RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 RPSAP08865 295 aaKnown RBP20.86■□□□□ 0.93
CAPN1-226ENST00000533820 PPATQ06203 517 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 RRP1BQ14684 758 aaKnown RBP20.86■□□□□ 0.93
CAPN1-226ENST00000533820 C6orf89Q6UWU4 347 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 ZNF720Q7Z2F6 126 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 PARD3BQ8TEW8 1205 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 SEMA4AQ9H3S1 761 aa20.86■□□□□ 0.93
CAPN1-226ENST00000533820 FOSP01100 380 aaPredicted RBP20.85■□□□□ 0.93
CAPN1-226ENST00000533820 RNF25Q96BH1 459 aaPredicted RBP20.85■□□□□ 0.93
CAPN1-226ENST00000533820 KLC4Q9NSK0 619 aa20.85■□□□□ 0.93
CAPN1-226ENST00000533820 IGLV3-22A0A075B6J6 115 aa20.85■□□□□ 0.93
CAPN1-226ENST00000533820 PMS2P54278 862 aa20.85■□□□□ 0.93
CAPN1-226ENST00000533820 PREPLQ4J6C6 727 aaPredicted RBP20.85■□□□□ 0.93
CAPN1-226ENST00000533820 HHIPL2Q6UWX4 724 aa20.85■□□□□ 0.93
CAPN1-226ENST00000533820 ARHGEF19Q8IW93 802 aa20.85■□□□□ 0.93
CAPN1-226ENST00000533820 C1orf131Q8NDD1 294 aaKnown RBP20.85■□□□□ 0.93
CAPN1-226ENST00000533820 TATDN2Q93075 761 aa20.85■□□□□ 0.93
CAPN1-226ENST00000533820 MKL1Q969V6 931 aa20.85■□□□□ 0.93
CAPN1-226ENST00000533820 POLR3CQ9BUI4 534 aaPredicted RBP20.85■□□□□ 0.93
CAPN1-226ENST00000533820 ARP10275 920 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 CHN1P15882 459 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 GAP43P17677 238 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 ZBTB10Q96DT7 871 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 A1CFQ9NQ94 594 aaKnown RBP20.84■□□□□ 0.93
CAPN1-226ENST00000533820 EMSYQ7Z589 1322 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 KIAA1755Q5JYT7 1200 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 AGBL2Q5U5Z8 902 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 GKAP1Q5VSY0 366 aaPredicted RBP20.84■□□□□ 0.93
CAPN1-226ENST00000533820 DENND2CQ68D51 928 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 NSMFQ6X4W1 530 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 MTFR1LQ9H019 292 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 DNAJC17Q9NVM6 304 aaKnown RBP20.84■□□□□ 0.93
CAPN1-226ENST00000533820 GGT7Q9UJ14 662 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 INTUQ9ULD6 942 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 GOLGA8IPA6NC78 632 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 GOLGA8JA6NMD2 632 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 CDR1P51861 262 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 BYSLQ13895 437 aaKnown RBP20.84■□□□□ 0.93
CAPN1-226ENST00000533820 DUPD1Q68J44 220 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 ZDHHC14Q8IZN3 488 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 EIF1ADQ8N9N8 165 aaKnown RBP20.84■□□□□ 0.93
CAPN1-226ENST00000533820 ACER1Q8TDN7 264 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 EPS8L3Q8TE67 593 aaKnown RBP20.84■□□□□ 0.93
CAPN1-226ENST00000533820 SCLT1Q96NL6 688 aa20.84■□□□□ 0.93
CAPN1-226ENST00000533820 POP1Q99575 1024 aaKnown RBP20.84■□□□□ 0.93
CAPN1-226ENST00000533820 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.84■□□□□ 0.93
CAPN1-226ENST00000533820 GTPBP10A4D1E9 387 aaKnown RBP20.83■□□□□ 0.93
CAPN1-226ENST00000533820 K7ENM7 598 aa20.83■□□□□ 0.93
CAPN1-226ENST00000533820 MMEP08473 750 aa20.83■□□□□ 0.93
CAPN1-226ENST00000533820 CRYMQ14894 314 aa20.83■□□□□ 0.93
CAPN1-226ENST00000533820 E2F5Q15329 346 aa20.83■□□□□ 0.93
CAPN1-226ENST00000533820 TMEM179Q6ZVK1 233 aa20.83■□□□□ 0.93
CAPN1-226ENST00000533820 PHLDB2Q86SQ0 1253 aa20.83■□□□□ 0.93
CAPN1-226ENST00000533820 RPUSD2Q8IZ73 545 aaKnown RBP20.83■□□□□ 0.93
CAPN1-226ENST00000533820 NEK9Q8TD19 979 aa20.83■□□□□ 0.93
CAPN1-226ENST00000533820 AGPAT1Q99943 283 aa20.83■□□□□ 0.93
CAPN1-226ENST00000533820 EPB41L4BQ9H329 900 aa20.83■□□□□ 0.93
CAPN1-226ENST00000533820 TMEM150BA6NC51 233 aa20.83■□□□□ 0.92
CAPN1-226ENST00000533820 FOXO6A8MYZ6 492 aa20.83■□□□□ 0.92
CAPN1-226ENST00000533820 HIP1RO75146 1068 aa20.83■□□□□ 0.92
CAPN1-226ENST00000533820 PPFIA2O75334 1257 aa20.83■□□□□ 0.92
CAPN1-226ENST00000533820 CALCAP01258 141 aa20.83■□□□□ 0.92
CAPN1-226ENST00000533820 RPL21P46778 160 aaKnown RBP20.83■□□□□ 0.92
CAPN1-226ENST00000533820 NPEPPSP55786 919 aa20.83■□□□□ 0.92
CAPN1-226ENST00000533820 ADCY2Q08462 1091 aa20.83■□□□□ 0.92
CAPN1-226ENST00000533820 BFSP1Q12934 665 aa20.83■□□□□ 0.92
CAPN1-226ENST00000533820 OTUD6AQ7L8S5 288 aa20.83■□□□□ 0.92
CAPN1-226ENST00000533820 MGARPQ8TDB4 240 aa20.83■□□□□ 0.92
CAPN1-226ENST00000533820 XPO6Q96QU8 1125 aaKnown RBP20.83■□□□□ 0.92
CAPN1-226ENST00000533820 FIZ1Q96SL8 496 aa20.83■□□□□ 0.92
CAPN1-226ENST00000533820 ZDHHC18Q9NUE0 388 aa20.83■□□□□ 0.92
CAPN1-226ENST00000533820 SPATS2LQ9NUQ6 558 aaKnown RBP20.83■□□□□ 0.92
CAPN1-226ENST00000533820 DBR1Q9UK59 544 aaKnown RBP20.83■□□□□ 0.92
CAPN1-226ENST00000533820 ENO4A6NNW6 628 aa20.82■□□□□ 0.92
CAPN1-226ENST00000533820 BHMG1C9JSJ3 638 aaPredicted RBP20.82■□□□□ 0.92
CAPN1-226ENST00000533820 CLSTN1O94985 981 aa20.82■□□□□ 0.92
CAPN1-226ENST00000533820 TTC27Q6P3X3 843 aa20.82■□□□□ 0.92
CAPN1-226ENST00000533820 YTHDF3Q7Z739 585 aaKnown RBP20.82■□□□□ 0.92
CAPN1-226ENST00000533820 ARMC2Q8NEN0 867 aa20.82■□□□□ 0.92
CAPN1-226ENST00000533820 TACO1Q9BSH4 297 aaKnown RBP20.82■□□□□ 0.92
CAPN1-226ENST00000533820 CARD9Q9H257 536 aa20.82■□□□□ 0.92
CAPN1-226ENST00000533820 ARHGEF35A5YM69 484 aa20.82■□□□□ 0.92
CAPN1-226ENST00000533820 ANKRD62A6NC57 917 aa20.82■□□□□ 0.92
CAPN1-226ENST00000533820 ANKRD63C9JTQ0 380 aa20.82■□□□□ 0.92
CAPN1-226ENST00000533820 KIAA0391O15091 583 aaKnown RBP20.82■□□□□ 0.92
CAPN1-226ENST00000533820 COMTP21964 271 aa20.82■□□□□ 0.92
CAPN1-226ENST00000533820 PPP3CAQ08209 521 aa20.82■□□□□ 0.92
CAPN1-226ENST00000533820 MAPK7Q13164 816 aa20.82■□□□□ 0.92
CAPN1-226ENST00000533820 CBWD1Q9BRT8 395 aa20.82■□□□□ 0.92
CAPN1-226ENST00000533820 LXNQ9BS40 222 aa20.82■□□□□ 0.92
CAPN1-226ENST00000533820 ZNF577Q9BSK1 485 aa20.82■□□□□ 0.92
CAPN1-226ENST00000533820 UNC45AQ9H3U1 944 aa20.82■□□□□ 0.92
CAPN1-226ENST00000533820 MLXIPLQ9NP71 852 aa20.82■□□□□ 0.92
CAPN1-226ENST00000533820 SUGT1Q9Y2Z0 365 aa20.82■□□□□ 0.92
CAPN1-226ENST00000533820 NCANO14594 1321 aa20.82■□□□□ 0.92
CAPN1-226ENST00000533820 TTC36A6NLP5 189 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 RGS16O15492 202 aaPredicted RBP20.81■□□□□ 0.92
CAPN1-226ENST00000533820 CIITAP33076 1130 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 ZDHHC24Q6UX98 284 aa20.81■□□□□ 0.92
CAPN1-226ENST00000533820 TAX1BP1Q86VP1 789 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms