RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 EPC2Q52LR7 807 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 KDM7AQ6ZMT4 941 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 ADAT2Q7Z6V5 191 aaKnown RBP14.22□□□□□ -0.13
LDLR-203ENST00000535915 C12orf56Q8IXR9 622 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 NIM1KQ8IY84 436 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 ATP6V1G3Q96LB4 118 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 TAAR1Q96RJ0 339 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 CENPHQ9H3R5 247 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 GPRC5CQ9NQ84 441 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.22□□□□□ -0.132e-6■■■■■ 72.5
LDLR-203ENST00000535915 PGAP2Q9UHJ9 254 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 TTC7AQ9ULT0 858 aaPredicted RBP14.22□□□□□ -0.13
LDLR-203ENST00000535915 ZNRF3Q9ULT6 936 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 BHMG1C9JSJ3 638 aaPredicted RBP14.22□□□□□ -0.13
LDLR-203ENST00000535915 ANKRD65E5RJM6 399 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 P4HA2O15460 535 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 FTLP02792 175 aaPredicted RBP14.22□□□□□ -0.13
LDLR-203ENST00000535915 NR1D1P20393 614 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 GTF2BQ00403 316 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 RHOT2Q8IXI1 618 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 RPUSD2Q8IZ73 545 aaKnown RBP14.22□□□□□ -0.13
LDLR-203ENST00000535915 FBXO41Q8TF61 875 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 CARD9Q9H257 536 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 DPH5Q9H2P9 285 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 CTTNBP2NLQ9P2B4 639 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 NR2E1Q9Y466 385 aa14.22□□□□□ -0.13
LDLR-203ENST00000535915 KIAA1217Q5T5P2 1943 aa14.21□□□□□ -0.13
LDLR-203ENST00000535915 ZNFX1Q9P2E3 1918 aaKnown RBP14.21□□□□□ -0.13
LDLR-203ENST00000535915 GOLGA8IPA6NC78 632 aa14.21□□□□□ -0.13
LDLR-203ENST00000535915 GOLGA8JA6NMD2 632 aa14.21□□□□□ -0.13
LDLR-203ENST00000535915 HMGB1P1B2RPK0 211 aaPredicted RBP14.21□□□□□ -0.13
LDLR-203ENST00000535915 BACH1O14867 736 aa14.21□□□□□ -0.13
LDLR-203ENST00000535915 ZEB2O60315 1214 aa14.21□□□□□ -0.13
LDLR-203ENST00000535915 CTNNA1P35221 906 aaKnown RBP14.21□□□□□ -0.13
LDLR-203ENST00000535915 MXI1P50539 228 aa14.21□□□□□ -0.13
LDLR-203ENST00000535915 RPS6P62753 249 aaKnown RBP14.21□□□□□ -0.13
LDLR-203ENST00000535915 MAP3K10Q02779 954 aa14.21□□□□□ -0.13
LDLR-203ENST00000535915 ZNF211Q13398 564 aaPredicted RBP14.21□□□□□ -0.13
LDLR-203ENST00000535915 C1orf220Q5T0J3 134 aa14.21□□□□□ -0.13
LDLR-203ENST00000535915 FAM102BQ5T8I3 360 aa14.21□□□□□ -0.13
LDLR-203ENST00000535915 LPAR1Q92633 364 aa14.21□□□□□ -0.13
LDLR-203ENST00000535915 VTI1AQ96AJ9 217 aa14.21□□□□□ -0.13
LDLR-203ENST00000535915 NAP1L3Q99457 506 aaPredicted RBP14.21□□□□□ -0.13
LDLR-203ENST00000535915 CTDP1Q9Y5B0 961 aaPredicted RBP14.21□□□□□ -0.13
LDLR-203ENST00000535915 ASTN2O75129 1339 aaPredicted RBP14.21□□□□□ -0.13
LDLR-203ENST00000535915 PHF20L1A8MW92 1017 aa14.21□□□□□ -0.14
LDLR-203ENST00000535915 LYPLA2O95372 231 aa14.21□□□□□ -0.14
LDLR-203ENST00000535915 CHRM1P11229 460 aaPredicted RBP14.21□□□□□ -0.14
LDLR-203ENST00000535915 FLT3P36888 993 aa14.21□□□□□ -0.14
LDLR-203ENST00000535915 RASA3Q14644 834 aa14.21□□□□□ -0.14
LDLR-203ENST00000535915 PGM5Q15124 567 aa14.21□□□□□ -0.14
LDLR-203ENST00000535915 UAP1Q16222 522 aaPredicted RBP14.21□□□□□ -0.14
LDLR-203ENST00000535915 XKR9Q5GH70 373 aa14.21□□□□□ -0.14
LDLR-203ENST00000535915 ICE2Q659A1 982 aa14.21□□□□□ -0.14
LDLR-203ENST00000535915 ZNF746Q6NUN9 644 aaPredicted RBP14.21□□□□□ -0.14
LDLR-203ENST00000535915 LRIG3Q6UXM1 1119 aa14.21□□□□□ -0.14
LDLR-203ENST00000535915 OR2W6PQ8NHA6 318 aa14.21□□□□□ -0.14
LDLR-203ENST00000535915 PLEKHO2Q8TD55 490 aa14.21□□□□□ -0.14
LDLR-203ENST00000535915 TMEM174Q8WUU8 243 aa14.21□□□□□ -0.14
LDLR-203ENST00000535915 UBLCP1Q8WVY7 318 aaPredicted RBP14.21□□□□□ -0.14
LDLR-203ENST00000535915 TRIM31Q9BZY9 425 aa14.21□□□□□ -0.14
LDLR-203ENST00000535915 SLC38A10Q9HBR0 1119 aa14.21□□□□□ -0.14
LDLR-203ENST00000535915 GOLGA6L10A0A0M3HER8 536 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 EBAG9O00559 213 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 MYZAPP0CAP1 466 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 PLA2G4FQ68DD2 849 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 KAT5Q92993 513 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 IWS1Q96ST2 819 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 TRIM51Q9BSJ1 452 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 TMEM117Q9H0C3 514 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 TMBIM4Q9HC24 238 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 FAM114A2Q9NRY5 505 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 TMOD4Q9NZQ9 345 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 ALG6Q9Y672 507 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 TESPA1A2RU30 521 aaPredicted RBP14.2□□□□□ -0.14
LDLR-203ENST00000535915 CCDC169A6NNP5 214 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 TMEM110-MUSTN1A8MSY1 372 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 ATP9AO75110 1047 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 COPB2P35606 906 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 PTENP60484 403 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 GUCY1A3Q02108 690 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 GHRHRQ02643 423 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 EN1Q05925 392 aaPredicted RBP14.2□□□□□ -0.14
LDLR-203ENST00000535915 CXCL9Q07325 125 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 C4orf19Q8IY42 314 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 PPM1KQ8N3J5 372 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 C1orf131Q8NDD1 294 aaKnown RBP14.2□□□□□ -0.14
LDLR-203ENST00000535915 RMDN3Q96TC7 470 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 TIPINQ9BVW5 301 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 PDGFDQ9GZP0 370 aaPredicted RBP14.2□□□□□ -0.14
LDLR-203ENST00000535915 MYOZ2Q9NPC6 264 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 DOCK5Q9H7D0 1870 aa14.2□□□□□ -0.14
LDLR-203ENST00000535915 SGPL1O95470 568 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 ADRB2P07550 413 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 NCKAP1LP55160 1127 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 PSMC5P62195 406 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 GPC5P78333 572 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 DR1Q01658 176 aa14.19□□□□□ -0.14
LDLR-203ENST00000535915 MAP2K1Q02750 393 aaPredicted RBP14.19□□□□□ -0.14
LDLR-203ENST00000535915 MTMR3Q13615 1198 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms