RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 IGSF22Q8N9C0 903 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 CCDC51Q96ER9 411 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 NFKBIZQ9BYH8 718 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 TBC1D13Q9NVG8 400 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 INPP5FQ9Y2H2 1132 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 STK24Q9Y6E0 443 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 CNTNAP2Q9UHC6 1331 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 MYH11P35749 1972 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 LAD1O00515 517 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 CYP11B2P19099 503 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 NCLP19338 710 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 PRPHP41219 470 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 BCAR1P56945 870 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 IL17AQ16552 155 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 SMG8Q8ND04 991 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 MICAL1Q8TDZ2 1067 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 CPB2Q96IY4 423 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 EIF2AQ9BY44 585 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 NRDE2Q9H7Z3 1164 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 TLE6Q9H808 572 aa12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC4-204ENST00000524797 KRT17Q04695 432 aa12.38□□□□□ -0.43
TRAPPC4-204ENST00000524797 DUSP6Q16828 381 aa12.38□□□□□ -0.43
TRAPPC4-204ENST00000524797 RILPL1Q5EBL4 403 aa12.38□□□□□ -0.43
TRAPPC4-204ENST00000524797 PLPP4Q5VZY2 271 aa12.38□□□□□ -0.43
TRAPPC4-204ENST00000524797 NOTUMQ6P988 496 aa12.38□□□□□ -0.43
TRAPPC4-204ENST00000524797 CNNM3Q8NE01 707 aa12.38□□□□□ -0.43
TRAPPC4-204ENST00000524797 URGCPQ8TCY9 931 aa12.38□□□□□ -0.43
TRAPPC4-204ENST00000524797 SNX29Q8TEQ0 813 aa12.38□□□□□ -0.43
TRAPPC4-204ENST00000524797 BSNDQ8WZ55 320 aa12.38□□□□□ -0.43
TRAPPC4-204ENST00000524797 BACH2Q9BYV9 841 aa12.38□□□□□ -0.43
TRAPPC4-204ENST00000524797 RAB34Q9BZG1 259 aa12.38□□□□□ -0.43
TRAPPC4-204ENST00000524797 CSRNP2Q9H175 543 aa12.38□□□□□ -0.43
TRAPPC4-204ENST00000524797 RSAD1Q9HA92 442 aa12.38□□□□□ -0.43
TRAPPC4-204ENST00000524797 PUF60Q9UHX1 559 aaKnown RBP12.38□□□□□ -0.43
TRAPPC4-204ENST00000524797 LRRIQ4A6NIV6 560 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 PP2D1A8MPX8 630 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 NT5C1B-RDH14C9J2C7 533 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 ZC3H11AO75152 810 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 GLP2RO95838 553 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 ITGA4P13612 1032 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 ARF4P18085 180 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 CUL4AQ13619 759 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 CLUL1Q15846 466 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 CDCA2Q69YH5 1023 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 DTHD1Q6ZMT9 781 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 RBM23Q86U06 439 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 FAM178BQ8IXR5 827 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 TCF25Q9BQ70 676 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 ENTPD7Q9NQZ7 604 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 DDX19AQ9NUU7 478 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 CLEC1BQ9P126 229 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 CD207Q9UJ71 328 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 KIAA1024Q9UPX6 916 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 FAM50BQ9Y247 325 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 IPPQ9Y573 584 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 B4GALT5O43286 388 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 MBTPS2O43462 519 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 B4GALT3O60512 393 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 NDUFV1P49821 464 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 ATP2C1P98194 919 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 RNASELQ05823 741 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 NCBP1Q09161 790 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 SMAD4Q13485 552 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 LARP1BQ659C4 914 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 MSLNLQ96KJ4 702 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 CDCA3Q99618 268 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 RNF39Q9H2S5 420 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 DNAJB4Q9UDY4 337 aa12.37□□□□□ -0.43
TRAPPC4-204ENST00000524797 CARNS1A5YM72 827 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 PER2O15055 1255 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 INPPL1O15357 1258 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 EYA4O95677 639 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 GALTP07902 379 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 SLC11A1P49279 550 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 ALDH7A1P49419 539 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 AFF1P51825 1210 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 FAM187BQ17R55 369 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 KRT79Q5XKE5 535 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 ZNF280BQ86YH2 543 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 ZBTB8OSQ8IWT0 167 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 VN1R2Q8NFZ6 395 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 BCL7CQ8WUZ0 217 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 TMEM169Q96HH4 297 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 MMTAG2Q9BU76 263 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 GBP3Q9H0R5 595 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 C2orf40Q9H1Z8 148 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 BHMT2Q9H2M3 363 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 FZD8Q9H461 694 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 NGRNQ9NPE2 291 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 CD320Q9NPF0 282 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 UBN1Q9NPG3 1134 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 PRMT7Q9NVM4 692 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 BDP1A6H8Y1 2624 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 A0A0C4DFX4 3053 aa12.36□□□□□ -0.43
TRAPPC4-204ENST00000524797 MYH15Q9Y2K3 1946 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 FSD2A1L4K1 749 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 HIDE1A8MVS5 230 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 E9PMD0 336 aa12.35□□□□□ -0.43
TRAPPC4-204ENST00000524797 DDHD2O94830 711 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms