RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 URGCPQ8TCY9 931 aa25.49■■□□□ 1.67
PVT1-218ENST00000523328 PCDHA4Q9UN74 947 aa25.49■■□□□ 1.67
PVT1-218ENST00000523328 DOCK8Q8NF50 2099 aa25.49■■□□□ 1.67
PVT1-218ENST00000523328 SPDYE4A6NLX3 237 aa25.48■■□□□ 1.67
PVT1-218ENST00000523328 PDIA3P30101 505 aaKnown RBP25.48■■□□□ 1.67
PVT1-218ENST00000523328 EVCP57679 992 aa25.48■■□□□ 1.67
PVT1-218ENST00000523328 PSMC5P62195 406 aa25.48■■□□□ 1.67
PVT1-218ENST00000523328 CCT2P78371 535 aaKnown RBP25.48■■□□□ 1.67
PVT1-218ENST00000523328 CCDC105Q8IYK2 499 aa25.48■■□□□ 1.67
PVT1-218ENST00000523328 JPH2Q9BR39 696 aaPredicted RBP25.48■■□□□ 1.67
PVT1-218ENST00000523328 TMEM175Q9BSA9 504 aa25.48■■□□□ 1.67
PVT1-218ENST00000523328 RSAD1Q9HA92 442 aa25.48■■□□□ 1.67
PVT1-218ENST00000523328 COL4A3BPQ9Y5P4 624 aa25.48■■□□□ 1.67
PVT1-218ENST00000523328 N4BP1O75113 896 aaKnown RBP25.47■■□□□ 1.67
PVT1-218ENST00000523328 ALDH2P05091 517 aa25.47■■□□□ 1.67
PVT1-218ENST00000523328 HOXA11P31270 313 aaPredicted RBP25.47■■□□□ 1.67
PVT1-218ENST00000523328 UBXN11Q5T124 520 aa25.47■■□□□ 1.67
PVT1-218ENST00000523328 MOXD1Q6UVY6 613 aa25.47■■□□□ 1.67
PVT1-218ENST00000523328 MINDY3Q9H8M7 445 aa25.47■■□□□ 1.67
PVT1-218ENST00000523328 MRPL17Q9NRX2 175 aaKnown RBP25.47■■□□□ 1.67
PVT1-218ENST00000523328 KANSL3Q9P2N6 904 aa25.47■■□□□ 1.67
PVT1-218ENST00000523328 FAN1Q9Y2M0 1017 aa25.47■■□□□ 1.67
PVT1-218ENST00000523328 CNTNAP2Q9UHC6 1331 aa25.46■■□□□ 1.67
PVT1-218ENST00000523328 EML1O00423 815 aa25.46■■□□□ 1.67
PVT1-218ENST00000523328 NRP1O14786 923 aa25.46■■□□□ 1.67
PVT1-218ENST00000523328 NPEPPSP55786 919 aa25.46■■□□□ 1.67
PVT1-218ENST00000523328 NPY5RQ15761 445 aa25.46■■□□□ 1.67
PVT1-218ENST00000523328 SIX5Q8N196 739 aa25.46■■□□□ 1.67
PVT1-218ENST00000523328 ZNF579Q8NAF0 562 aaKnown RBP25.46■■□□□ 1.67
PVT1-218ENST00000523328 CMASQ8NFW8 434 aaPredicted RBP25.46■■□□□ 1.67
PVT1-218ENST00000523328 RTP3Q9BQQ7 232 aa25.46■■□□□ 1.67
PVT1-218ENST00000523328 MARCH5Q9NX47 278 aa25.46■■□□□ 1.67
PVT1-218ENST00000523328 IGSF9Q9P2J2 1179 aa25.46■■□□□ 1.67
PVT1-218ENST00000523328 POMCP01189 267 aa25.45■■□□□ 1.66
PVT1-218ENST00000523328 SOD2P04179 222 aa25.45■■□□□ 1.66
PVT1-218ENST00000523328 ANGPT1Q15389 498 aa25.45■■□□□ 1.66
PVT1-218ENST00000523328 SRGAP1Q7Z6B7 1085 aa25.45■■□□□ 1.66
PVT1-218ENST00000523328 BLIDQ8IZY5 108 aa25.45■■□□□ 1.66
PVT1-218ENST00000523328 ADSSL1Q8N142 457 aa25.45■■□□□ 1.66
PVT1-218ENST00000523328 FAM193BQ96PV7 902 aaPredicted RBP25.45■■□□□ 1.66
PVT1-218ENST00000523328 DHX33Q9H6R0 707 aaKnown RBP25.45■■□□□ 1.66
PVT1-218ENST00000523328 MAN1C1Q9NR34 630 aa25.45■■□□□ 1.66
PVT1-218ENST00000523328 FBXL21Q9UKT6 434 aa25.45■■□□□ 1.66
PVT1-218ENST00000523328 TDRD15B5MCY1 1934 aaKnown RBP25.45■■□□□ 1.66
PVT1-218ENST00000523328 MTCL1Q9Y4B5 1905 aaKnown RBP25.45■■□□□ 1.66
PVT1-218ENST00000523328 C2CD2LO14523 706 aa25.44■■□□□ 1.66
PVT1-218ENST00000523328 NARSO43776 548 aaKnown RBP25.44■■□□□ 1.66
PVT1-218ENST00000523328 EFEMP2O95967 443 aa25.44■■□□□ 1.66
PVT1-218ENST00000523328 TAS1R1Q7RTX1 841 aa25.44■■□□□ 1.66
PVT1-218ENST00000523328 RNF168Q8IYW5 571 aaPredicted RBP25.44■■□□□ 1.66
PVT1-218ENST00000523328 DTWD2Q8NBA8 298 aa25.44■■□□□ 1.66
PVT1-218ENST00000523328 DAGLBQ8NCG7 672 aa25.44■■□□□ 1.66
PVT1-218ENST00000523328 PRPF31Q8WWY3 499 aaKnown RBP25.44■■□□□ 1.66
PVT1-218ENST00000523328 SLC7A3Q8WY07 619 aa25.44■■□□□ 1.66
PVT1-218ENST00000523328 RPS6KC1Q96S38 1066 aa25.44■■□□□ 1.66
PVT1-218ENST00000523328 HERC2P3Q9BVR0 1158 aa25.44■■□□□ 1.66
PVT1-218ENST00000523328 WRAP73Q9P2S5 460 aaPredicted RBP25.44■■□□□ 1.66
PVT1-218ENST00000523328 DDX25Q9UHL0 483 aaKnown RBP25.44■■□□□ 1.66
PVT1-218ENST00000523328 VAV3Q9UKW4 847 aa25.44■■□□□ 1.66
PVT1-218ENST00000523328 ARID2Q68CP9 1835 aa25.44■■□□□ 1.66
PVT1-218ENST00000523328 SLC37A4O43826 429 aa25.43■■□□□ 1.66
PVT1-218ENST00000523328 URODP06132 367 aa25.43■■□□□ 1.66
PVT1-218ENST00000523328 NCLP19338 710 aaKnown RBP25.43■■□□□ 1.66
PVT1-218ENST00000523328 QARSP47897 775 aaKnown RBP25.43■■□□□ 1.66
PVT1-218ENST00000523328 PPP2R5CQ13362 524 aa25.43■■□□□ 1.66
PVT1-218ENST00000523328 TRIM22Q8IYM9 498 aa25.43■■□□□ 1.66
PVT1-218ENST00000523328 TMEM143Q96AN5 459 aa25.43■■□□□ 1.66
PVT1-218ENST00000523328 RHOBTB2Q9BYZ6 727 aa25.43■■□□□ 1.66
PVT1-218ENST00000523328 WDR6Q9NNW5 1121 aaKnown RBP25.43■■□□□ 1.66
PVT1-218ENST00000523328 EP300Q09472 2414 aaPredicted RBP25.43■■□□□ 1.66
PVT1-218ENST00000523328 TEX28O15482 410 aa25.42■■□□□ 1.66
PVT1-218ENST00000523328 SRGAP2CP0DJJ0 459 aa25.42■■□□□ 1.66
PVT1-218ENST00000523328 AK2P54819 239 aa25.42■■□□□ 1.66
PVT1-218ENST00000523328 SSRP1Q08945 709 aaKnown RBP25.42■■□□□ 1.66
PVT1-218ENST00000523328 NONOQ15233 471 aaKnown RBP eCLIP25.42■■□□□ 1.66
PVT1-218ENST00000523328 COLGALT2Q8IYK4 626 aa25.42■■□□□ 1.66
PVT1-218ENST00000523328 SMG8Q8ND04 991 aaKnown RBP25.42■■□□□ 1.66
PVT1-218ENST00000523328 PSPC1Q8WXF1 523 aaKnown RBP25.42■■□□□ 1.66
PVT1-218ENST00000523328 RSAD2Q8WXG1 361 aa25.42■■□□□ 1.66
PVT1-218ENST00000523328 CEP170P1Q96L14 293 aa25.42■■□□□ 1.66
PVT1-218ENST00000523328 WNT16Q9UBV4 365 aa25.42■■□□□ 1.66
PVT1-218ENST00000523328 PRG3Q9Y2Y8 225 aaPredicted RBP25.42■■□□□ 1.66
PVT1-218ENST00000523328 PPME1Q9Y570 386 aa25.42■■□□□ 1.66
PVT1-218ENST00000523328 ZNF292O60281 2723 aa25.42■■□□□ 1.66
PVT1-218ENST00000523328 WDR87Q6ZQQ6 2873 aa25.41■■□□□ 1.66
PVT1-218ENST00000523328 CCDC195A0A1B0GUA6 201 aa25.41■■□□□ 1.66
PVT1-218ENST00000523328 KRBA1A5PL33 1030 aa25.41■■□□□ 1.66
PVT1-218ENST00000523328 INPPL1O15357 1258 aa25.41■■□□□ 1.66
PVT1-218ENST00000523328 ADH1AP07327 375 aa25.41■■□□□ 1.66
PVT1-218ENST00000523328 LAMTOR4Q0VGL1 99 aa25.41■■□□□ 1.66
PVT1-218ENST00000523328 TOB2Q14106 344 aaPredicted RBP25.41■■□□□ 1.66
PVT1-218ENST00000523328 INF2Q27J81 1249 aa25.41■■□□□ 1.66
PVT1-218ENST00000523328 KIAA0319Q5VV43 1072 aa25.41■■□□□ 1.66
PVT1-218ENST00000523328 CYP26C1Q6V0L0 522 aa25.41■■□□□ 1.66
PVT1-218ENST00000523328 EXOC8Q8IYI6 725 aa25.41■■□□□ 1.66
PVT1-218ENST00000523328 KCNMB3Q9NPA1 279 aa25.41■■□□□ 1.66
PVT1-218ENST00000523328 SSX2IPQ9Y2D8 614 aa25.41■■□□□ 1.66
PVT1-218ENST00000523328 CLUHO75153 1309 aa25.4■■□□□ 1.66
PVT1-218ENST00000523328 DEXIO95424 95 aa25.4■■□□□ 1.66
PVT1-218ENST00000523328 P4HBP07237 508 aaKnown RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms