RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 MKRN3Q13064 507 aaKnown RBP12.98□□□□□ -0.33
CLP1-205ENST00000533682 ALCAMQ13740 583 aa12.98□□□□□ -0.33
CLP1-205ENST00000533682 NAB2Q15742 525 aa12.98□□□□□ -0.33
CLP1-205ENST00000533682 INTS8Q75QN2 995 aaKnown RBP12.98□□□□□ -0.33
CLP1-205ENST00000533682 PALB2Q86YC2 1186 aa12.98□□□□□ -0.33
CLP1-205ENST00000533682 MAP4K3Q8IVH8 894 aa12.98□□□□□ -0.33
CLP1-205ENST00000533682 GLYCTKQ8IVS8 523 aa12.98□□□□□ -0.33
CLP1-205ENST00000533682 PROCA1Q8NCQ7 364 aaPredicted RBP12.98□□□□□ -0.33
CLP1-205ENST00000533682 MS4A14Q96JA4 679 aa12.98□□□□□ -0.33
CLP1-205ENST00000533682 NOX5Q96PH1 765 aa12.98□□□□□ -0.33
CLP1-205ENST00000533682 NTPCRQ9BSD7 190 aaKnown RBP12.98□□□□□ -0.33
CLP1-205ENST00000533682 TMEM117Q9H0C3 514 aa12.98□□□□□ -0.33
CLP1-205ENST00000533682 POLR3FQ9H1D9 316 aaPredicted RBP12.98□□□□□ -0.33
CLP1-205ENST00000533682 ZNF408Q9H9D4 720 aa12.98□□□□□ -0.33
CLP1-205ENST00000533682 SUGCTQ9HAC7 445 aa12.98□□□□□ -0.33
CLP1-205ENST00000533682 UBE2TQ9NPD8 197 aaPredicted RBP12.98□□□□□ -0.33
CLP1-205ENST00000533682 ACP6Q9NPH0 428 aa12.98□□□□□ -0.33
CLP1-205ENST00000533682 FBXL5Q9UKA1 691 aa12.98□□□□□ -0.33
CLP1-205ENST00000533682 MAFBQ9Y5Q3 323 aaPredicted RBP12.98□□□□□ -0.33
CLP1-205ENST00000533682 IGSF9BQ9UPX0 1349 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 ANO9A1A5B4 782 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 ZMYND10O75800 440 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 SASH3O75995 380 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 FARP2O94887 1054 aaPredicted RBP12.97□□□□□ -0.33
CLP1-205ENST00000533682 ZRANB2O95218 330 aaKnown RBP eCLIP12.97□□□□□ -0.33
CLP1-205ENST00000533682 ICAM3P32942 547 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 SOX5P35711 763 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 PRKCIP41743 596 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 MAP2K1Q02750 393 aaPredicted RBP12.97□□□□□ -0.33
CLP1-205ENST00000533682 CC2D1AQ6P1N0 951 aaPredicted RBP12.97□□□□□ -0.33
CLP1-205ENST00000533682 TMCO3Q6UWJ1 677 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 LNX1Q8TBB1 728 aaPredicted RBP12.97□□□□□ -0.33
CLP1-205ENST00000533682 KIFAP3Q92845 792 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 FGD4Q96M96 766 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 TIPINQ9BVW5 301 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 STK33Q9BYT3 514 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 FAM53CQ9NYF3 392 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 AGTPBP1Q9UPW5 1226 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 SOCS7O14512 581 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 HNRNPDLO14979 420 aaKnown RBP12.97□□□□□ -0.33
CLP1-205ENST00000533682 ATG7O95352 703 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 STAT1P42224 750 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 POLGP54098 1239 aaPredicted RBP12.97□□□□□ -0.33
CLP1-205ENST00000533682 VSNL1P62760 191 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 C2orf54Q08AI8 447 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 DRP2Q13474 957 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 XKR3Q5GH77 459 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 TRIM50Q86XT4 487 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 C12orf56Q8IXR9 622 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 U2AF1L4Q8WU68 220 aaKnown RBP12.97□□□□□ -0.33
CLP1-205ENST00000533682 POMGNT1Q8WZA1 660 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 SEMA4DQ92854 862 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 OSBPL9Q96SU4 736 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 ATP6V0A4Q9HBG4 840 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 ST7Q9NRC1 585 aa12.97□□□□□ -0.33
CLP1-205ENST00000533682 A0A0G2JMZ2 1700 aa12.96□□□□□ -0.33
CLP1-205ENST00000533682 CXCL11O14625 94 aa12.96□□□□□ -0.33
CLP1-205ENST00000533682 GGPS1O95749 300 aa12.96□□□□□ -0.33
CLP1-205ENST00000533682 EDNRBP24530 442 aa12.96□□□□□ -0.33
CLP1-205ENST00000533682 MARK3P27448 753 aa12.96□□□□□ -0.33
CLP1-205ENST00000533682 NF2P35240 595 aa12.96□□□□□ -0.33
CLP1-205ENST00000533682 MYBPC2Q14324 1141 aa12.96□□□□□ -0.33
CLP1-205ENST00000533682 EMC2Q15006 297 aa12.96□□□□□ -0.33
CLP1-205ENST00000533682 HSDL1Q3SXM5 330 aa12.96□□□□□ -0.33
CLP1-205ENST00000533682 GPAT2Q6NUI2 795 aa12.96□□□□□ -0.33
CLP1-205ENST00000533682 USP50Q70EL3 339 aaPredicted RBP12.96□□□□□ -0.33
CLP1-205ENST00000533682 CAGE1Q8TC20 777 aa12.96□□□□□ -0.33
CLP1-205ENST00000533682 ASAP3Q8TDY4 903 aa12.96□□□□□ -0.33
CLP1-205ENST00000533682 ALS2CR12Q96Q35 445 aa12.96□□□□□ -0.33
CLP1-205ENST00000533682 TAS2R14Q9NYV8 317 aa12.96□□□□□ -0.33
CLP1-205ENST00000533682 FBXO40Q9UH90 709 aa12.96□□□□□ -0.33
CLP1-205ENST00000533682 KCNH4Q9UQ05 1017 aa12.96□□□□□ -0.33
CLP1-205ENST00000533682 OATP04181 439 aa12.96□□□□□ -0.34
CLP1-205ENST00000533682 MATR3P43243 847 aaKnown RBP eCLIP12.96□□□□□ -0.34
CLP1-205ENST00000533682 LMBRD2Q68DH5 695 aaPredicted RBP12.96□□□□□ -0.34
CLP1-205ENST00000533682 HOMEZQ8IX15 550 aa12.96□□□□□ -0.34
CLP1-205ENST00000533682 PARD3BQ8TEW8 1205 aa12.96□□□□□ -0.34
CLP1-205ENST00000533682 SPIRE2Q8WWL2 714 aa12.96□□□□□ -0.34
CLP1-205ENST00000533682 COPS5Q92905 334 aa12.96□□□□□ -0.34
CLP1-205ENST00000533682 L3MBTL3Q96JM7 780 aaPredicted RBP12.96□□□□□ -0.34
CLP1-205ENST00000533682 ZBTB45Q96K62 511 aaPredicted RBP12.96□□□□□ -0.34
CLP1-205ENST00000533682 PORCNQ9H237 461 aa12.96□□□□□ -0.34
CLP1-205ENST00000533682 ARGLU1Q9NWB6 273 aaPredicted RBP12.96□□□□□ -0.34
CLP1-205ENST00000533682 BZW2Q9Y6E2 419 aaKnown RBP12.96□□□□□ -0.34
CLP1-205ENST00000533682 GRID2IPA4D2P6 1211 aa12.95□□□□□ -0.34
CLP1-205ENST00000533682 LRRIQ3A6PVS8 624 aaPredicted RBP12.95□□□□□ -0.34
CLP1-205ENST00000533682 TBC1D8O95759 1140 aa12.95□□□□□ -0.34
CLP1-205ENST00000533682 EDN1P05305 212 aa12.95□□□□□ -0.34
CLP1-205ENST00000533682 DLATP10515 647 aaKnown RBP12.95□□□□□ -0.34
CLP1-205ENST00000533682 TCF7P36402 384 aaPredicted RBP12.95□□□□□ -0.34
CLP1-205ENST00000533682 WNT7BP56706 349 aa12.95□□□□□ -0.34
CLP1-205ENST00000533682 RNASE9P60153 205 aaKnown RBP12.95□□□□□ -0.34
CLP1-205ENST00000533682 PPIL2Q13356 520 aa12.95□□□□□ -0.34
CLP1-205ENST00000533682 KCTD19Q17RG1 926 aaPredicted RBP12.95□□□□□ -0.34
CLP1-205ENST00000533682 EPC2Q52LR7 807 aa12.95□□□□□ -0.34
CLP1-205ENST00000533682 MAP1SQ66K74 1059 aaPredicted RBP12.95□□□□□ -0.34
CLP1-205ENST00000533682 RNF10Q8N5U6 811 aaKnown RBP12.95□□□□□ -0.34
CLP1-205ENST00000533682 MSANTD4Q8NCY6 345 aa12.95□□□□□ -0.34
CLP1-205ENST00000533682 MCPH1Q8NEM0 835 aa12.95□□□□□ -0.34
CLP1-205ENST00000533682 SLC20A1Q8WUM9 679 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms