RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 IZUMO2Q6UXV1 221 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 ZNF554Q86TJ5 538 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 C17orf50Q8WW18 174 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 ZNF653Q96CK0 615 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 MAGEB18Q96M61 343 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 NR1H4Q96RI1 486 aaPredicted RBP15.15■□□□□ 0.02
PCF11-204ENST00000530660 RANBP17Q9H2T7 1088 aaKnown RBP15.15■□□□□ 0.02
PCF11-204ENST00000530660 STK32BQ9NY57 414 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 CIDEBQ9UHD4 219 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 KIF1AQ12756 1690 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 LMTK3Q96Q04 1460 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 RAD21O60216 631 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 POLD1P28340 1107 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 ADARP55265 1226 aaKnown RBP15.15■□□□□ 0.02
PCF11-204ENST00000530660 LRRC41Q15345 812 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 ASIC2Q16515 512 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 ARL6IP4Q66PJ3 421 aaKnown RBP15.15■□□□□ 0.02
PCF11-204ENST00000530660 ISCA1Q9BUE6 129 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 MIS12Q9H081 205 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 STXBP5LQ9Y2K9 1186 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 CAMTA1Q9Y6Y1 1673 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 SPDYE16A6NNV3 312 aaPredicted RBP15.14■□□□□ 0.01
PCF11-204ENST00000530660 OPHN1O60890 802 aa15.14■□□□□ 0.01
PCF11-204ENST00000530660 PYGMP11217 842 aa15.14■□□□□ 0.01
PCF11-204ENST00000530660 SEC23AQ15436 765 aa15.14■□□□□ 0.01
PCF11-204ENST00000530660 GSTA3Q16772 222 aa15.14■□□□□ 0.01
PCF11-204ENST00000530660 SRRM1Q8IYB3 904 aaKnown RBP15.14■□□□□ 0.01
PCF11-204ENST00000530660 DNAJC17Q9NVM6 304 aaKnown RBP15.14■□□□□ 0.01
PCF11-204ENST00000530660 TRIM43BA6NCK2 446 aa15.14■□□□□ 0.01
PCF11-204ENST00000530660 ANKRD63C9JTQ0 380 aa15.14■□□□□ 0.01
PCF11-204ENST00000530660 MKRN3Q13064 507 aaKnown RBP15.14■□□□□ 0.01
PCF11-204ENST00000530660 MAPK7Q13164 816 aa15.14■□□□□ 0.01
PCF11-204ENST00000530660 ALKBH5Q6P6C2 394 aaKnown RBP15.14■□□□□ 0.01
PCF11-204ENST00000530660 SLF2Q8IX21 1173 aa15.14■□□□□ 0.01
PCF11-204ENST00000530660 LZICQ8WZA0 190 aa15.14■□□□□ 0.01
PCF11-204ENST00000530660 PITPNM2Q9BZ72 1349 aa15.14■□□□□ 0.01
PCF11-204ENST00000530660 CSF1RP07333 972 aa15.14■□□□□ 0.01
PCF11-204ENST00000530660 SLC15A3Q8IY34 581 aa15.14■□□□□ 0.01
PCF11-204ENST00000530660 SYN2Q92777 582 aaPredicted RBP15.14■□□□□ 0.01
PCF11-204ENST00000530660 PHF12Q96QT6 1004 aa15.14■□□□□ 0.01
PCF11-204ENST00000530660 SIKE1Q9BRV8 207 aa15.14■□□□□ 0.01
PCF11-204ENST00000530660 EDEM3Q9BZQ6 932 aa15.14■□□□□ 0.01
PCF11-204ENST00000530660 BRD8Q9H0E9 1235 aa15.14■□□□□ 0.01
PCF11-204ENST00000530660 SUCLA2Q9P2R7 463 aaPredicted RBP15.14■□□□□ 0.01
PCF11-204ENST00000530660 NAGPAQ9UK23 515 aa15.14■□□□□ 0.01
PCF11-204ENST00000530660 PHTF1Q9UMS5 762 aa15.14■□□□□ 0.01
PCF11-204ENST00000530660 NUP188Q5SRE5 1749 aa15.13■□□□□ 0.01
PCF11-204ENST00000530660 FAM205AQ6ZU69 1335 aa15.13■□□□□ 0.01
PCF11-204ENST00000530660 R3HDM1Q15032 1099 aaKnown RBP15.13■□□□□ 0.01
PCF11-204ENST00000530660 SLC44A4Q53GD3 710 aa15.13■□□□□ 0.01
PCF11-204ENST00000530660 LRRC55Q6ZSA7 311 aa15.13■□□□□ 0.01
PCF11-204ENST00000530660 CROCCP2Q86T23 111 aa15.13■□□□□ 0.01
PCF11-204ENST00000530660 ENAHQ8N8S7 591 aaPredicted RBP15.13■□□□□ 0.01
PCF11-204ENST00000530660 STMN2Q93045 179 aa15.13■□□□□ 0.01
PCF11-204ENST00000530660 ZNF512BQ96KM6 892 aaPredicted RBP15.13■□□□□ 0.01
PCF11-204ENST00000530660 OSGEPQ9NPF4 335 aa15.13■□□□□ 0.01
PCF11-204ENST00000530660 USP40Q9NVE5 1235 aa15.13■□□□□ 0.01
PCF11-204ENST00000530660 MTRF1LQ9UGC7 380 aaKnown RBP15.13■□□□□ 0.01
PCF11-204ENST00000530660 SUN2Q9UH99 717 aa15.13■□□□□ 0.01
PCF11-204ENST00000530660 PPP1R9AQ9ULJ8 1098 aa15.13■□□□□ 0.01
PCF11-204ENST00000530660 CAPN15O75808 1086 aa15.13■□□□□ 0.01
PCF11-204ENST00000530660 PABPC4LP0CB38 370 aaKnown RBP15.13■□□□□ 0.01
PCF11-204ENST00000530660 SH3D19Q5HYK7 790 aa15.13■□□□□ 0.01
PCF11-204ENST00000530660 DYMQ7RTS9 669 aa15.13■□□□□ 0.01
PCF11-204ENST00000530660 TMEM110Q86TL2 294 aa15.13■□□□□ 0.01
PCF11-204ENST00000530660 VGLL2Q8N8G2 317 aa15.13■□□□□ 0.01
PCF11-204ENST00000530660 HES6Q96HZ4 224 aa15.13■□□□□ 0.01
PCF11-204ENST00000530660 NACAP1Q9BZK3 213 aa15.13■□□□□ 0.01
PCF11-204ENST00000530660 STX18Q9P2W9 335 aaKnown RBP15.13■□□□□ 0.01
PCF11-204ENST00000530660 ZNF180Q9UJW8 692 aa15.13■□□□□ 0.01
PCF11-204ENST00000530660 EXOC3O60645 756 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 GLI3P10071 1580 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 ACTN1P12814 892 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 OXCT1P55809 520 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 TXNRD1Q16881 649 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 PHLDB3Q6NSJ2 640 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 OLFML1Q6UWY5 402 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 MTDHQ86UE4 582 aaKnown RBP15.12■□□□□ 0.01
PCF11-204ENST00000530660 SCYL3Q8IZE3 742 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 SPATA5Q8NB90 893 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 KCNN1Q92952 543 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 GRAMD1AQ96CP6 724 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 CATSPER2Q96P56 530 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 UNC45AQ9H3U1 944 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 TLE6Q9H808 572 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 NKIRAS1Q9NYS0 192 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 PTPN22Q9Y2R2 807 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 POTEJP0CG39 1038 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 RARGP13631 454 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 WDR4P57081 412 aaKnown RBP15.12■□□□□ 0.01
PCF11-204ENST00000530660 MOGSQ13724 837 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 THOC5Q13769 683 aaKnown RBP15.12■□□□□ 0.01
PCF11-204ENST00000530660 CNNM4Q6P4Q7 775 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 THEMISQ8N1K5 641 aaPredicted RBP15.12■□□□□ 0.01
PCF11-204ENST00000530660 PDCD7Q8N8D1 485 aaKnown RBP15.12■□□□□ 0.01
PCF11-204ENST00000530660 MARCH10Q8NA82 808 aaPredicted RBP15.12■□□□□ 0.01
PCF11-204ENST00000530660 SDR42E1Q8WUS8 393 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 TSPAN18Q96SJ8 248 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 DDX43Q9NXZ2 648 aaKnown RBP15.12■□□□□ 0.01
PCF11-204ENST00000530660 TBC1D30Q9Y2I9 924 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms