RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 CENPPQ6IPU0 288 aa24.21■■□□□ 1.47
PTP4A3-204ENST00000521578 ZNF507Q8TCN5 953 aa24.21■■□□□ 1.47
PTP4A3-204ENST00000521578 MAP7D2Q96T17 732 aa24.21■■□□□ 1.47
PTP4A3-204ENST00000521578 PPP1R16BQ96T49 567 aa24.21■■□□□ 1.47
PTP4A3-204ENST00000521578 SUCLA2Q9P2R7 463 aaPredicted RBP24.21■■□□□ 1.47
PTP4A3-204ENST00000521578 CLTBP09497 229 aa24.2■■□□□ 1.46
PTP4A3-204ENST00000521578 CASP14P31944 242 aa24.2■■□□□ 1.46
PTP4A3-204ENST00000521578 THPOP40225 353 aa24.2■■□□□ 1.46
PTP4A3-204ENST00000521578 SYCP1Q15431 976 aa24.2■■□□□ 1.46
PTP4A3-204ENST00000521578 FOXR2Q6PJQ5 311 aa24.2■■□□□ 1.46
PTP4A3-204ENST00000521578 FAM114A1Q8IWE2 563 aa24.2■■□□□ 1.46
PTP4A3-204ENST00000521578 GUF1Q8N442 669 aaKnown RBP24.2■■□□□ 1.46
PTP4A3-204ENST00000521578 TCP11Q8WWU5 503 aa24.2■■□□□ 1.46
PTP4A3-204ENST00000521578 DDX12PQ92771 950 aa24.2■■□□□ 1.46
PTP4A3-204ENST00000521578 POLR3FQ9H1D9 316 aaPredicted RBP24.2■■□□□ 1.46
PTP4A3-204ENST00000521578 TMEM39AQ9NV64 488 aa24.2■■□□□ 1.46
PTP4A3-204ENST00000521578 KCND2Q9NZV8 630 aa24.2■■□□□ 1.46
PTP4A3-204ENST00000521578 GAS2O43903 313 aaKnown RBP24.19■■□□□ 1.46
PTP4A3-204ENST00000521578 HIP1RO75146 1068 aa24.19■■□□□ 1.46
PTP4A3-204ENST00000521578 GUCY2CP25092 1073 aa24.19■■□□□ 1.46
PTP4A3-204ENST00000521578 IER5Q5VY09 327 aa24.19■■□□□ 1.46
PTP4A3-204ENST00000521578 TRIM65Q6PJ69 517 aa24.19■■□□□ 1.46
PTP4A3-204ENST00000521578 RHPN2Q8IUC4 686 aa24.19■■□□□ 1.46
PTP4A3-204ENST00000521578 PRPF31Q8WWY3 499 aaKnown RBP24.19■■□□□ 1.46
PTP4A3-204ENST00000521578 ZNF668Q96K58 619 aaPredicted RBP24.19■■□□□ 1.46
PTP4A3-204ENST00000521578 REEP2Q9BRK0 252 aa24.19■■□□□ 1.46
PTP4A3-204ENST00000521578 PRDM5Q9NQX1 630 aaPredicted RBP24.19■■□□□ 1.46
PTP4A3-204ENST00000521578 SFI1A8K8P3 1242 aa24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 RSPH10B2B2RC85 870 aa24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 CTSHP09668 335 aa24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 RSPH10BP0C881 870 aa24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 FXR1P51114 621 aaKnown RBP eCLIP24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 UBXN1Q04323 297 aa24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 TRIM71Q2Q1W2 868 aaKnown RBP24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 KSR1Q8IVT5 923 aa24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 CPLX3Q8WVH0 158 aa24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 PSPC1Q8WXF1 523 aaKnown RBP24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 DNAJC19Q96DA6 116 aa24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 SEMA6BQ9H3T3 888 aa24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 SLC39A2Q9NP94 309 aa24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 PHLPP2Q6ZVD8 1323 aa24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 GIT2Q14161 759 aa24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 TOGARAM2Q6ZUX3 1019 aa24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 RSPH3Q86UC2 560 aa24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 C7orf61Q8IZ16 206 aa24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 DAW1Q8N136 415 aa24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 DPF3Q92784 378 aa24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 TBX21Q9UL17 535 aa24.18■■□□□ 1.46
PTP4A3-204ENST00000521578 CKBP12277 381 aa24.17■■□□□ 1.46
PTP4A3-204ENST00000521578 ARL2P36404 184 aa24.17■■□□□ 1.46
PTP4A3-204ENST00000521578 MAPK7Q13164 816 aa24.17■■□□□ 1.46
PTP4A3-204ENST00000521578 SYT10Q6XYQ8 523 aa24.17■■□□□ 1.46
PTP4A3-204ENST00000521578 NME8Q8N427 588 aa24.17■■□□□ 1.46
PTP4A3-204ENST00000521578 ASAP3Q8TDY4 903 aa24.17■■□□□ 1.46
PTP4A3-204ENST00000521578 TSC1Q92574 1164 aa24.17■■□□□ 1.46
PTP4A3-204ENST00000521578 HPS3Q969F9 1004 aa24.17■■□□□ 1.46
PTP4A3-204ENST00000521578 NOC4LQ9BVI4 516 aaKnown RBP24.17■■□□□ 1.46
PTP4A3-204ENST00000521578 PPP1R12CQ9BZL4 782 aa24.17■■□□□ 1.46
PTP4A3-204ENST00000521578 HIPK3Q9H422 1215 aa24.17■■□□□ 1.46
PTP4A3-204ENST00000521578 ZHX3Q9H4I2 956 aa24.17■■□□□ 1.46
PTP4A3-204ENST00000521578 L2HGDHQ9H9P8 463 aa24.17■■□□□ 1.46
PTP4A3-204ENST00000521578 PCDH10Q9P2E7 1040 aa24.17■■□□□ 1.46
PTP4A3-204ENST00000521578 GINS2Q9Y248 185 aa24.17■■□□□ 1.46
PTP4A3-204ENST00000521578 RBAK-RBAKDNI3L0D1 243 aa24.16■■□□□ 1.46
PTP4A3-204ENST00000521578 EVI5O60447 810 aa24.16■■□□□ 1.46
PTP4A3-204ENST00000521578 LAMTOR4Q0VGL1 99 aa24.16■■□□□ 1.46
PTP4A3-204ENST00000521578 KIZQ2M2Z5 673 aa24.16■■□□□ 1.46
PTP4A3-204ENST00000521578 ZNF618Q5T7W0 954 aa24.16■■□□□ 1.46
PTP4A3-204ENST00000521578 CREBRFQ8IUR6 639 aa24.16■■□□□ 1.46
PTP4A3-204ENST00000521578 CAGE1Q8TC20 777 aa24.16■■□□□ 1.46
PTP4A3-204ENST00000521578 KIFAP3Q92845 792 aa24.16■■□□□ 1.46
PTP4A3-204ENST00000521578 TIPINQ9BVW5 301 aa24.16■■□□□ 1.46
PTP4A3-204ENST00000521578 COL4A3BPQ9Y5P4 624 aa24.16■■□□□ 1.46
PTP4A3-204ENST00000521578 UMODL1Q5DID0 1318 aa24.16■■□□□ 1.46
PTP4A3-204ENST00000521578 GLRA2P23416 452 aa24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 NLRP11P59045 1033 aaKnown RBP24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 MRPS6P82932 125 aaKnown RBP24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 RBM10P98175 930 aaKnown RBP24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 BFSP2Q13515 415 aa24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 MTERF4Q7Z6M4 381 aaKnown RBP24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 RPAINQ86UA6 219 aa24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 CCDC155Q8N6L0 562 aa24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 BSNDQ8WZ55 320 aa24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 DRC1Q96MC2 740 aa24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 NLRP4Q96MN2 994 aa24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 TUBGCP2Q9BSJ2 902 aa24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 MYH11P35749 1972 aa24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 TRIM43BA6NCK2 446 aa24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 SOWAHDA6NJG2 315 aa24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 SRGAP2CP0DJJ0 459 aa24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 IDEP14735 1019 aa24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 TMTC1Q8IUR5 882 aa24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 TRIM43Q96BQ3 446 aaPredicted RBP24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 CNOT6LQ96LI5 555 aaKnown RBP24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 SCLT1Q96NL6 688 aa24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 ABHD10Q9NUJ1 306 aa24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 ODF2LQ9ULJ1 636 aa24.15■■□□□ 1.46
PTP4A3-204ENST00000521578 RRP9O43818 475 aaKnown RBP24.14■■□□□ 1.45
PTP4A3-204ENST00000521578 TBCAO75347 108 aaKnown RBP24.14■■□□□ 1.45
PTP4A3-204ENST00000521578 FAM13AO94988 1023 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms