RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 LTBRP36941 435 aa23.79■■□□□ 1.4
CCDC78-215ENST00000538176 MBTD1Q05BQ5 628 aa23.79■■□□□ 1.4
CCDC78-215ENST00000538176 POTEGQ6S5H5 508 aa23.79■■□□□ 1.4
CCDC78-215ENST00000538176 ZBTB8OSQ8IWT0 167 aa23.79■■□□□ 1.4
CCDC78-215ENST00000538176 SLC39A11Q8N1S5 342 aa23.79■■□□□ 1.4
CCDC78-215ENST00000538176 ASAP3Q8TDY4 903 aa23.79■■□□□ 1.4
CCDC78-215ENST00000538176 TMEM169Q96HH4 297 aa23.79■■□□□ 1.4
CCDC78-215ENST00000538176 CSRNP2Q9H175 543 aa23.79■■□□□ 1.4
CCDC78-215ENST00000538176 RSAD1Q9HA92 442 aa23.79■■□□□ 1.4
CCDC78-215ENST00000538176 PRKAG3Q9UGI9 489 aa23.79■■□□□ 1.4
CCDC78-215ENST00000538176 FSCN2O14926 492 aa23.78■■□□□ 1.4
CCDC78-215ENST00000538176 SRGAP2BP0DMP2 458 aa23.78■■□□□ 1.4
CCDC78-215ENST00000538176 BCAR1P56945 870 aa23.78■■□□□ 1.4
CCDC78-215ENST00000538176 NBR1Q14596 966 aa23.78■■□□□ 1.4
CCDC78-215ENST00000538176 LPPQ93052 612 aa23.78■■□□□ 1.4
CCDC78-215ENST00000538176 TBC1D13Q9NVG8 400 aa23.78■■□□□ 1.4
CCDC78-215ENST00000538176 PRMT7Q9NVM4 692 aaPredicted RBP23.78■■□□□ 1.4
CCDC78-215ENST00000538176 HCSTQ9UBK5 93 aa23.78■■□□□ 1.4
CCDC78-215ENST00000538176 KIAA1024Q9UPX6 916 aa23.78■■□□□ 1.4
CCDC78-215ENST00000538176 DNM3Q9UQ16 869 aa23.78■■□□□ 1.4
CCDC78-215ENST00000538176 PLXNA4Q9HCM2 1894 aa23.77■■□□□ 1.4
CCDC78-215ENST00000538176 A0A087WWV3 80 aa23.77■■□□□ 1.4
CCDC78-215ENST00000538176 ITGA4P13612 1032 aa23.77■■□□□ 1.4
CCDC78-215ENST00000538176 PDCP20941 246 aa23.77■■□□□ 1.4
CCDC78-215ENST00000538176 NRIP1P48552 1158 aa23.77■■□□□ 1.4
CCDC78-215ENST00000538176 NDUFV1P49821 464 aa23.77■■□□□ 1.4
CCDC78-215ENST00000538176 ERVFC1P60507 584 aa23.77■■□□□ 1.4
CCDC78-215ENST00000538176 GIT2Q14161 759 aa23.77■■□□□ 1.4
CCDC78-215ENST00000538176 UBXN11Q5T124 520 aa23.77■■□□□ 1.4
CCDC78-215ENST00000538176 ARL6IP4Q66PJ3 421 aaKnown RBP23.77■■□□□ 1.4
CCDC78-215ENST00000538176 PPP4R3CPQ6ZMV5 832 aa23.77■■□□□ 1.4
CCDC78-215ENST00000538176 AGMOQ6ZNB7 445 aa23.77■■□□□ 1.4
CCDC78-215ENST00000538176 TMC7Q7Z402 723 aa23.77■■□□□ 1.4
CCDC78-215ENST00000538176 FAM178BQ8IXR5 827 aa23.77■■□□□ 1.4
CCDC78-215ENST00000538176 SNX29Q8TEQ0 813 aa23.77■■□□□ 1.4
CCDC78-215ENST00000538176 KIFAP3Q92845 792 aa23.77■■□□□ 1.4
CCDC78-215ENST00000538176 FAM193BQ96PV7 902 aaPredicted RBP23.77■■□□□ 1.4
CCDC78-215ENST00000538176 TCF25Q9BQ70 676 aa23.77■■□□□ 1.4
CCDC78-215ENST00000538176 BACH2Q9BYV9 841 aa23.77■■□□□ 1.4
CCDC78-215ENST00000538176 TRIM6Q9C030 488 aaPredicted RBP23.77■■□□□ 1.4
CCDC78-215ENST00000538176 ENTPD7Q9NQZ7 604 aa23.77■■□□□ 1.4
CCDC78-215ENST00000538176 A0A1B0GUA9 196 aa23.76■■□□□ 1.39
CCDC78-215ENST00000538176 LRRIQ4A6NIV6 560 aa23.76■■□□□ 1.39
CCDC78-215ENST00000538176 ZC3H11AO75152 810 aaKnown RBP eCLIP23.76■■□□□ 1.39
CCDC78-215ENST00000538176 ALDH2P05091 517 aa23.76■■□□□ 1.39
CCDC78-215ENST00000538176 NAMPTP43490 491 aa23.76■■□□□ 1.39
CCDC78-215ENST00000538176 FAM187BQ17R55 369 aa23.76■■□□□ 1.39
CCDC78-215ENST00000538176 MAEAQ7L5Y9 396 aa23.76■■□□□ 1.39
CCDC78-215ENST00000538176 ADGRD2Q7Z7M1 963 aa23.76■■□□□ 1.39
CCDC78-215ENST00000538176 IFT74Q96LB3 600 aa23.76■■□□□ 1.39
CCDC78-215ENST00000538176 NECAB3Q96P71 396 aaPredicted RBP23.76■■□□□ 1.39
CCDC78-215ENST00000538176 TMEM175Q9BSA9 504 aa23.76■■□□□ 1.39
CCDC78-215ENST00000538176 BHMT2Q9H2M3 363 aa23.76■■□□□ 1.39
CCDC78-215ENST00000538176 KCNG1Q9UIX4 513 aa23.76■■□□□ 1.39
CCDC78-215ENST00000538176 CD207Q9UJ71 328 aa23.76■■□□□ 1.39
CCDC78-215ENST00000538176 INPP5FQ9Y2H2 1132 aa23.76■■□□□ 1.39
CCDC78-215ENST00000538176 CSPG5O95196 566 aa23.75■■□□□ 1.39
CCDC78-215ENST00000538176 BMP15O95972 392 aa23.75■■□□□ 1.39
CCDC78-215ENST00000538176 GALTP07902 379 aa23.75■■□□□ 1.39
CCDC78-215ENST00000538176 ARF4P18085 180 aaPredicted RBP23.75■■□□□ 1.39
CCDC78-215ENST00000538176 ATP2C1P98194 919 aaPredicted RBP23.75■■□□□ 1.39
CCDC78-215ENST00000538176 CUL4AQ13619 759 aa23.75■■□□□ 1.39
CCDC78-215ENST00000538176 SMC1AQ14683 1233 aaKnown RBP23.75■■□□□ 1.39
CCDC78-215ENST00000538176 AMHR2Q16671 573 aa23.75■■□□□ 1.39
CCDC78-215ENST00000538176 DUSP6Q16828 381 aa23.75■■□□□ 1.39
CCDC78-215ENST00000538176 CDCA2Q69YH5 1023 aaPredicted RBP23.75■■□□□ 1.39
CCDC78-215ENST00000538176 SLC27A1Q6PCB7 646 aa23.75■■□□□ 1.39
CCDC78-215ENST00000538176 RBM23Q86U06 439 aaKnown RBP23.75■■□□□ 1.39
CCDC78-215ENST00000538176 FZD8Q9H461 694 aa23.75■■□□□ 1.39
CCDC78-215ENST00000538176 NRDE2Q9H7Z3 1164 aa23.75■■□□□ 1.39
CCDC78-215ENST00000538176 DDX19AQ9NUU7 478 aaKnown RBP23.75■■□□□ 1.39
CCDC78-215ENST00000538176 GIT1Q9Y2X7 761 aa23.75■■□□□ 1.39
CCDC78-215ENST00000538176 IPPQ9Y573 584 aa23.75■■□□□ 1.39
CCDC78-215ENST00000538176 ATG2AQ2TAZ0 1938 aa23.74■■□□□ 1.39
CCDC78-215ENST00000538176 INPPL1O15357 1258 aa23.74■■□□□ 1.39
CCDC78-215ENST00000538176 EYA4O95677 639 aa23.74■■□□□ 1.39
CCDC78-215ENST00000538176 IL9P15248 144 aa23.74■■□□□ 1.39
CCDC78-215ENST00000538176 GTF2F1P35269 517 aaKnown RBP eCLIP23.74■■□□□ 1.39
CCDC78-215ENST00000538176 EFNA5P52803 228 aa23.74■■□□□ 1.39
CCDC78-215ENST00000538176 COASYQ13057 564 aa23.74■■□□□ 1.39
CCDC78-215ENST00000538176 SMAD4Q13485 552 aaKnown RBP23.74■■□□□ 1.39
CCDC78-215ENST00000538176 SMAD2Q15796 467 aaKnown RBP23.74■■□□□ 1.39
CCDC78-215ENST00000538176 MAPK6Q16659 721 aa23.74■■□□□ 1.39
CCDC78-215ENST00000538176 LONRF3Q496Y0 759 aa23.74■■□□□ 1.39
CCDC78-215ENST00000538176 TMEM184AQ6ZMB5 413 aa23.74■■□□□ 1.39
CCDC78-215ENST00000538176 BRAPQ7Z569 592 aa23.74■■□□□ 1.39
CCDC78-215ENST00000538176 DDX53Q86TM3 631 aaKnown RBP23.74■■□□□ 1.39
CCDC78-215ENST00000538176 MRPL43Q8N983 215 aaKnown RBP23.74■■□□□ 1.39
CCDC78-215ENST00000538176 SMG8Q8ND04 991 aaKnown RBP23.74■■□□□ 1.39
CCDC78-215ENST00000538176 IGSF21Q96ID5 467 aa23.74■■□□□ 1.39
CCDC78-215ENST00000538176 NT5C3AQ9H0P0 336 aa23.74■■□□□ 1.39
CCDC78-215ENST00000538176 GPRC5CQ9NQ84 441 aa23.74■■□□□ 1.39
CCDC78-215ENST00000538176 ZMYM2Q9UBW7 1377 aa23.74■■□□□ 1.39
CCDC78-215ENST00000538176 MEIS3P2A8K0S8 358 aa23.73■■□□□ 1.39
CCDC78-215ENST00000538176 SLC26A4O43511 780 aa23.73■■□□□ 1.39
CCDC78-215ENST00000538176 NR1I2O75469 434 aa23.73■■□□□ 1.39
CCDC78-215ENST00000538176 DLX2Q07687 328 aaPredicted RBP23.73■■□□□ 1.39
CCDC78-215ENST00000538176 GJD3Q8N144 294 aa23.73■■□□□ 1.39
CCDC78-215ENST00000538176 DEPTORQ8TB45 409 aa23.73■■□□□ 1.39
CCDC78-215ENST00000538176 CPB2Q96IY4 423 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms