RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, human

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-222	ENST00000533733	GGPS1	O95749	300 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	VCAM1	P19320	739 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	MFAP3	P55082	362 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	ARHGEF16	Q5VV41	709 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	PHLDB3	Q6NSJ2	640 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	ENOSF1	Q7L5Y1	443 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	EFCAB13	Q8IY85	973 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	MCPH1	Q8NEM0	835 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	IL31RA	Q8NI17	732 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	CASKIN2	Q8WXE0	1202 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	SEC14L1	Q92503	715 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	RUNDC3B	Q96NL0	473 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	TAAR1	Q96RJ0	339 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	RPS6KC1	Q96S38	1066 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	MOV10L1	Q9BXT6	1211 aa	Known RBP	12.94	□□□□□ -0.34
ATM-222	ENST00000533733	BCAS3	Q9H6U6	928 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	RAVER2	Q9HCJ3	691 aa	Known RBP	12.94	□□□□□ -0.34
ATM-222	ENST00000533733	SMARCAL1	Q9NZC9	954 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	NFU1	Q9UMS0	254 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	PACSIN2	Q9UNF0	486 aa	Predicted RBP	12.94	□□□□□ -0.34
ATM-222	ENST00000533733	PCDHA10	Q9Y5I2	948 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	MYPN	Q86TC9	1320 aa		12.94	□□□□□ -0.34
ATM-222	ENST00000533733	SRRM3	A6NNA2	597 aa	Predicted RBP	12.93	□□□□□ -0.34
ATM-222	ENST00000533733	C19orf81	C9J6K1	198 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	ATP2A1	O14983	1001 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	SART1	O43290	800 aa	Known RBP	12.93	□□□□□ -0.34
ATM-222	ENST00000533733	ZC3H11A	O75152	810 aa	Known RBP eCLIP	12.93	□□□□□ -0.34
ATM-222	ENST00000533733	PPFIA4	O75335	1185 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	CARS	P49589	748 aa	Known RBP	12.93	□□□□□ -0.34
ATM-222	ENST00000533733	GPC5	P78333	572 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	PLS1	Q14651	629 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	XKR9	Q5GH70	373 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	KRT39	Q6A163	491 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.93	□□□□□ -0.34
ATM-222	ENST00000533733	VSIG10L	Q86VR7	867 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	CDAN1	Q8IWY9	1227 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	CPXCR1	Q8N123	301 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	UBL4B	Q8N7F7	174 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	FAM107B	Q9H098	131 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	POLD4	Q9HCU8	107 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	UBE2T	Q9NPD8	197 aa	Predicted RBP	12.93	□□□□□ -0.34
ATM-222	ENST00000533733	LTBP3	Q9NS15	1303 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	SI	P14410	1827 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	FAM187A	A6NFU0	413 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	GOLGA6L10	A6NI86	522 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	HMGB1P1	B2RPK0	211 aa	Predicted RBP	12.93	□□□□□ -0.34
ATM-222	ENST00000533733	BUB1B	O60566	1050 aa	Predicted RBP	12.93	□□□□□ -0.34
ATM-222	ENST00000533733	DGAT1	O75907	488 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	ERLIN2	O94905	339 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	EIF2AK2	P19525	551 aa	Known RBP	12.93	□□□□□ -0.34
ATM-222	ENST00000533733	GART	P22102	1010 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	BACE1	P56817	501 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	DHX34	Q14147	1143 aa	Known RBP	12.93	□□□□□ -0.34
ATM-222	ENST00000533733	ARHGAP44	Q17R89	818 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	DALRD3	Q5D0E6	543 aa	Known RBP	12.93	□□□□□ -0.34
ATM-222	ENST00000533733	SLC30A10	Q6XR72	485 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	KSR1	Q8IVT5	923 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	SCYL3	Q8IZE3	742 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	ARFGAP2	Q8N6H7	521 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	IFT81	Q8WYA0	676 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	FBXL18	Q96ME1	805 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	GDAP1L1	Q96MZ0	367 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	ZIM3	Q96PE6	472 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	FAM129A	Q9BZQ8	928 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	RPAP3	Q9H6T3	665 aa	Predicted RBP	12.93	□□□□□ -0.34
ATM-222	ENST00000533733	KIAA1586	Q9HCI6	787 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	TMEM8A	Q9HCN3	771 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	ZNF112	Q9UJU3	913 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	TBX20	Q9UMR3	447 aa		12.93	□□□□□ -0.34
ATM-222	ENST00000533733	UTP11	Q9Y3A2	253 aa	Known RBP	12.93	□□□□□ -0.34
ATM-222	ENST00000533733	FOXN3	O00409	490 aa	Predicted RBP	12.92	□□□□□ -0.34
ATM-222	ENST00000533733	VWA5A	O00534	786 aa		12.92	□□□□□ -0.34
ATM-222	ENST00000533733	BACH1	O14867	736 aa		12.92	□□□□□ -0.34
ATM-222	ENST00000533733	PSAP	P07602	524 aa		12.92	□□□□□ -0.34
ATM-222	ENST00000533733	MYCL	P12524	364 aa	Predicted RBP	12.92	□□□□□ -0.34
ATM-222	ENST00000533733	DNA2	P51530	1060 aa		12.92	□□□□□ -0.34
ATM-222	ENST00000533733	GPC3	P51654	580 aa		12.92	□□□□□ -0.34
ATM-222	ENST00000533733	PEX3	P56589	373 aa		12.92	□□□□□ -0.34
ATM-222	ENST00000533733	PTEN	P60484	403 aa		12.92	□□□□□ -0.34
ATM-222	ENST00000533733	GNPTAB	Q3T906	1256 aa		12.92	□□□□□ -0.34
ATM-222	ENST00000533733	KLHL7	Q8IXQ5	586 aa		12.92	□□□□□ -0.34
ATM-222	ENST00000533733	FAM71A	Q8IYT1	594 aa		12.92	□□□□□ -0.34
ATM-222	ENST00000533733	TSEN2	Q8NCE0	465 aa	Known RBP	12.92	□□□□□ -0.34
ATM-222	ENST00000533733	NSUN6	Q8TEA1	469 aa	Known RBP	12.92	□□□□□ -0.34
ATM-222	ENST00000533733	CAPS2	Q9BXY5	557 aa		12.92	□□□□□ -0.34
ATM-222	ENST00000533733	RNF146	Q9NTX7	359 aa		12.92	□□□□□ -0.34
ATM-222	ENST00000533733	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	12.92	□□□□□ -0.34
ATM-222	ENST00000533733	RASAL2	Q9UJF2	1139 aa		12.92	□□□□□ -0.34
ATM-222	ENST00000533733	IGSF9B	Q9UPX0	1349 aa		12.92	□□□□□ -0.34
ATM-222	ENST00000533733	DDX3Y	O15523	660 aa	Known RBP	12.91	□□□□□ -0.34
ATM-222	ENST00000533733	DRG2	P55039	364 aa	Known RBP	12.91	□□□□□ -0.34
ATM-222	ENST00000533733	PPP3CA	Q08209	521 aa		12.91	□□□□□ -0.34
ATM-222	ENST00000533733	MTMR2	Q13614	643 aa		12.91	□□□□□ -0.34
ATM-222	ENST00000533733	HLTF	Q14527	1009 aa	Known RBP eCLIP	12.91	□□□□□ -0.34
ATM-222	ENST00000533733	SNRNP35	Q16560	246 aa	Known RBP	12.91	□□□□□ -0.34
ATM-222	ENST00000533733	BRDT	Q58F21	947 aa	Predicted RBP	12.91	□□□□□ -0.34
ATM-222	ENST00000533733	FAM102B	Q5T8I3	360 aa		12.91	□□□□□ -0.34
ATM-222	ENST00000533733	PPP1R2P3	Q6NXS1	205 aa		12.91	□□□□□ -0.34
ATM-222	ENST00000533733	RUFY4	Q6ZNE9	571 aa		12.91	□□□□□ -0.34
ATM-222	ENST00000533733	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.91	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms