RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 IGSF22Q8N9C0 903 aa3.85□□□□□ -1.79
SKA3-207ENST00000536239 SCARB1Q8WTV0 552 aa3.85□□□□□ -1.79
SKA3-207ENST00000536239 ANKS1AQ92625 1134 aa3.85□□□□□ -1.79
SKA3-207ENST00000536239 RPGRQ92834 1020 aaKnown RBP3.85□□□□□ -1.79
SKA3-207ENST00000536239 SCLYQ96I15 445 aa3.85□□□□□ -1.79
SKA3-207ENST00000536239 UIMC1Q96RL1 719 aa3.85□□□□□ -1.79
SKA3-207ENST00000536239 TUBGCP5Q96RT8 1024 aa3.85□□□□□ -1.79
SKA3-207ENST00000536239 GMLQ99445 158 aa3.85□□□□□ -1.79
SKA3-207ENST00000536239 LSM14BQ9BX40 385 aaKnown RBP3.85□□□□□ -1.79
SKA3-207ENST00000536239 TRIM55Q9BYV6 548 aa3.85□□□□□ -1.79
SKA3-207ENST00000536239 ALG13Q9NP73 1137 aaKnown RBP3.85□□□□□ -1.79
SKA3-207ENST00000536239 ING3Q9NXR8 418 aa3.85□□□□□ -1.79
SKA3-207ENST00000536239 CHST2Q9Y4C5 530 aa3.85□□□□□ -1.79
SKA3-207ENST00000536239 DVL2O14641 736 aa3.84□□□□□ -1.79
SKA3-207ENST00000536239 NRP1O14786 923 aa3.84□□□□□ -1.79
SKA3-207ENST00000536239 KRT37O76014 449 aa3.84□□□□□ -1.79
SKA3-207ENST00000536239 FSBPO95073 299 aa3.84□□□□□ -1.79
SKA3-207ENST00000536239 GUCY1B3Q02153 619 aa3.84□□□□□ -1.79
SKA3-207ENST00000536239 MAN2A1Q16706 1144 aa3.84□□□□□ -1.79
SKA3-207ENST00000536239 ARHGAP44Q17R89 818 aa3.84□□□□□ -1.79
SKA3-207ENST00000536239 LONRF2Q1L5Z9 754 aa3.84□□□□□ -1.79
SKA3-207ENST00000536239 DOK3Q7L591 496 aa3.84□□□□□ -1.79
SKA3-207ENST00000536239 SRRM1Q8IYB3 904 aaKnown RBP3.84□□□□□ -1.79
SKA3-207ENST00000536239 CAGE1Q8TC20 777 aa3.84□□□□□ -1.79
SKA3-207ENST00000536239 PITHD1Q9GZP4 211 aaPredicted RBP3.84□□□□□ -1.79
SKA3-207ENST00000536239 ACSS2Q9NR19 701 aa3.84□□□□□ -1.79
SKA3-207ENST00000536239 RNF7Q9UBF6 113 aa3.84□□□□□ -1.79
SKA3-207ENST00000536239 HDAC5Q9UQL6 1122 aa3.84□□□□□ -1.79
SKA3-207ENST00000536239 A0A0A6YYJ9 748 aa3.83□□□□□ -1.8
SKA3-207ENST00000536239 LEFTY2O00292 366 aa3.83□□□□□ -1.8
SKA3-207ENST00000536239 ESRRBO95718 433 aa3.83□□□□□ -1.8
SKA3-207ENST00000536239 BLOC1S1P78537 153 aa3.83□□□□□ -1.8
SKA3-207ENST00000536239 MRPL49Q13405 166 aaKnown RBP3.83□□□□□ -1.8
SKA3-207ENST00000536239 MYBPC3Q14896 1274 aa3.83□□□□□ -1.8
SKA3-207ENST00000536239 TRIM61Q5EBN2 209 aa3.83□□□□□ -1.8
SKA3-207ENST00000536239 ABHD17BQ5VST6 288 aa3.83□□□□□ -1.8
SKA3-207ENST00000536239 PLXDC1Q8IUK5 500 aa3.83□□□□□ -1.8
SKA3-207ENST00000536239 CPEB3Q8NE35 698 aaKnown RBP3.83□□□□□ -1.8
SKA3-207ENST00000536239 OR5M3Q8NGP4 307 aa3.83□□□□□ -1.8
SKA3-207ENST00000536239 SMG7Q92540 1137 aaKnown RBP3.83□□□□□ -1.8
SKA3-207ENST00000536239 SLC9A6Q92581 669 aa3.83□□□□□ -1.8
SKA3-207ENST00000536239 SOX7Q9BT81 388 aa3.83□□□□□ -1.8
SKA3-207ENST00000536239 CCDC113Q9H0I3 377 aa3.83□□□□□ -1.8
SKA3-207ENST00000536239 TLK1Q9UKI8 766 aa3.83□□□□□ -1.8
SKA3-207ENST00000536239 TCRBV16S1A1N1A0A5B0 115 aa3.82□□□□□ -1.8
SKA3-207ENST00000536239 ZBTB7CA1YPR0 619 aa3.82□□□□□ -1.8
SKA3-207ENST00000536239 UNC119BA6NIH7 251 aa3.82□□□□□ -1.8
SKA3-207ENST00000536239 DIRC3C9JPN6 131 aa3.82□□□□□ -1.8
SKA3-207ENST00000536239 MAFGO15525 162 aa3.82□□□□□ -1.8
SKA3-207ENST00000536239 RBMXL2O75526 392 aaKnown RBP3.82□□□□□ -1.8
SKA3-207ENST00000536239 IGLV2-14P01704 120 aa3.82□□□□□ -1.8
SKA3-207ENST00000536239 CYP17A1P05093 508 aa3.82□□□□□ -1.8
SKA3-207ENST00000536239 GAAP10253 952 aa3.82□□□□□ -1.8
SKA3-207ENST00000536239 ZSCAN20P17040 1043 aaPredicted RBP3.82□□□□□ -1.8
SKA3-207ENST00000536239 MPLP40238 635 aa3.82□□□□□ -1.8
SKA3-207ENST00000536239 CASRP41180 1078 aa3.82□□□□□ -1.8
SKA3-207ENST00000536239 MECP2P51608 486 aaKnown RBP3.82□□□□□ -1.8
SKA3-207ENST00000536239 WNT3AP56704 352 aa3.82□□□□□ -1.8
SKA3-207ENST00000536239 RNASE9P60153 205 aaKnown RBP3.82□□□□□ -1.8
SKA3-207ENST00000536239 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
SKA3-207ENST00000536239 NHLH1Q02575 133 aa3.82□□□□□ -1.8
SKA3-207ENST00000536239 KANSL1Q7Z3B3 1105 aa3.82□□□□□ -1.8
SKA3-207ENST00000536239 NME9Q86XW9 330 aa3.82□□□□□ -1.8
SKA3-207ENST00000536239 SLC43A3Q8NBI5 491 aa3.82□□□□□ -1.8
SKA3-207ENST00000536239 IL17RAQ96F46 866 aa3.82□□□□□ -1.8
SKA3-207ENST00000536239 TEX101Q9BY14 249 aa3.82□□□□□ -1.8
SKA3-207ENST00000536239 DNAJC9-AS1A6NH13 148 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 ALDH1A2O94788 518 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 MATN4O95460 622 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 EGR2P11161 476 aaPredicted RBP3.81□□□□□ -1.8
SKA3-207ENST00000536239 NHLH2Q02577 135 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 ADCY2Q08462 1091 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 MPP3Q13368 585 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 TP53BP2Q13625 1128 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 EPHA7Q15375 998 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 ZC3H12BQ5HYM0 836 aaKnown RBP3.81□□□□□ -1.8
SKA3-207ENST00000536239 GPRIN1Q7Z2K8 1008 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 XYLT1Q86Y38 959 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 C9orf106Q8NAJ2 232 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 PIK3C3Q8NEB9 887 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 PPP1R14CQ8TAE6 165 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 ASB10Q8WXI3 467 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 ADAM2Q99965 735 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 DUSP26Q9BV47 211 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 MTG2Q9H4K7 406 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 PCIF1Q9H4Z3 704 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 CLCA2Q9UQC9 943 aa3.81□□□□□ -1.8
SKA3-207ENST00000536239 TNPO3Q9Y5L0 923 aaKnown RBP3.81□□□□□ -1.8
SKA3-207ENST00000536239 KDM2BQ8NHM5 1336 aa3.8□□□□□ -1.8
SKA3-207ENST00000536239 PRR5-ARHGAP8B1AHC4 643 aa3.8□□□□□ -1.8
SKA3-207ENST00000536239 KCNQ2O43526 872 aa3.8□□□□□ -1.8
SKA3-207ENST00000536239 OPHN1O60890 802 aa3.8□□□□□ -1.8
SKA3-207ENST00000536239 HLA-DOAP06340 250 aa3.8□□□□□ -1.8
SKA3-207ENST00000536239 DDX6P26196 483 aaKnown RBP eCLIP3.8□□□□□ -1.8
SKA3-207ENST00000536239 MAPK7Q13164 816 aa3.8□□□□□ -1.8
SKA3-207ENST00000536239 FGD2Q7Z6J4 655 aa3.8□□□□□ -1.8
SKA3-207ENST00000536239 SYT12Q8IV01 421 aa3.8□□□□□ -1.8
SKA3-207ENST00000536239 UNC5BQ8IZJ1 945 aa3.8□□□□□ -1.8
SKA3-207ENST00000536239 ZNF384Q8TF68 577 aa3.8□□□□□ -1.8
SKA3-207ENST00000536239 NOL10Q9BSC4 688 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms