RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 LMNB2Q03252 620 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 SFSWAPQ12872 951 aaKnown RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 ACVR2BQ13705 512 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 TMED2Q15363 201 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 AMHR2Q16671 573 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 SLC4A8Q2Y0W8 1093 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 CNPY1Q3B7I2 92 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 C6orf163Q5TEZ5 329 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 SMYD5Q6GMV2 418 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 VSTM1Q6UX27 236 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 EPM2AIP1Q7L775 607 aaPredicted RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 SYNE4Q8N205 404 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 NME8Q8N427 588 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 ZBTB38Q8NAP3 1195 aaPredicted RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 PHC3Q8NDX5 983 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 SLC35G2Q8TBE7 412 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 HES6Q96HZ4 224 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 ZNF184Q99676 751 aaPredicted RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 CDC42EP4Q9H3Q1 356 aaKnown RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 ERVK-5Q9HDB9 667 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 SH3GLB2Q9NR46 395 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 PRKAG3Q9UGI9 489 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 SEC63Q9UGP8 760 aaKnown RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 HDAC9Q9UKV0 1011 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 PHTF1Q9UMS5 762 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 PHF24Q9UPV7 400 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 TBX22Q9Y458 520 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 RGPD2P0DJD1 1756 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 LAMB4A4D0S4 1761 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 LRP6O75581 1613 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 A0A0A6YYK5 440 aaPredicted RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 RASA4BC9J798 803 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 USP17L12C9JPN9 530 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 BHMG1C9JSJ3 638 aaPredicted RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 USP17L21D6R901 530 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 PDLIM1O00151 329 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 SNAP23O00161 211 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 RASA4O43374 803 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 KRT36O76013 467 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 HNRNPCP07910 306 aaKnown RBP eCLIP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 SLC9A1P19634 815 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 STAT1P42224 750 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 DRG2P55039 364 aaKnown RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 USP46P62068 366 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 OCRLQ01968 901 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 SLC34A1Q06495 639 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 MGAT5Q09328 741 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 TMED1Q13445 227 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 CALCRLQ16602 461 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 KHDC1Q4VXA5 237 aaKnown RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 HERC4Q5GLZ8 1057 aaPredicted RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 UBAP2Q5T6F2 1119 aaKnown RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 TMCO4Q5TGY1 634 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 OLFML2BQ68BL8 750 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 GALNT17Q6IS24 598 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 CCDC62Q6P9F0 684 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 NEK8Q86SG6 692 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 CCDC65Q8IXS2 484 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 ARHGAP24Q8N264 748 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 GLIS3Q8NEA6 775 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 IWS1Q96ST2 819 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 UBA5Q9GZZ9 404 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 TRMT112Q9UI30 125 aaKnown RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 SERPINA10Q9UK55 444 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 ANGPTL2Q9UKU9 493 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 BLOC1S6Q9UL45 172 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 PPP1R9AQ9ULJ8 1098 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 RPL26L1Q9UNX3 145 aaKnown RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 CHMP2BQ9UQN3 213 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 USP20Q9Y2K6 914 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 AXIN2Q9Y2T1 843 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 RTCBQ9Y3I0 505 aaKnown RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 TMEM94Q12767 1356 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 FAM196BA6NMK8 535 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 FOXO6A8MYZ6 492 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 SMAPO00193 183 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 IRS4O14654 1257 aaPredicted RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 HNRNPRO43390 633 aaKnown RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 CCDC22O60826 627 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 BAG2O95816 211 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 TROVE2P10155 538 aaKnown RBP eCLIP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 XRCC5P13010 732 aaKnown RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 RASA1P20936 1047 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 NR2F2P24468 414 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 SERPINB3P29508 390 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 YARSP54577 528 aaKnown RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 POU5F1Q01860 360 aaKnown RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 COASYQ13057 564 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 SPARCL1Q14515 664 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 GSTA3Q16772 222 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 TAF1BQ53T94 588 aaPredicted RBP5.04□□□□□ -1.6
HIPK3-204ENST00000525975 FOXB2Q5VYV0 432 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 PHLDB2Q86SQ0 1253 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 TRIM59Q8IWR1 403 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 SH3TC2Q8TF17 1288 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 FAM136AQ96C01 138 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 HAUS1Q96CS2 278 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 ISCA1Q9BUE6 129 aa5.04□□□□□ -1.6
HIPK3-204ENST00000525975 SPATA16Q9BXB7 569 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms