RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 ERVK-5Q9HDB9 667 aa9.64□□□□□ -0.87
PKP3-202ENST00000524646 ZDHHC18Q9NUE0 388 aa9.64□□□□□ -0.87
PKP3-202ENST00000524646 TAS2R14Q9NYV8 317 aa9.64□□□□□ -0.87
PKP3-202ENST00000524646 FEM1BQ9UK73 627 aa9.64□□□□□ -0.87
PKP3-202ENST00000524646 COG5Q9UP83 839 aa9.64□□□□□ -0.87
PKP3-202ENST00000524646 USP20Q9Y2K6 914 aa9.64□□□□□ -0.87
PKP3-202ENST00000524646 RLFQ13129 1914 aa9.64□□□□□ -0.87
PKP3-202ENST00000524646 ZNF536O15090 1300 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 C5orf60A6NFR6 353 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 SPDYE2BA6NHP3 402 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 E7EVH7 732 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 H0YIN7 160 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 ZBTB39O15060 712 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 LYPLA2O95372 231 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 SPDYE6P0CI01 402 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 ALAS1P13196 640 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 PLS3P13797 630 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 CTNNA2P26232 953 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 CHRNA3P32297 505 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 FLT3P36888 993 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 VAMP7P51809 220 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 DRP2Q13474 957 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 PRPF4BQ13523 1007 aaKnown RBP9.63□□□□□ -0.87
PKP3-202ENST00000524646 PLCB4Q15147 1175 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 GRIPAP1Q4V328 841 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 PHLDB3Q6NSJ2 640 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 ZDHHC24Q6UX98 284 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 LDHDQ86WU2 507 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 SUGP1Q8IWZ8 645 aaKnown RBP9.63□□□□□ -0.87
PKP3-202ENST00000524646 RPUSD2Q8IZ73 545 aaKnown RBP9.63□□□□□ -0.87
PKP3-202ENST00000524646 OTUD6BQ8N6M0 293 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 FAM151AQ8WW52 585 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 ALG3Q92685 438 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 KAT2BQ92831 832 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 CNKSR1Q969H4 720 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 HOOK2Q96ED9 719 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 PRMT6Q96LA8 375 aaPredicted RBP9.63□□□□□ -0.87
PKP3-202ENST00000524646 RUNDC3BQ96NL0 473 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 RPS6KC1Q96S38 1066 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 CCT8L2Q96SF2 557 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 PSMD1Q99460 953 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 ERP44Q9BS26 406 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 FAM129AQ9BZQ8 928 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 ST6GALNAC4Q9H4F1 302 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 CTTNBP2NLQ9P2B4 639 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 LARSQ9P2J5 1176 aaKnown RBP9.63□□□□□ -0.87
PKP3-202ENST00000524646 PARP2Q9UGN5 583 aa9.63□□□□□ -0.87
PKP3-202ENST00000524646 WDR90Q96KV7 1748 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 YDJCA8MPS7 323 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 TMEM110-MUSTN1A8MSY1 372 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 TCP10L2B9ZVM9 353 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 DDX39AO00148 427 aaKnown RBP9.62□□□□□ -0.87
PKP3-202ENST00000524646 FOXN3O00409 490 aaPredicted RBP9.62□□□□□ -0.87
PKP3-202ENST00000524646 KIAA0391O15091 583 aaKnown RBP9.62□□□□□ -0.87
PKP3-202ENST00000524646 PPIP5K2O43314 1243 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 TRAPPC3O43617 180 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 RTN2O75298 545 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 ICAM1P05362 532 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 P4HBP07237 508 aaKnown RBP9.62□□□□□ -0.87
PKP3-202ENST00000524646 ADRB2P07550 413 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 USP8P40818 1118 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 PTGIRP43119 386 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 MARCKSL1P49006 195 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 FNTAP49354 379 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 RARRES1P49788 294 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 DRG2P55039 364 aaKnown RBP9.62□□□□□ -0.87
PKP3-202ENST00000524646 NCKAP1LP55160 1127 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 PPP3CAQ08209 521 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 IFFO1Q0D2I5 559 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 ZNF211Q13398 564 aaPredicted RBP9.62□□□□□ -0.87
PKP3-202ENST00000524646 SKIDA1Q1XH10 827 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 SPDYE2Q495Y8 402 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 C1orf220Q5T0J3 134 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 ICE2Q659A1 982 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 DENND2CQ68D51 928 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 MSL1Q68DK7 614 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 ARMC9Q7Z3E5 817 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 CROCCP2Q86T23 111 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 C12orf50Q8NA57 414 aaPredicted RBP9.62□□□□□ -0.87
PKP3-202ENST00000524646 XXYLT1Q8NBI6 393 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 SLC17A8Q8NDX2 589 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 IL31RAQ8NI17 732 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 EPS8L1Q8TE68 723 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 BBXQ8WY36 941 aaPredicted RBP9.62□□□□□ -0.87
PKP3-202ENST00000524646 IWS1Q96ST2 819 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 CBWD1Q9BRT8 395 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 TRIM31Q9BZY9 425 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 WNT8AQ9H1J5 351 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 EPB41L4BQ9H329 900 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 AGO4Q9HCK5 861 aaKnown RBP9.62□□□□□ -0.87
PKP3-202ENST00000524646 UBE2TQ9NPD8 197 aaPredicted RBP9.62□□□□□ -0.87
PKP3-202ENST00000524646 GRHL1Q9NZI5 618 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 HSPBP1Q9NZL4 362 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 ZNF70Q9UC06 446 aaPredicted RBP9.62□□□□□ -0.87
PKP3-202ENST00000524646 PCYOX1Q9UHG3 505 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 NOCTQ9UK39 431 aaKnown RBP9.62□□□□□ -0.87
PKP3-202ENST00000524646 CCPG1Q9ULG6 757 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 NOVA2Q9UNW9 492 aaKnown RBP9.62□□□□□ -0.87
PKP3-202ENST00000524646 NR2E1Q9Y466 385 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 UBIAD1Q9Y5Z9 338 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms