RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 CLCN4P51793 760 aa29.03■■■□□ 2.24
PVT1-219ENST00000523427 CLCN5P51795 746 aa29.03■■■□□ 2.24
PVT1-219ENST00000523427 INF2Q27J81 1249 aa29.03■■■□□ 2.24
PVT1-219ENST00000523427 CENPQQ7L2Z9 268 aaPredicted RBP29.03■■■□□ 2.24
PVT1-219ENST00000523427 MRPL17Q9NRX2 175 aaKnown RBP29.03■■■□□ 2.24
PVT1-219ENST00000523427 PRG3Q9Y2Y8 225 aaPredicted RBP29.03■■■□□ 2.24
PVT1-219ENST00000523427 PI15O43692 258 aa29.02■■■□□ 2.24
PVT1-219ENST00000523427 PSMA5P28066 241 aa29.02■■■□□ 2.24
PVT1-219ENST00000523427 NBL1P41271 181 aa29.02■■■□□ 2.24
PVT1-219ENST00000523427 AK2P54819 239 aa29.02■■■□□ 2.24
PVT1-219ENST00000523427 TDGQ13569 410 aa29.02■■■□□ 2.24
PVT1-219ENST00000523427 CWF19L1Q69YN2 538 aaKnown RBP29.02■■■□□ 2.24
PVT1-219ENST00000523427 PRPF31Q8WWY3 499 aaKnown RBP29.02■■■□□ 2.24
PVT1-219ENST00000523427 SLC7A3Q8WY07 619 aa29.02■■■□□ 2.24
PVT1-219ENST00000523427 CEP170P1Q96L14 293 aa29.02■■■□□ 2.24
PVT1-219ENST00000523427 AIFM3Q96NN9 605 aa29.02■■■□□ 2.24
PVT1-219ENST00000523427 CPLX1O14810 134 aa29.01■■■□□ 2.23
PVT1-219ENST00000523427 SLC37A4O43826 429 aa29.01■■■□□ 2.23
PVT1-219ENST00000523427 LETM2Q2VYF4 491 aa29.01■■■□□ 2.23
PVT1-219ENST00000523427 FBXL16Q8N461 479 aa29.01■■■□□ 2.23
PVT1-219ENST00000523427 MINDY3Q9H8M7 445 aa29.01■■■□□ 2.23
PVT1-219ENST00000523427 KCNK12Q9HB15 430 aa29.01■■■□□ 2.23
PVT1-219ENST00000523427 FAM186AA6NE01 2351 aa29■■■□□ 2.23
PVT1-219ENST00000523427 STK25O00506 426 aa29■■■□□ 2.23
PVT1-219ENST00000523427 NRP1O14786 923 aa29■■■□□ 2.23
PVT1-219ENST00000523427 QARSP47897 775 aaKnown RBP29■■■□□ 2.23
PVT1-219ENST00000523427 STK3Q13188 491 aa29■■■□□ 2.23
PVT1-219ENST00000523427 NONOQ15233 471 aaKnown RBP eCLIP29■■■□□ 2.23
PVT1-219ENST00000523427 SIX5Q8N196 739 aa29■■■□□ 2.23
PVT1-219ENST00000523427 NKD2Q969F2 451 aaPredicted RBP29■■■□□ 2.23
PVT1-219ENST00000523427 DEXIO95424 95 aa28.99■■■□□ 2.23
PVT1-219ENST00000523427 URODP06132 367 aa28.99■■■□□ 2.23
PVT1-219ENST00000523427 TAS1R1Q7RTX1 841 aa28.99■■■□□ 2.23
PVT1-219ENST00000523427 MRPL10Q7Z7H8 261 aaKnown RBP28.99■■■□□ 2.23
PVT1-219ENST00000523427 PSPC1Q8WXF1 523 aaKnown RBP28.99■■■□□ 2.23
PVT1-219ENST00000523427 MBOAT7Q96N66 472 aa28.99■■■□□ 2.23
PVT1-219ENST00000523427 MAN1C1Q9NR34 630 aa28.99■■■□□ 2.23
PVT1-219ENST00000523427 KANSL3Q9P2N6 904 aa28.99■■■□□ 2.23
PVT1-219ENST00000523427 KCNJ14Q9UNX9 436 aa28.99■■■□□ 2.23
PVT1-219ENST00000523427 NARSO43776 548 aaKnown RBP28.98■■■□□ 2.23
PVT1-219ENST00000523427 GBP2P32456 591 aaPredicted RBP28.98■■■□□ 2.23
PVT1-219ENST00000523427 OR1G1P47890 313 aa28.98■■■□□ 2.23
PVT1-219ENST00000523427 LAMTOR4Q0VGL1 99 aa28.98■■■□□ 2.23
PVT1-219ENST00000523427 UBXN11Q5T124 520 aa28.98■■■□□ 2.23
PVT1-219ENST00000523427 RSAD2Q8WXG1 361 aa28.98■■■□□ 2.23
PVT1-219ENST00000523427 TMEM175Q9BSA9 504 aa28.98■■■□□ 2.23
PVT1-219ENST00000523427 WRAP73Q9P2S5 460 aaPredicted RBP28.98■■■□□ 2.23
PVT1-219ENST00000523427 MYO15AQ9UKN7 3530 aa28.97■■■□□ 2.23
PVT1-219ENST00000523427 M0R2N6 131 aa28.97■■■□□ 2.23
PVT1-219ENST00000523427 MARCH6O60337 910 aa28.97■■■□□ 2.23
PVT1-219ENST00000523427 LILRB3O75022 631 aa28.97■■■□□ 2.23
PVT1-219ENST00000523427 ITGA4P13612 1032 aa28.97■■■□□ 2.23
PVT1-219ENST00000523427 NPR3P17342 541 aa28.97■■■□□ 2.23
PVT1-219ENST00000523427 HOXA11P31270 313 aaPredicted RBP28.97■■■□□ 2.23
PVT1-219ENST00000523427 TOB2Q14106 344 aaPredicted RBP28.97■■■□□ 2.23
PVT1-219ENST00000523427 MOXD1Q6UVY6 613 aa28.97■■■□□ 2.23
PVT1-219ENST00000523427 SRGAP1Q7Z6B7 1085 aa28.97■■■□□ 2.23
PVT1-219ENST00000523427 RNF149Q8NC42 400 aa28.97■■■□□ 2.23
PVT1-219ENST00000523427 DUSP12Q9UNI6 340 aa28.97■■■□□ 2.23
PVT1-219ENST00000523427 CNTNAP2Q9UHC6 1331 aa28.96■■■□□ 2.23
PVT1-219ENST00000523427 CCDC195A0A1B0GUA6 201 aa28.96■■■□□ 2.23
PVT1-219ENST00000523427 CFHP08603 1231 aa28.96■■■□□ 2.23
PVT1-219ENST00000523427 SPATA31D3P0C874 917 aa28.96■■■□□ 2.23
PVT1-219ENST00000523427 AOC1P19801 751 aa28.96■■■□□ 2.23
PVT1-219ENST00000523427 EVCP57679 992 aa28.96■■■□□ 2.23
PVT1-219ENST00000523427 NPY5RQ15761 445 aa28.96■■■□□ 2.23
PVT1-219ENST00000523427 SPATA31D4Q6ZUB0 917 aa28.96■■■□□ 2.23
PVT1-219ENST00000523427 KRT25Q7Z3Z0 450 aa28.96■■■□□ 2.23
PVT1-219ENST00000523427 APOL6Q9BWW8 343 aa28.96■■■□□ 2.23
PVT1-219ENST00000523427 STK39Q9UEW8 545 aa28.96■■■□□ 2.23
PVT1-219ENST00000523427 VAV3Q9UKW4 847 aa28.96■■■□□ 2.23
PVT1-219ENST00000523427 DKC1O60832 514 aaKnown RBP eCLIP28.95■■■□□ 2.228e-7■■■■■ 28.2
PVT1-219ENST00000523427 DTNBO60941 627 aa28.95■■■□□ 2.22
PVT1-219ENST00000523427 SOD2P04179 222 aa28.95■■■□□ 2.22
PVT1-219ENST00000523427 C15orf39Q6ZRI6 1047 aa28.95■■■□□ 2.22
PVT1-219ENST00000523427 RUFY3Q7L099 469 aa28.95■■■□□ 2.22
PVT1-219ENST00000523427 ADSSL1Q8N142 457 aa28.95■■■□□ 2.22
PVT1-219ENST00000523427 DAGLBQ8NCG7 672 aa28.95■■■□□ 2.22
PVT1-219ENST00000523427 RPS6KC1Q96S38 1066 aa28.95■■■□□ 2.22
PVT1-219ENST00000523427 GAD1Q99259 594 aa28.95■■■□□ 2.22
PVT1-219ENST00000523427 RNF39Q9H2S5 420 aa28.95■■■□□ 2.22
PVT1-219ENST00000523427 DHX33Q9H6R0 707 aaKnown RBP28.95■■■□□ 2.22
PVT1-219ENST00000523427 MARCH5Q9NX47 278 aa28.95■■■□□ 2.22
PVT1-219ENST00000523427 RGL1Q9NZL6 768 aa28.95■■■□□ 2.22
PVT1-219ENST00000523427 CCDC194A0A1B0GVG4 234 aa28.94■■■□□ 2.22
PVT1-219ENST00000523427 TEX28O15482 410 aa28.94■■■□□ 2.22
PVT1-219ENST00000523427 N4BP1O75113 896 aaKnown RBP28.94■■■□□ 2.22
PVT1-219ENST00000523427 RFPL2O75678 378 aa28.94■■■□□ 2.22
PVT1-219ENST00000523427 ERLIN2O94905 339 aa28.94■■■□□ 2.22
PVT1-219ENST00000523427 P4HBP07237 508 aaKnown RBP28.94■■■□□ 2.22
PVT1-219ENST00000523427 ADH1AP07327 375 aa28.94■■■□□ 2.22
PVT1-219ENST00000523427 RFX1P22670 979 aa28.94■■■□□ 2.22
PVT1-219ENST00000523427 PPP2R5CQ13362 524 aa28.94■■■□□ 2.22
PVT1-219ENST00000523427 ANGPT1Q15389 498 aa28.94■■■□□ 2.22
PVT1-219ENST00000523427 XKR9Q5GH70 373 aa28.94■■■□□ 2.22
PVT1-219ENST00000523427 SMG8Q8ND04 991 aaKnown RBP28.94■■■□□ 2.22
PVT1-219ENST00000523427 HERC2P3Q9BVR0 1158 aa28.94■■■□□ 2.22
PVT1-219ENST00000523427 EIF2AQ9BY44 585 aaKnown RBP28.94■■■□□ 2.22
PVT1-219ENST00000523427 HES2Q9Y543 173 aa28.94■■■□□ 2.22
PVT1-219ENST00000523427 F8W810 466 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms