RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 TSPAN1O60635 241 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 KINO60870 393 aaKnown RBP15.43■□□□□ 0.06
USF1-209ENST00000529476 ERLIN2O94905 339 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 PRKCBP05771 671 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 FOSL2P15408 326 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 NMT1P30419 496 aaKnown RBP15.43■□□□□ 0.06
USF1-209ENST00000529476 EFNA5P52803 228 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 IKBKEQ14164 716 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 AMHR2Q16671 573 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 KANK3Q6NY19 840 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 UNC13DQ70J99 1090 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 TAS1R3Q7RTX0 852 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 HAUS6Q7Z4H7 955 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 RTN4RL1Q86UN2 441 aaPredicted RBP15.43■□□□□ 0.06
USF1-209ENST00000529476 FAM178BQ8IXR5 827 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 TMEM161BQ8NDZ6 487 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 LINC01599Q8WXQ3 324 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 HERVK_113Q902F9 699 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 HPS3Q969F9 1004 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 FZD8Q9H461 694 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 CXXC1Q9P0U4 656 aaPredicted RBP15.43■□□□□ 0.06
USF1-209ENST00000529476 KCNG1Q9UIX4 513 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 USP20Q9Y2K6 914 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 PTPRSQ13332 1948 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 PHLPP2Q6ZVD8 1323 aa15.43■□□□□ 0.06
USF1-209ENST00000529476 CDH23Q9H251 3354 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 ABHD14A-ACY1A0A1B0GW23 586 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 PVALEFA0A1B0GWK0 134 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 DENND3A2RUS2 1198 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 TTLL13PA6NNM8 815 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 ZBBXA8MT70 800 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 K7ERI5 159 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 BAIAP3O94812 1187 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 EDN1P05305 212 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 MYL1P05976 194 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 MAPTP10636 758 aaKnown RBP15.42■□□□□ 0.06
USF1-209ENST00000529476 PLA2G5P39877 138 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 DPYDQ12882 1025 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 PNOCQ13519 176 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 DSC3Q14574 896 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 POSTNQ15063 836 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 MAPK6Q16659 721 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 ZC2HC1CQ53FD0 456 aaPredicted RBP15.42■□□□□ 0.06
USF1-209ENST00000529476 TJAP1Q5JTD0 557 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 PPP4R3CPQ6ZMV5 832 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 CPB2Q96IY4 423 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 ADAM2Q99965 735 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 FTHL17Q9BXU8 183 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 FGFBP2Q9BYJ0 223 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 TMEM134Q9H6X4 195 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 MRPL44Q9H9J2 332 aaKnown RBP15.42■□□□□ 0.06
USF1-209ENST00000529476 AGPAT5Q9NUQ2 364 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 PRMT7Q9NVM4 692 aaPredicted RBP15.42■□□□□ 0.06
USF1-209ENST00000529476 SEL1LQ9UBV2 794 aa15.42■□□□□ 0.06
USF1-209ENST00000529476 PIN4Q9Y237 131 aaKnown RBP15.42■□□□□ 0.06
USF1-209ENST00000529476 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.41■□□□□ 0.06
USF1-209ENST00000529476 ENPP3O14638 875 aa15.41■□□□□ 0.06
USF1-209ENST00000529476 RPN1P04843 607 aaKnown RBP15.41■□□□□ 0.06
USF1-209ENST00000529476 ARF4P18085 180 aaPredicted RBP15.41■□□□□ 0.06
USF1-209ENST00000529476 HOXA11P31270 313 aaPredicted RBP15.41■□□□□ 0.06
USF1-209ENST00000529476 MCM4P33991 863 aa15.41■□□□□ 0.06
USF1-209ENST00000529476 CASP5P51878 434 aa15.41■□□□□ 0.06
USF1-209ENST00000529476 WDR5P61964 334 aaKnown RBP15.41■□□□□ 0.06
USF1-209ENST00000529476 EHHADHQ08426 723 aa15.41■□□□□ 0.06
USF1-209ENST00000529476 PRPF4BQ13523 1007 aaKnown RBP15.41■□□□□ 0.06
USF1-209ENST00000529476 PCBP1Q15365 356 aaKnown RBP eCLIP15.41■□□□□ 0.06
USF1-209ENST00000529476 FAM187BQ17R55 369 aa15.41■□□□□ 0.06
USF1-209ENST00000529476 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.41■□□□□ 0.06
USF1-209ENST00000529476 ZNF720Q7Z2F6 126 aa15.41■□□□□ 0.06
USF1-209ENST00000529476 GPT2Q8TD30 523 aa15.41■□□□□ 0.06
USF1-209ENST00000529476 ERCC4Q92889 916 aaPredicted RBP15.41■□□□□ 0.06
USF1-209ENST00000529476 CCDC34Q96HJ3 373 aa15.41■□□□□ 0.06
USF1-209ENST00000529476 RNPC3Q96LT9 517 aaKnown RBP15.41■□□□□ 0.06
USF1-209ENST00000529476 OLFML3Q9NRN5 406 aa15.41■□□□□ 0.06
USF1-209ENST00000529476 H0YCG3 227 aa15.4■□□□□ 0.06
USF1-209ENST00000529476 ACKR2O00590 384 aa15.4■□□□□ 0.06
USF1-209ENST00000529476 GCNT3O95395 438 aa15.4■□□□□ 0.06
USF1-209ENST00000529476 MYBP10242 640 aa15.4■□□□□ 0.06
USF1-209ENST00000529476 ZSCAN20P17040 1043 aaPredicted RBP15.4■□□□□ 0.06
USF1-209ENST00000529476 DEFB103AP81534 67 aa15.4■□□□□ 0.06
USF1-209ENST00000529476 STRN3Q13033 797 aa15.4■□□□□ 0.06
USF1-209ENST00000529476 KMT5BQ4FZB7 885 aa15.4■□□□□ 0.06
USF1-209ENST00000529476 FAM26FQ5R3K3 315 aa15.4■□□□□ 0.06
USF1-209ENST00000529476 NT5DC1Q5TFE4 455 aa15.4■□□□□ 0.06
USF1-209ENST00000529476 RASIP1Q5U651 963 aa15.4■□□□□ 0.06
USF1-209ENST00000529476 CDR2LQ86X02 465 aaPredicted RBP15.4■□□□□ 0.06
USF1-209ENST00000529476 GLIS3Q8NEA6 775 aa15.4■□□□□ 0.06
USF1-209ENST00000529476 PRIMPOLQ96LW4 560 aa15.4■□□□□ 0.06
USF1-209ENST00000529476 TSPYL2Q9H2G4 693 aaPredicted RBP15.4■□□□□ 0.06
USF1-209ENST00000529476 ST6GALNAC4Q9H4F1 302 aa15.4■□□□□ 0.06
USF1-209ENST00000529476 CHST12Q9NRB3 414 aa15.4■□□□□ 0.06
USF1-209ENST00000529476 RGS18Q9NS28 235 aa15.4■□□□□ 0.06
USF1-209ENST00000529476 EXOC1Q9NV70 894 aa15.4■□□□□ 0.06
USF1-209ENST00000529476 TBX20Q9UMR3 447 aa15.4■□□□□ 0.06
USF1-209ENST00000529476 CNTNAP2Q9UHC6 1331 aa15.4■□□□□ 0.06
USF1-209ENST00000529476 EFCAB14O75071 495 aa15.39■□□□□ 0.05
USF1-209ENST00000529476 PPP1R37O75864 691 aa15.39■□□□□ 0.05
USF1-209ENST00000529476 IBSPP21815 317 aaPredicted RBP15.39■□□□□ 0.05
USF1-209ENST00000529476 AXLP30530 894 aa15.39■□□□□ 0.05
USF1-209ENST00000529476 KCNJ6P48051 423 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms