RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 RAB3IPQ96QF0 476 aaPredicted RBP20.64■□□□□ 0.89
SMPD1-210ENST00000534405 P2RX7Q99572 595 aaKnown RBP20.64■□□□□ 0.89
SMPD1-210ENST00000534405 MTFR1LQ9H019 292 aa20.64■□□□□ 0.89
SMPD1-210ENST00000534405 OCEL1Q9H607 264 aa20.64■□□□□ 0.89
SMPD1-210ENST00000534405 TMEM165Q9HC07 324 aa20.64■□□□□ 0.89
SMPD1-210ENST00000534405 KCNQ5Q9NR82 932 aa20.64■□□□□ 0.89
SMPD1-210ENST00000534405 TLR2O60603 784 aa20.63■□□□□ 0.89
SMPD1-210ENST00000534405 ATP6V1G1O75348 118 aa20.63■□□□□ 0.89
SMPD1-210ENST00000534405 FOXR2Q6PJQ5 311 aa20.63■□□□□ 0.89
SMPD1-210ENST00000534405 GALNT8Q9NY28 637 aa20.63■□□□□ 0.89
SMPD1-210ENST00000534405 CYP39A1Q9NYL5 469 aa20.63■□□□□ 0.89
SMPD1-210ENST00000534405 CES2O00748 559 aa20.63■□□□□ 0.89
SMPD1-210ENST00000534405 PEX11AO75192 247 aa20.63■□□□□ 0.89
SMPD1-210ENST00000534405 PLA2G4BP0C869 781 aa20.63■□□□□ 0.89
SMPD1-210ENST00000534405 MEI1Q5TIA1 1274 aa20.63■□□□□ 0.89
SMPD1-210ENST00000534405 ENDOVQ8N8Q3 282 aaKnown RBP20.63■□□□□ 0.89
SMPD1-210ENST00000534405 ASAP3Q8TDY4 903 aa20.63■□□□□ 0.89
SMPD1-210ENST00000534405 AZIN2Q96A70 460 aa20.63■□□□□ 0.89
SMPD1-210ENST00000534405 FAM192AQ9GZU8 254 aa20.63■□□□□ 0.89
SMPD1-210ENST00000534405 INTS9Q9NV88 658 aaKnown RBP20.63■□□□□ 0.89
SMPD1-210ENST00000534405 GMEB1Q9Y692 573 aa20.63■□□□□ 0.89
SMPD1-210ENST00000534405 O00370 1275 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 ONECUT3O60422 494 aaPredicted RBP20.62■□□□□ 0.89
SMPD1-210ENST00000534405 MED24O75448 989 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 HLA-DOAP06340 250 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 SLC1A4P43007 532 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 TMC4Q7Z404 712 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 DNAJC9Q8WXX5 260 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 PRMT1Q99873 361 aaKnown RBP20.62■□□□□ 0.89
SMPD1-210ENST00000534405 SELENOSQ9BQE4 189 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 SCOCQ9UIL1 159 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 GGT7Q9UJ14 662 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 SMAPO00193 183 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 CYP11B2P19099 503 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 RASSF7Q02833 373 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 TCP10Q12799 353 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 HHIPL2Q6UWX4 724 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 GPBP1Q86WP2 473 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 SCFD2Q8WU76 684 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 SCFD1Q8WVM8 642 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 TEKT1Q969V4 418 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 PGM2Q96G03 612 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 NT5C3AQ9H0P0 336 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 RXFP1Q9HBX9 757 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 PREBQ9HCU5 417 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 PCDHA1Q9Y5I3 950 aa20.62■□□□□ 0.89
SMPD1-210ENST00000534405 KDM3AQ9Y4C1 1321 aa20.61■□□□□ 0.89
SMPD1-210ENST00000534405 SIPA1L1O43166 1804 aa20.61■□□□□ 0.89
SMPD1-210ENST00000534405 PALMO75781 387 aa20.61■□□□□ 0.89
SMPD1-210ENST00000534405 SUN1O94901 812 aa20.61■□□□□ 0.89
SMPD1-210ENST00000534405 EEF2P13639 858 aaKnown RBP20.61■□□□□ 0.89
SMPD1-210ENST00000534405 KIAA0825Q8IV33 1275 aa20.61■□□□□ 0.89
SMPD1-210ENST00000534405 ANO3Q9BYT9 981 aa20.61■□□□□ 0.89
SMPD1-210ENST00000534405 KCTD10Q9H3F6 313 aa20.61■□□□□ 0.89
SMPD1-210ENST00000534405 GJB6O95452 261 aa20.61■□□□□ 0.89
SMPD1-210ENST00000534405 SNAP25P60880 206 aa20.61■□□□□ 0.89
SMPD1-210ENST00000534405 PARP6Q2NL67 630 aa20.61■□□□□ 0.89
SMPD1-210ENST00000534405 ARSHQ5FYA8 562 aa20.61■□□□□ 0.89
SMPD1-210ENST00000534405 UTP4Q969X6 686 aaKnown RBP20.61■□□□□ 0.89
SMPD1-210ENST00000534405 TIPINQ9BVW5 301 aa20.61■□□□□ 0.89
SMPD1-210ENST00000534405 PNMA3Q9UL41 463 aa20.61■□□□□ 0.89
SMPD1-210ENST00000534405 TRIM33Q9UPN9 1127 aa20.61■□□□□ 0.89
SMPD1-210ENST00000534405 POTEFA5A3E0 1075 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 DDTLA6NHG4 134 aaPredicted RBP20.6■□□□□ 0.89
SMPD1-210ENST00000534405 MEIS2O14770 477 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 POTEIP0CG38 1075 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 MAGEA10P43363 369 aaPredicted RBP20.6■□□□□ 0.89
SMPD1-210ENST00000534405 CRKP46108 304 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 INHBCP55103 352 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 TDRD12Q587J7 1177 aaKnown RBP20.6■□□□□ 0.89
SMPD1-210ENST00000534405 HERC4Q5GLZ8 1057 aaPredicted RBP20.6■□□□□ 0.89
SMPD1-210ENST00000534405 FAM83BQ5T0W9 1011 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 POTEGQ6S5H5 508 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 POTEEQ6S8J3 1075 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 LONP2Q86WA8 852 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 SIAH1Q8IUQ4 282 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 TRIM59Q8IWR1 403 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 PIGOQ8TEQ8 1089 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 NCSTNQ92542 709 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 PTPRN2Q92932 1015 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 LSM14BQ9BX40 385 aaKnown RBP20.6■□□□□ 0.89
SMPD1-210ENST00000534405 EDEM3Q9BZQ6 932 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 TRIM7Q9C029 511 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 VCX3BQ9H321 246 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 VCX3AQ9NNX9 186 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 BMP2KQ9NSY1 1161 aaPredicted RBP20.6■□□□□ 0.89
SMPD1-210ENST00000534405 CTTNBP2NLQ9P2B4 639 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 SPATA31A6Q5VVP1 1343 aa20.6■□□□□ 0.89
SMPD1-210ENST00000534405 SSU72P8A0A1W2PR75 194 aa20.59■□□□□ 0.89
SMPD1-210ENST00000534405 OATP04181 439 aa20.59■□□□□ 0.89
SMPD1-210ENST00000534405 HOXA7P31268 230 aaPredicted RBP20.59■□□□□ 0.89
SMPD1-210ENST00000534405 DHX9Q08211 1270 aaKnown RBP20.59■□□□□ 0.89
SMPD1-210ENST00000534405 ENOX2Q16206 610 aaKnown RBP20.59■□□□□ 0.89
SMPD1-210ENST00000534405 CCDC65Q8IXS2 484 aa20.59■□□□□ 0.89
SMPD1-210ENST00000534405 CEP72Q9P209 647 aa20.59■□□□□ 0.89
SMPD1-210ENST00000534405 SLC4A7Q9Y6M7 1214 aa20.59■□□□□ 0.89
SMPD1-210ENST00000534405 FTCDO95954 541 aa20.59■□□□□ 0.89
SMPD1-210ENST00000534405 TAL1P17542 331 aaPredicted RBP20.59■□□□□ 0.89
SMPD1-210ENST00000534405 GSTT1P30711 240 aa20.59■□□□□ 0.89
SMPD1-210ENST00000534405 CASP5P51878 434 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms