.12
CCDC42-202ENST00000539522 ACO2Q99798 780 aaKnown RBP14.3□□□□□ -0.12
CCDC42-202ENST00000539522 ADAM2Q99965 735 aa14.3□□□□□ -0.12
CCDC42-202ENST00000539522 TARS2Q9BW92 718 aaKnown RBP14.3□□□□□ -0.12
CCDC42-202ENST00000539522 C2orf40Q9H1Z8 148 aa14.3□□□□□ -0.12
CCDC42-202ENST00000539522 RC3H2Q9HBD1 1191 aaKnown RBP14.3□□□□□ -0.12
CCDC42-202ENST00000539522 PRMT7Q9NVM4 692 aaPredicted RBP14.3□□□□□ -0.12
CCDC42-202ENST00000539522 TBX20Q9UMR3 447 aa14.3□□□□□ -0.12
CCDC42-202ENST00000539522 PCDHA5Q9Y5H7 936 aa14.3□□□□□ -0.12
CCDC42-202ENST00000539522 ANK1P16157 1881 aa14.29□□□□□ -0.12
CCDC42-202ENST00000539522 ABHD14A-ACY1A0A1B0GW23 586 aa14.29□□□□□ -0.12
CCDC42-202ENST00000539522 ANKRD63C9JTQ0 380 aa14.29□□□□□ -0.12
CCDC42-202ENST00000539522 K7ENM7 598 aa14.29□□□□□ -0.12
CCDC42-202ENST00000539522 K7ERI5 159 aa14.29□□□□□ -0.12
CCDC42-202ENST00000539522 FAM189A1O60320 539 aa14.29□□□□□ -0.12
CCDC42-202ENST00000539522 KINO60870 393 aaKnown RBP14.29□□□□□ -0.12
CCDC42-202ENST00000539522 BAIAP3O94812 1187 aa14.29□□□□□ -0.12
CCDC42-202ENST00000539522 RHOBTB3O94955 611 aa14.29□□□□□ -0.12
CCDC42-202ENST00000539522 ARHGEF15O94989 841 aa14.29□□□□□ -0.12
CCDC42-202ENST00000539522 PIGRP01833 764 aa14.29□□□□□ -0.12
CCDC42-202ENST00000539522 MYL1P05976 194 aa14.29□□□□□ -0.12
CCDC42-202ENST00000539522 SFPQP23246 707 aaKnown RBP eCLIP14.29□□□□□ -0.12
CCDC42-202ENST00000539522 IKBKEQ14164 716 aa14.29□□□□□ -0.12
CCDC42-202ENST00000539522 ZSCAN23Q3MJ62 389 aa14.29□□□□□ -0.12
CCDC42-202ENST00000539522 PRPF38BQ5VTL8 546 aaKnown RBP14.29□□□□□ -0.12
CCDC42-202ENST00000539522 MAP4K3Q8IVH8 894 aa14.29□□□□□ -0.12
CCDC42-202ENST00000539522 ZBTB8OSQ8IWT0 167 aa14.29□□□□□ -0.12
CCDC42-202ENST00000539522 CCDC65Q8IXS2 484 aa14.29□□□□□ -0.12
CCDC42-202ENST00000539522 SCFD1Q8WVM8 642 aa14.29□□□□□ -0.12
CCDC42-202ENST00000539522 PRIMPOLQ96LW4 560 aa14.29□□□□□ -0.12
CCDC42-202ENST00000539522 TRAIPQ9BWF2 469 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms