RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 ZNF623O75123 536 aa21.36■■□□□ 1.01
SSRP1-204ENST00000529002 SFPQP23246 707 aaKnown RBP eCLIP21.36■■□□□ 1.01
SSRP1-204ENST00000529002 ZC3H14Q6PJT7 736 aaKnown RBP21.36■■□□□ 1.01
SSRP1-204ENST00000529002 CATSPER4Q7RTX7 472 aa21.36■■□□□ 1.01
SSRP1-204ENST00000529002 RHPN2Q8IUC4 686 aa21.36■■□□□ 1.01
SSRP1-204ENST00000529002 TEX2Q8IWB9 1127 aa21.36■■□□□ 1.01
SSRP1-204ENST00000529002 ZNF713Q8N859 430 aaPredicted RBP21.36■■□□□ 1.01
SSRP1-204ENST00000529002 GLT8D2Q9H1C3 349 aa21.36■■□□□ 1.01
SSRP1-204ENST00000529002 UNC45AQ9H3U1 944 aa21.36■■□□□ 1.01
SSRP1-204ENST00000529002 GOLGA8AA7E2F4 631 aa21.35■■□□□ 1.01
SSRP1-204ENST00000529002 GOLGA8BA8MQT2 603 aa21.35■■□□□ 1.01
SSRP1-204ENST00000529002 MSH4O15457 936 aa21.35■■□□□ 1.01
SSRP1-204ENST00000529002 ZBTB43O43298 467 aa21.35■■□□□ 1.01
SSRP1-204ENST00000529002 STBD1O95210 358 aa21.35■■□□□ 1.01
SSRP1-204ENST00000529002 ALDH2P05091 517 aa21.35■■□□□ 1.01
SSRP1-204ENST00000529002 NECTIN1Q15223 517 aa21.35■■□□□ 1.01
SSRP1-204ENST00000529002 NONOQ15233 471 aaKnown RBP eCLIP21.35■■□□□ 1.01
SSRP1-204ENST00000529002 PHLDB3Q6NSJ2 640 aa21.35■■□□□ 1.01
SSRP1-204ENST00000529002 DCLRE1AQ6PJP8 1040 aa21.35■■□□□ 1.01
SSRP1-204ENST00000529002 GET4Q7L5D6 327 aaPredicted RBP21.35■■□□□ 1.01
SSRP1-204ENST00000529002 B3GALT6Q96L58 329 aa21.35■■□□□ 1.01
SSRP1-204ENST00000529002 NLRP4Q96MN2 994 aa21.35■■□□□ 1.01
SSRP1-204ENST00000529002 RPS6KC1Q96S38 1066 aa21.35■■□□□ 1.01
SSRP1-204ENST00000529002 SUCLA2Q9P2R7 463 aaPredicted RBP21.35■■□□□ 1.01
SSRP1-204ENST00000529002 GLUD1P00367 558 aa21.34■■□□□ 1.01
SSRP1-204ENST00000529002 SOD2P04179 222 aa21.34■■□□□ 1.01
SSRP1-204ENST00000529002 URODP06132 367 aa21.34■■□□□ 1.01
SSRP1-204ENST00000529002 SKIP12755 728 aa21.34■■□□□ 1.01
SSRP1-204ENST00000529002 PFKFB3Q16875 520 aaPredicted RBP21.34■■□□□ 1.01
SSRP1-204ENST00000529002 PALB2Q86YC2 1186 aa21.34■■□□□ 1.01
SSRP1-204ENST00000529002 GLYCTKQ8IVS8 523 aa21.34■■□□□ 1.01
SSRP1-204ENST00000529002 REXO1Q8N1G1 1221 aaKnown RBP21.34■■□□□ 1.01
SSRP1-204ENST00000529002 URGCPQ8TCY9 931 aa21.34■■□□□ 1.01
SSRP1-204ENST00000529002 STAMQ92783 540 aa21.34■■□□□ 1.01
SSRP1-204ENST00000529002 FAM193BQ96PV7 902 aaPredicted RBP21.34■■□□□ 1.01
SSRP1-204ENST00000529002 HERC2P3Q9BVR0 1158 aa21.34■■□□□ 1.01
SSRP1-204ENST00000529002 NUMBLQ9Y6R0 609 aa21.34■■□□□ 1.01
SSRP1-204ENST00000529002 IGKV6-21A0A0C4DH24 114 aa21.33■■□□□ 1.01
SSRP1-204ENST00000529002 LAMP2P13473 410 aa21.33■■□□□ 1.01
SSRP1-204ENST00000529002 CIITAP33076 1130 aa21.33■■□□□ 1.01
SSRP1-204ENST00000529002 RAB27AP51159 221 aa21.33■■□□□ 1.01
SSRP1-204ENST00000529002 HTR4Q13639 388 aa21.33■■□□□ 1.01
SSRP1-204ENST00000529002 PJA1Q8NG27 643 aa21.33■■□□□ 1.01
SSRP1-204ENST00000529002 ZMYND12Q9H0C1 365 aa21.33■■□□□ 1.01
SSRP1-204ENST00000529002 RSAD1Q9HA92 442 aa21.33■■□□□ 1.01
SSRP1-204ENST00000529002 PIDD1Q9HB75 910 aa21.33■■□□□ 1.01
SSRP1-204ENST00000529002 CARNS1A5YM72 827 aa21.32■■□□□ 1
SSRP1-204ENST00000529002 GAS7O60861 476 aa21.32■■□□□ 1
SSRP1-204ENST00000529002 ADH1AP07327 375 aa21.32■■□□□ 1
SSRP1-204ENST00000529002 ADD1P35611 737 aaKnown RBP21.32■■□□□ 1
SSRP1-204ENST00000529002 EXOSC10Q01780 885 aaKnown RBP21.32■■□□□ 1
SSRP1-204ENST00000529002 UBXN11Q5T124 520 aa21.32■■□□□ 1
SSRP1-204ENST00000529002 KIAA0319Q5VV43 1072 aa21.32■■□□□ 1
SSRP1-204ENST00000529002 PGBD4Q96DM1 585 aa21.32■■□□□ 1
SSRP1-204ENST00000529002 TMEM175Q9BSA9 504 aa21.32■■□□□ 1
SSRP1-204ENST00000529002 NIFKQ9BYG3 293 aaKnown RBP21.32■■□□□ 1
SSRP1-204ENST00000529002 IFT122Q9HBG6 1241 aa21.32■■□□□ 1
SSRP1-204ENST00000529002 NAP1L2Q9ULW6 460 aaPredicted RBP21.32■■□□□ 1
SSRP1-204ENST00000529002 MTF2Q9Y483 593 aaPredicted RBP21.32■■□□□ 1
SSRP1-204ENST00000529002 CACNA1GO43497 2377 aa21.32■■□□□ 1
SSRP1-204ENST00000529002 KLF18A0A0U1RQI7 1052 aa21.31■■□□□ 1
SSRP1-204ENST00000529002 ANHXE9PGG2 379 aa21.31■■□□□ 1
SSRP1-204ENST00000529002 KINO60870 393 aaKnown RBP21.31■■□□□ 1
SSRP1-204ENST00000529002 OR1G1P47890 313 aa21.31■■□□□ 1
SSRP1-204ENST00000529002 ATXN1P54253 815 aaKnown RBP21.31■■□□□ 1
SSRP1-204ENST00000529002 GPC5P78333 572 aa21.31■■□□□ 1
SSRP1-204ENST00000529002 MRPL10Q7Z7H8 261 aaKnown RBP21.31■■□□□ 1
SSRP1-204ENST00000529002 ZNF410Q86VK4 478 aa21.31■■□□□ 1
SSRP1-204ENST00000529002 RSPH1Q8WYR4 309 aa21.31■■□□□ 1
SSRP1-204ENST00000529002 SLC5A5Q92911 643 aa21.31■■□□□ 1
SSRP1-204ENST00000529002 CCDC136Q96JN2 1154 aa21.31■■□□□ 1
SSRP1-204ENST00000529002 NT5C3AQ9H0P0 336 aa21.31■■□□□ 1
SSRP1-204ENST00000529002 MINDY3Q9H8M7 445 aa21.31■■□□□ 1
SSRP1-204ENST00000529002 C6orf50Q9HD87 102 aa21.31■■□□□ 1
SSRP1-204ENST00000529002 AGPAT5Q9NUQ2 364 aa21.31■■□□□ 1
SSRP1-204ENST00000529002 NCDNQ9UBB6 729 aa21.31■■□□□ 1
SSRP1-204ENST00000529002 ESYT2A0FGR8 921 aa21.3■■□□□ 1
SSRP1-204ENST00000529002 RPL17P18621 184 aaKnown RBP21.3■■□□□ 1
SSRP1-204ENST00000529002 GLUD2P49448 558 aa21.3■■□□□ 1
SSRP1-204ENST00000529002 DNM2P50570 870 aa21.3■■□□□ 1
SSRP1-204ENST00000529002 SNW1Q13573 536 aaKnown RBP21.3■■□□□ 1
SSRP1-204ENST00000529002 VARS2Q5ST30 1063 aaKnown RBP21.3■■□□□ 1
SSRP1-204ENST00000529002 LRCH2Q5VUJ6 765 aa21.3■■□□□ 1
SSRP1-204ENST00000529002 PLA2G4FQ68DD2 849 aa21.3■■□□□ 1
SSRP1-204ENST00000529002 MIER3Q7Z3K6 550 aa21.3■■□□□ 1
SSRP1-204ENST00000529002 COLGALT2Q8IYK4 626 aa21.3■■□□□ 1
SSRP1-204ENST00000529002 RNF168Q8IYW5 571 aaPredicted RBP21.3■■□□□ 1
SSRP1-204ENST00000529002 FGF14Q92915 247 aa21.3■■□□□ 1
SSRP1-204ENST00000529002 NXPE3Q969Y0 559 aa21.3■■□□□ 1
SSRP1-204ENST00000529002 TEKT3Q9BXF9 490 aa21.3■■□□□ 1
SSRP1-204ENST00000529002 INO80BQ9C086 356 aaPredicted RBP21.3■■□□□ 1
SSRP1-204ENST00000529002 RNF39Q9H2S5 420 aa21.3■■□□□ 1
SSRP1-204ENST00000529002 RXFP1Q9HBX9 757 aa21.3■■□□□ 1
SSRP1-204ENST00000529002 SLC2A4RGQ9NR83 387 aa21.3■■□□□ 1
SSRP1-204ENST00000529002 MIOSQ9NXC5 875 aa21.3■■□□□ 1
SSRP1-204ENST00000529002 DDX11L8A8MPP1 907 aa21.29■■□□□ 1
SSRP1-204ENST00000529002 TGM5O43548 720 aa21.29■■□□□ 1
SSRP1-204ENST00000529002 GAS2O43903 313 aaKnown RBP21.29■■□□□ 1
SSRP1-204ENST00000529002 MAFO75444 373 aaPredicted RBP21.29■■□□□ 1
SSRP1-204ENST00000529002 EFEMP2O95967 443 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms