RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 SYT2Q8N9I0 419 aaPredicted RBP20.7■□□□□ 0.9
GMDS-208ENST00000530927 KLHL23Q8NBE8 558 aa20.7■□□□□ 0.9
GMDS-208ENST00000530927 SMG8Q8ND04 991 aaKnown RBP20.7■□□□□ 0.9
GMDS-208ENST00000530927 SYMPKQ92797 1274 aaKnown RBP20.7■□□□□ 0.9
GMDS-208ENST00000530927 CCDC113Q9H0I3 377 aa20.7■□□□□ 0.9
GMDS-208ENST00000530927 NT5C3AQ9H0P0 336 aa20.7■□□□□ 0.9
GMDS-208ENST00000530927 RNF39Q9H2S5 420 aa20.7■□□□□ 0.9
GMDS-208ENST00000530927 INPP5FQ9Y2H2 1132 aa20.7■□□□□ 0.9
GMDS-208ENST00000530927 EOMESO95936 686 aa20.7■□□□□ 0.9
GMDS-208ENST00000530927 NAMPTP43490 491 aa20.7■□□□□ 0.9
GMDS-208ENST00000530927 NASPP49321 788 aaPredicted RBP20.7■□□□□ 0.9
GMDS-208ENST00000530927 PEX3P56589 373 aa20.7■□□□□ 0.9
GMDS-208ENST00000530927 MCM6Q14566 821 aa20.7■□□□□ 0.9
GMDS-208ENST00000530927 ABI1Q8IZP0 508 aa20.7■□□□□ 0.9
GMDS-208ENST00000530927 RASSF8Q8NHQ8 419 aa20.7■□□□□ 0.9
GMDS-208ENST00000530927 DEPTORQ8TB45 409 aa20.7■□□□□ 0.9
GMDS-208ENST00000530927 KIFAP3Q92845 792 aa20.7■□□□□ 0.9
GMDS-208ENST00000530927 CALML4Q96GE6 196 aa20.7■□□□□ 0.9
GMDS-208ENST00000530927 B4GALT3O60512 393 aa20.69■□□□□ 0.9
GMDS-208ENST00000530927 ITGB1P05556 798 aa20.69■□□□□ 0.9
GMDS-208ENST00000530927 NOTUMQ6P988 496 aa20.69■□□□□ 0.9
GMDS-208ENST00000530927 FAM43BQ6ZT52 329 aaPredicted RBP20.69■□□□□ 0.9
GMDS-208ENST00000530927 ZBTB8OSQ8IWT0 167 aa20.69■□□□□ 0.9
GMDS-208ENST00000530927 COLGALT1Q8NBJ5 622 aa20.69■□□□□ 0.9
GMDS-208ENST00000530927 LINC00301Q8NCQ3 95 aa20.69■□□□□ 0.9
GMDS-208ENST00000530927 APOL6Q9BWW8 343 aa20.69■□□□□ 0.9
GMDS-208ENST00000530927 FZD8Q9H461 694 aa20.69■□□□□ 0.9
GMDS-208ENST00000530927 PLAGL2Q9UPG8 496 aa20.69■□□□□ 0.9
GMDS-208ENST00000530927 ZDHHC9Q9Y397 364 aa20.69■□□□□ 0.9
GMDS-208ENST00000530927 IPPQ9Y573 584 aa20.69■□□□□ 0.9
GMDS-208ENST00000530927 PCDHGC5Q9Y5F6 944 aa20.69■□□□□ 0.9
GMDS-208ENST00000530927 A0A087X0B3 334 aa20.68■□□□□ 0.9
GMDS-208ENST00000530927 CCDC169A6NNP5 214 aa20.68■□□□□ 0.9
GMDS-208ENST00000530927 ZNF623O75123 536 aa20.68■□□□□ 0.9
GMDS-208ENST00000530927 OFD1O75665 1012 aa20.68■□□□□ 0.9
GMDS-208ENST00000530927 NPTXRO95502 500 aa20.68■□□□□ 0.9
GMDS-208ENST00000530927 PRKCBP05771 671 aa20.68■□□□□ 0.9
GMDS-208ENST00000530927 NPTX2P47972 431 aa20.68■□□□□ 0.9
GMDS-208ENST00000530927 CAMK1Q14012 370 aa20.68■□□□□ 0.9
GMDS-208ENST00000530927 STK38Q15208 465 aa20.68■□□□□ 0.9
GMDS-208ENST00000530927 SLC17A8Q8NDX2 589 aa20.68■□□□□ 0.9
GMDS-208ENST00000530927 RAD54LQ92698 747 aa20.68■□□□□ 0.9
GMDS-208ENST00000530927 MRPL38Q96DV4 380 aaKnown RBP20.68■□□□□ 0.9
GMDS-208ENST00000530927 IFT74Q96LB3 600 aa20.68■□□□□ 0.9
GMDS-208ENST00000530927 C11orf84Q9BUA3 381 aaPredicted RBP20.68■□□□□ 0.9
GMDS-208ENST00000530927 CCSER1Q9C0I3 900 aa20.68■□□□□ 0.9
GMDS-208ENST00000530927 NXF3Q9H4D5 531 aaKnown RBP20.68■□□□□ 0.9
GMDS-208ENST00000530927 HOXA2O43364 376 aa20.67■□□□□ 0.9
GMDS-208ENST00000530927 RB1P06400 928 aa20.67■□□□□ 0.9
GMDS-208ENST00000530927 GUCY2CP25092 1073 aa20.67■□□□□ 0.9
GMDS-208ENST00000530927 RAB27AP51159 221 aa20.67■□□□□ 0.9
GMDS-208ENST00000530927 SKIV2LQ15477 1246 aaKnown RBP20.67■□□□□ 0.9
GMDS-208ENST00000530927 EEF1DP3Q658K8 133 aa20.67■□□□□ 0.9
GMDS-208ENST00000530927 PPP4R3CPQ6ZMV5 832 aa20.67■□□□□ 0.9
GMDS-208ENST00000530927 TAS1R3Q7RTX0 852 aa20.67■□□□□ 0.9
GMDS-208ENST00000530927 MRPL10Q7Z7H8 261 aaKnown RBP20.67■□□□□ 0.9
GMDS-208ENST00000530927 GPBP1Q86WP2 473 aa20.67■□□□□ 0.9
GMDS-208ENST00000530927 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.67■□□□□ 0.9
GMDS-208ENST00000530927 LRRC43Q8N309 656 aa20.67■□□□□ 0.9
GMDS-208ENST00000530927 KRI1Q8N9T8 703 aaKnown RBP20.67■□□□□ 0.9
GMDS-208ENST00000530927 PANK2Q9BZ23 570 aa20.67■□□□□ 0.9
GMDS-208ENST00000530927 PDZD7Q9H5P4 517 aa20.67■□□□□ 0.9
GMDS-208ENST00000530927 PRMT7Q9NVM4 692 aaPredicted RBP20.67■□□□□ 0.9
GMDS-208ENST00000530927 RNF216Q9NWF9 866 aaPredicted RBP20.67■□□□□ 0.9
GMDS-208ENST00000530927 RWDD3Q9Y3V2 267 aa20.67■□□□□ 0.9
GMDS-208ENST00000530927 CNTNAP2Q9UHC6 1331 aa20.66■□□□□ 0.9
GMDS-208ENST00000530927 A0A1B0GUA9 196 aa20.66■□□□□ 0.9
GMDS-208ENST00000530927 NT5C1B-RDH14C9J2C7 533 aa20.66■□□□□ 0.9
GMDS-208ENST00000530927 SLC16A4O15374 487 aa20.66■□□□□ 0.9
GMDS-208ENST00000530927 AXLP30530 894 aa20.66■□□□□ 0.9
GMDS-208ENST00000530927 PPP2R5AQ15172 486 aa20.66■□□□□ 0.9
GMDS-208ENST00000530927 NT5DC1Q5TFE4 455 aa20.66■□□□□ 0.9
GMDS-208ENST00000530927 SPPL3Q8TCT6 385 aa20.66■□□□□ 0.9
GMDS-208ENST00000530927 REEP2Q9BRK0 252 aa20.66■□□□□ 0.9
GMDS-208ENST00000530927 C2orf40Q9H1Z8 148 aa20.66■□□□□ 0.9
GMDS-208ENST00000530927 SPTLC2O15270 562 aa20.65■□□□□ 0.9
GMDS-208ENST00000530927 SKIP12755 728 aa20.65■□□□□ 0.9
GMDS-208ENST00000530927 NCLP19338 710 aaKnown RBP20.65■□□□□ 0.9
GMDS-208ENST00000530927 AKAP5P24588 427 aa20.65■□□□□ 0.9
GMDS-208ENST00000530927 IRS1P35568 1242 aa20.65■□□□□ 0.9
GMDS-208ENST00000530927 DNM1Q05193 864 aaKnown RBP20.65■□□□□ 0.9
GMDS-208ENST00000530927 PRPF4BQ13523 1007 aaKnown RBP20.65■□□□□ 0.9
GMDS-208ENST00000530927 PCBP1Q15365 356 aaKnown RBP eCLIP20.65■□□□□ 0.93e-6■■□□□ 12.8
GMDS-208ENST00000530927 MAPK6Q16659 721 aa20.65■□□□□ 0.9
GMDS-208ENST00000530927 FAM187BQ17R55 369 aa20.65■□□□□ 0.9
GMDS-208ENST00000530927 NAALADL2Q58DX5 795 aa20.65■□□□□ 0.9
GMDS-208ENST00000530927 NOMO2Q5JPE7 1267 aa20.65■□□□□ 0.9
GMDS-208ENST00000530927 GLB1LQ6UWU2 654 aa20.65■□□□□ 0.9
GMDS-208ENST00000530927 DRC1Q96MC2 740 aa20.65■□□□□ 0.9
GMDS-208ENST00000530927 ZNF396Q96N95 335 aaPredicted RBP20.65■□□□□ 0.9
GMDS-208ENST00000530927 PLVAPQ9BX97 442 aa20.65■□□□□ 0.9
GMDS-208ENST00000530927 GBP3Q9H0R5 595 aa20.65■□□□□ 0.9
GMDS-208ENST00000530927 CXCL16Q9H2A7 254 aa20.65■□□□□ 0.9
GMDS-208ENST00000530927 RSAD1Q9HA92 442 aa20.65■□□□□ 0.9
GMDS-208ENST00000530927 TBC1D13Q9NVG8 400 aa20.65■□□□□ 0.9
GMDS-208ENST00000530927 DNAJB4Q9UDY4 337 aa20.65■□□□□ 0.9
GMDS-208ENST00000530927 ACKR2O00590 384 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 FGF18O76093 207 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 POMCP01189 267 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 TFF2Q03403 129 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms