RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 MUM1L1Q5H9M0 696 aa5.88□□□□□ -1.47
CD44-220ENST00000525688 FAM43BQ6ZT52 329 aaPredicted RBP5.88□□□□□ -1.47
CD44-220ENST00000525688 BCL6BQ8N143 479 aaPredicted RBP5.88□□□□□ -1.47
CD44-220ENST00000525688 FAM43AQ8N2R8 423 aa5.88□□□□□ -1.47
CD44-220ENST00000525688 STPG3Q8N7X2 389 aa5.88□□□□□ -1.47
CD44-220ENST00000525688 DIS3LQ8TF46 1054 aaKnown RBP5.88□□□□□ -1.47
CD44-220ENST00000525688 C1GALT1C1Q96EU7 318 aa5.88□□□□□ -1.47
CD44-220ENST00000525688 SLC39A13Q96H72 371 aa5.88□□□□□ -1.47
CD44-220ENST00000525688 FDXACB1Q9BRP7 624 aaPredicted RBP5.88□□□□□ -1.47
CD44-220ENST00000525688 SOX7Q9BT81 388 aa5.88□□□□□ -1.47
CD44-220ENST00000525688 OSBPL6Q9BZF3 934 aa5.88□□□□□ -1.47
CD44-220ENST00000525688 NSUN3Q9H649 340 aaKnown RBP5.88□□□□□ -1.47
CD44-220ENST00000525688 DCP1AQ9NPI6 582 aaPredicted RBP5.88□□□□□ -1.47
CD44-220ENST00000525688 SAP30BPQ9UHR5 308 aaKnown RBP5.88□□□□□ -1.47
CD44-220ENST00000525688 FHAD1B1AJZ9 1412 aa5.88□□□□□ -1.47
CD44-220ENST00000525688 ADAMTS12P58397 1594 aa5.88□□□□□ -1.47
CD44-220ENST00000525688 CCDC189A1A4V9 331 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 KNG1P01042 644 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 MCAMP43121 646 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 NRG3P56975 720 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 UAP1L1Q3KQV9 507 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 GJC2Q5T442 439 aaPredicted RBP5.87□□□□□ -1.47
CD44-220ENST00000525688 WDR78Q5VTH9 848 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 KSR2Q6VAB6 950 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 PRR23BQ6ZRT6 265 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 CATIPQ7Z7H3 387 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 GLB1L2Q8IW92 636 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 TTC17Q96AE7 1141 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 TIFAQ96CG3 184 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 MVB12AQ96EY5 273 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 DYDC2Q96IM9 177 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 FAM193BQ96PV7 902 aaPredicted RBP5.87□□□□□ -1.47
CD44-220ENST00000525688 DIRC2Q96SL1 478 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 MAP3K14Q99558 947 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 GCM1Q9NP62 436 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 JADE2Q9NQC1 790 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 DDX21Q9NR30 783 aaKnown RBP eCLIP5.87□□□□□ -1.47
CD44-220ENST00000525688 MAN1C1Q9NR34 630 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.87□□□□□ -1.47
CD44-220ENST00000525688 DDX20Q9UHI6 824 aaKnown RBP5.87□□□□□ -1.47
CD44-220ENST00000525688 LIMCH1Q9UPQ0 1083 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 KIF27Q86VH2 1401 aa5.87□□□□□ -1.47
CD44-220ENST00000525688 CLASP1Q7Z460 1538 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 GRIN2AQ12879 1464 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 FRMPD2Q68DX3 1309 aaPredicted RBP5.86□□□□□ -1.47
CD44-220ENST00000525688 A0A0G2JNJ9 132 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 H3BML4 177 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 DTNBO60941 627 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 HRGP04196 525 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 COL6A1P12109 1028 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 PHKG2P15735 406 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 BDNFP23560 247 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 CCT2P78371 535 aaKnown RBP5.86□□□□□ -1.47
CD44-220ENST00000525688 MEF2AQ02078 507 aaPredicted RBP5.86□□□□□ -1.47
CD44-220ENST00000525688 OS9Q13438 667 aaPredicted RBP5.86□□□□□ -1.47
CD44-220ENST00000525688 GALEQ14376 348 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 MAN2A1Q16706 1144 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 WDR72Q3MJ13 1102 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 PRR31Q5SQ13 230 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 PHF19Q5T6S3 580 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 KLHDC10Q6PID8 442 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 SRGAP1Q7Z6B7 1085 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 STK32CQ86UX6 486 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 GLB1L3Q8NCI6 653 aaPredicted RBP5.86□□□□□ -1.47
CD44-220ENST00000525688 SVIPQ8NHG7 77 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 NRG4Q8WWG1 115 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 NOX5Q96PH1 765 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 ACO2Q99798 780 aaKnown RBP5.86□□□□□ -1.47
CD44-220ENST00000525688 POLR3BQ9NW08 1133 aaPredicted RBP5.86□□□□□ -1.47
CD44-220ENST00000525688 SAE1Q9UBE0 346 aaPredicted RBP5.86□□□□□ -1.47
CD44-220ENST00000525688 Q9UFV3 132 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 DNM3Q9UQ16 869 aa5.86□□□□□ -1.47
CD44-220ENST00000525688 NUP160Q12769 1436 aa5.85□□□□□ -1.47
CD44-220ENST00000525688 A0A1W2PR48 441 aa5.85□□□□□ -1.47
CD44-220ENST00000525688 CCDC154A6NI56 674 aa5.85□□□□□ -1.47
CD44-220ENST00000525688 H0Y858 1186 aa5.85□□□□□ -1.47
CD44-220ENST00000525688 CCER2I3L3R5 266 aa5.85□□□□□ -1.47
CD44-220ENST00000525688 GSPT1P15170 499 aaKnown RBP5.85□□□□□ -1.47
CD44-220ENST00000525688 FXR1P51114 621 aaKnown RBP eCLIP5.85□□□□□ -1.47
CD44-220ENST00000525688 USP14P54578 494 aa5.85□□□□□ -1.47
CD44-220ENST00000525688 EPHB3P54753 998 aa5.85□□□□□ -1.47
CD44-220ENST00000525688 PPP3CAQ08209 521 aa5.85□□□□□ -1.47
CD44-220ENST00000525688 MGAT2Q10469 447 aa5.85□□□□□ -1.47
CD44-220ENST00000525688 EIF4HQ15056 248 aaKnown RBP5.85□□□□□ -1.47
CD44-220ENST00000525688 PGS1Q32NB8 556 aa5.85□□□□□ -1.47
CD44-220ENST00000525688 TMEM132EQ6IEE7 984 aa5.85□□□□□ -1.47
CD44-220ENST00000525688 LMBR1LQ6UX01 489 aa5.85□□□□□ -1.47
CD44-220ENST00000525688 SAMD3Q8N6K7 520 aa5.85□□□□□ -1.47
CD44-220ENST00000525688 PJA1Q8NG27 643 aa5.85□□□□□ -1.47
CD44-220ENST00000525688 NKD2Q969F2 451 aaPredicted RBP5.85□□□□□ -1.47
CD44-220ENST00000525688 IL17RAQ96F46 866 aa5.85□□□□□ -1.47
CD44-220ENST00000525688 ZSWIM3Q96MP5 696 aa5.85□□□□□ -1.47
CD44-220ENST00000525688 ADI1Q9BV57 179 aa5.85□□□□□ -1.47
CD44-220ENST00000525688 CHST12Q9NRB3 414 aa5.85□□□□□ -1.47
CD44-220ENST00000525688 RBM12Q9NTZ6 932 aaKnown RBP5.85□□□□□ -1.47
CD44-220ENST00000525688 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.85□□□□□ -1.47
CD44-220ENST00000525688 ARHGEF11O15085 1522 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 ANO9A1A5B4 782 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 TUSC2O75896 110 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 POLD1P28340 1107 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms