RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 PRDM5Q9NQX1 630 aaPredicted RBP10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 TAB2Q9NYJ8 693 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 LIMA1Q9UHB6 759 aaKnown RBP10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 ATP11BQ9Y2G3 1177 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 COL1A2P08123 1366 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 BICDL2A1A5D9 508 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 DENND3A2RUS2 1198 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 FAM86C2PA6NEL3 165 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 TTLL13PA6NNM8 815 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 PDXKO00764 312 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 TEX33O43247 280 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 RARBP10826 455 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 CDK11BP21127 795 aaKnown RBP10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 CASP4P49662 377 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 CPT1AP50416 773 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 COPB1P53618 953 aaKnown RBP10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 TPM4P67936 248 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 ADAM17P78536 824 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 LRRC63Q05C16 580 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 LAMTOR4Q0VGL1 99 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 PPFIA1Q13136 1202 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 KRT31Q15323 416 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 KIAA0753Q2KHM9 967 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 TCP11X2Q5H9J9 407 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 GNASQ5JWF2 1037 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 CCSAPQ6IQ19 270 aaPredicted RBP10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 SLC39A4Q6P5W5 647 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 MTHFD1LQ6UB35 978 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 CXCL17Q6UXB2 119 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 CREBRFQ8IUR6 639 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 LMBR1Q8WVP7 490 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 SLC7A3Q8WY07 619 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 TIFAQ96CG3 184 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 PPP1R16BQ96T49 567 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 TSG101Q99816 390 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 VPS16Q9H269 839 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 PRDM12Q9H4Q4 367 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 THAP9Q9H5L6 903 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 XPNPEP3Q9NQH7 507 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 TYW1Q9NV66 732 aaKnown RBP10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 CXXC1Q9P0U4 656 aaPredicted RBP10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 ARHGAP28Q9P2N2 729 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 SUCLA2Q9P2R7 463 aaPredicted RBP10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 DDX20Q9UHI6 824 aaKnown RBP10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 ZNF215Q9UL58 517 aaPredicted RBP10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 TBX20Q9UMR3 447 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 TRAF3IP3Q9Y228 551 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 PPME1Q9Y570 386 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 PCDHB13Q9Y5F0 798 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 UBE4BO95155 1302 aa10.07□□□□□ -0.8
RTN4IP1-204ENST00000539449 XIRP2A4UGR9 3374 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 LRRIQ4A6NIV6 560 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 SPDYE4A6NLX3 237 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 SERPINC1P01008 464 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 NR3C1P04150 777 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 SRGAP2CP0DJJ0 459 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 NAMPTP43490 491 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 UBASH3AP57075 661 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 DMP1Q13316 513 aaPredicted RBP10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 ADAM9Q13443 819 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 ADGRE1Q14246 886 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 NR1I3Q14994 352 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 KCNA10Q16322 511 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 FOXR2Q6PJQ5 311 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 RUFY4Q6ZNE9 571 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 METTL13Q8N6R0 699 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 SPC24Q8NBT2 197 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 NOC3LQ8WTT2 800 aaKnown RBP10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 IFT74Q96LB3 600 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 CNOT6LQ96LI5 555 aaKnown RBP10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 ACCSQ96QU6 501 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 PCIF1Q9H4Z3 704 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 C17orf75Q9HAS0 396 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 AGPAT3Q9NRZ7 376 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 DMAC2Q9NW81 257 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 HDAC6Q9UBN7 1215 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 GRIN2DO15399 1336 aa10.06□□□□□ -0.8
RTN4IP1-204ENST00000539449 A0A1B0GTH6 734 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 LRRC10BA6NIK2 292 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 MAGEB2O15479 319 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 TREHO43280 583 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 CALUO43852 315 aaPredicted RBP10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 KIF20AO95235 890 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 VTNP04004 478 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 NR2F2P24468 414 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 SMTNP53814 917 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 EPHB4P54760 987 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 FKBP3Q00688 224 aaKnown RBP10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 CCDC173Q0VFZ6 552 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 ALCAMQ13740 583 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 EDRF1Q3B7T1 1238 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 NBPF20Q3BBV1 942 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 FILIP1Q7Z7B0 1213 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 RHPN2Q8IUC4 686 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 MAP4K3Q8IVH8 894 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 KIAA0319LQ8IZA0 1049 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 SYCP3Q8IZU3 236 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 DEPTORQ8TB45 409 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms