RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 TWF2Q6IBS0 349 aaKnown RBP19.19■□□□□ 0.66
NXF1-216ENST00000533499 CNKSR3Q6P9H4 555 aa19.19■□□□□ 0.66
NXF1-216ENST00000533499 ZNF720Q7Z2F6 126 aa19.19■□□□□ 0.66
NXF1-216ENST00000533499 CDR2LQ86X02 465 aaPredicted RBP19.19■□□□□ 0.66
NXF1-216ENST00000533499 IFNLR1Q8IU57 520 aaPredicted RBP19.19■□□□□ 0.66
NXF1-216ENST00000533499 SYCP3Q8IZU3 236 aa19.19■□□□□ 0.66
NXF1-216ENST00000533499 GLIS3Q8NEA6 775 aa19.19■□□□□ 0.66
NXF1-216ENST00000533499 APBB2Q92870 758 aa19.19■□□□□ 0.66
NXF1-216ENST00000533499 NTPCRQ9BSD7 190 aaKnown RBP19.19■□□□□ 0.66
NXF1-216ENST00000533499 UBE2OQ9C0C9 1292 aaKnown RBP19.19■□□□□ 0.66
NXF1-216ENST00000533499 OLFML3Q9NRN5 406 aa19.19■□□□□ 0.66
NXF1-216ENST00000533499 PCDHB13Q9Y5F0 798 aa19.19■□□□□ 0.66
NXF1-216ENST00000533499 PFKMP08237 780 aa19.18■□□□□ 0.66
NXF1-216ENST00000533499 CASP5P51878 434 aa19.18■□□□□ 0.66
NXF1-216ENST00000533499 TCTN1Q2MV58 587 aa19.18■□□□□ 0.66
NXF1-216ENST00000533499 CAVIN1Q6NZI2 390 aaKnown RBP19.18■□□□□ 0.66
NXF1-216ENST00000533499 PSRC1Q6PGN9 363 aaPredicted RBP19.18■□□□□ 0.66
NXF1-216ENST00000533499 NELFCDQ8IXH7 590 aa19.18■□□□□ 0.66
NXF1-216ENST00000533499 ADAM2Q99965 735 aa19.18■□□□□ 0.66
NXF1-216ENST00000533499 TCHPQ9BT92 498 aa19.18■□□□□ 0.66
NXF1-216ENST00000533499 MRPL4Q9BYD3 311 aaKnown RBP19.18■□□□□ 0.66
NXF1-216ENST00000533499 CCDC113Q9H0I3 377 aa19.18■□□□□ 0.66
NXF1-216ENST00000533499 FZD8Q9H461 694 aa19.18■□□□□ 0.66
NXF1-216ENST00000533499 TMEM134Q9H6X4 195 aa19.18■□□□□ 0.66
NXF1-216ENST00000533499 TBX20Q9UMR3 447 aa19.18■□□□□ 0.66
NXF1-216ENST00000533499 ACKR2O00590 384 aa19.17■□□□□ 0.66
NXF1-216ENST00000533499 HARSP12081 509 aaKnown RBP19.17■□□□□ 0.66
NXF1-216ENST00000533499 ARF4P18085 180 aaPredicted RBP19.17■□□□□ 0.66
NXF1-216ENST00000533499 LIG4P49917 911 aa19.17■□□□□ 0.66
NXF1-216ENST00000533499 STK4Q13043 487 aa19.17■□□□□ 0.66
NXF1-216ENST00000533499 PSMD2Q13200 908 aa19.17■□□□□ 0.66
NXF1-216ENST00000533499 C16orf59Q7L2K0 433 aa19.17■□□□□ 0.66
NXF1-216ENST00000533499 TAS1R3Q7RTX0 852 aa19.17■□□□□ 0.66
NXF1-216ENST00000533499 ELOA2Q8IYF1 753 aaPredicted RBP19.17■□□□□ 0.66
NXF1-216ENST00000533499 RNF169Q8NCN4 708 aa19.17■□□□□ 0.66
NXF1-216ENST00000533499 SYAP1Q96A49 352 aaPredicted RBP19.17■□□□□ 0.66
NXF1-216ENST00000533499 GSDMAQ96QA5 445 aa19.17■□□□□ 0.66
NXF1-216ENST00000533499 ACCSQ96QU6 501 aa19.17■□□□□ 0.66
NXF1-216ENST00000533499 FIZ1Q96SL8 496 aa19.17■□□□□ 0.66
NXF1-216ENST00000533499 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.17■□□□□ 0.662e-10■■■■□ 20.7
NXF1-216ENST00000533499 TARS2Q9BW92 718 aaKnown RBP19.17■□□□□ 0.66
NXF1-216ENST00000533499 FTHL17Q9BXU8 183 aa19.17■□□□□ 0.66
NXF1-216ENST00000533499 TMX1Q9H3N1 280 aa19.17■□□□□ 0.66
NXF1-216ENST00000533499 AGPAT5Q9NUQ2 364 aa19.17■□□□□ 0.66
NXF1-216ENST00000533499 MAN1B1Q9UKM7 699 aa19.17■□□□□ 0.66
NXF1-216ENST00000533499 EXOC7Q9UPT5 735 aa19.17■□□□□ 0.66
NXF1-216ENST00000533499 MAPK8IP1Q9UQF2 711 aa19.17■□□□□ 0.66
NXF1-216ENST00000533499 GDAQ9Y2T3 454 aa19.17■□□□□ 0.66
NXF1-216ENST00000533499 TTLL13PA6NNM8 815 aa19.16■□□□□ 0.66
NXF1-216ENST00000533499 TULP1O00294 542 aaPredicted RBP19.16■□□□□ 0.66
NXF1-216ENST00000533499 HNRNPDLO14979 420 aaKnown RBP19.16■□□□□ 0.66
NXF1-216ENST00000533499 EDN1P05305 212 aa19.16■□□□□ 0.66
NXF1-216ENST00000533499 KCNJ6P48051 423 aa19.16■□□□□ 0.66
NXF1-216ENST00000533499 GTF2BQ00403 316 aa19.16■□□□□ 0.66
NXF1-216ENST00000533499 ALCAMQ13740 583 aa19.16■□□□□ 0.66
NXF1-216ENST00000533499 KCNB1Q14721 858 aa19.16■□□□□ 0.66
NXF1-216ENST00000533499 AMHR2Q16671 573 aa19.16■□□□□ 0.66
NXF1-216ENST00000533499 CCDC183Q5T5S1 534 aa19.16■□□□□ 0.66
NXF1-216ENST00000533499 NT5DC1Q5TFE4 455 aa19.16■□□□□ 0.66
NXF1-216ENST00000533499 ATF7IP2Q5U623 682 aa19.16■□□□□ 0.66
NXF1-216ENST00000533499 NOTUMQ6P988 496 aa19.16■□□□□ 0.66
NXF1-216ENST00000533499 PPP4R3CPQ6ZMV5 832 aa19.16■□□□□ 0.66
NXF1-216ENST00000533499 ZBTB33Q86T24 672 aa19.16■□□□□ 0.66
NXF1-216ENST00000533499 SMYD4Q8IYR2 804 aaPredicted RBP19.16■□□□□ 0.66
NXF1-216ENST00000533499 PRIMPOLQ96LW4 560 aa19.16■□□□□ 0.66
NXF1-216ENST00000533499 TRIM6Q9C030 488 aaPredicted RBP19.16■□□□□ 0.66
NXF1-216ENST00000533499 KIAA1468Q9P260 1216 aa19.16■□□□□ 0.66
NXF1-216ENST00000533499 ANKFY1Q9P2R3 1169 aa19.16■□□□□ 0.66
NXF1-216ENST00000533499 MGEA5O60502 916 aa19.15■□□□□ 0.66
NXF1-216ENST00000533499 RHOBTB3O94955 611 aa19.15■□□□□ 0.66
NXF1-216ENST00000533499 NPTXRO95502 500 aa19.15■□□□□ 0.66
NXF1-216ENST00000533499 ABCD1P33897 745 aa19.15■□□□□ 0.66
NXF1-216ENST00000533499 KCNA1Q09470 495 aa19.15■□□□□ 0.66
NXF1-216ENST00000533499 PCBP1Q15365 356 aaKnown RBP eCLIP19.15■□□□□ 0.66
NXF1-216ENST00000533499 FAM187BQ17R55 369 aa19.15■□□□□ 0.66
NXF1-216ENST00000533499 TMEM240Q5SV17 173 aa19.15■□□□□ 0.66
NXF1-216ENST00000533499 MYOCDQ8IZQ8 938 aa19.15■□□□□ 0.66
NXF1-216ENST00000533499 NOC3LQ8WTT2 800 aaKnown RBP19.15■□□□□ 0.66
NXF1-216ENST00000533499 VWCEQ96DN2 955 aa19.15■□□□□ 0.66
NXF1-216ENST00000533499 CHST12Q9NRB3 414 aa19.15■□□□□ 0.66
NXF1-216ENST00000533499 CNTNAP2Q9UHC6 1331 aa19.15■□□□□ 0.66
NXF1-216ENST00000533499 ABHD14A-ACY1A0A1B0GW23 586 aa19.14■□□□□ 0.65
NXF1-216ENST00000533499 N4BP3O15049 544 aa19.14■□□□□ 0.65
NXF1-216ENST00000533499 UPP2O95045 317 aa19.14■□□□□ 0.65
NXF1-216ENST00000533499 SCP2P22307 547 aa19.14■□□□□ 0.65
NXF1-216ENST00000533499 AXLP30530 894 aa19.14■□□□□ 0.65
NXF1-216ENST00000533499 HOXA11P31270 313 aaPredicted RBP19.14■□□□□ 0.65
NXF1-216ENST00000533499 EHHADHQ08426 723 aa19.14■□□□□ 0.65
NXF1-216ENST00000533499 SKOR2Q2VWA4 1001 aaPredicted RBP19.14■□□□□ 0.65
NXF1-216ENST00000533499 ZNF568Q3ZCX4 644 aa19.14■□□□□ 0.65
NXF1-216ENST00000533499 C9orf50Q5SZB4 431 aa19.14■□□□□ 0.65
NXF1-216ENST00000533499 EEF1DP3Q658K8 133 aa19.14■□□□□ 0.65
NXF1-216ENST00000533499 FAM117BQ6P1L5 589 aa19.14■□□□□ 0.65
NXF1-216ENST00000533499 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.14■□□□□ 0.65
NXF1-216ENST00000533499 KIAA0895Q8NCT3 520 aa19.14■□□□□ 0.65
NXF1-216ENST00000533499 HVCN1Q96D96 273 aa19.14■□□□□ 0.65
NXF1-216ENST00000533499 RNPC3Q96LT9 517 aaKnown RBP19.14■□□□□ 0.65
NXF1-216ENST00000533499 ACO2Q99798 780 aaKnown RBP19.14■□□□□ 0.65
NXF1-216ENST00000533499 ADPGKQ9BRR6 497 aa19.14■□□□□ 0.65
NXF1-216ENST00000533499 APOL6Q9BWW8 343 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms