RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 HIST1H2AHQ96KK5 128 aa6.12□□□□□ -1.43
CLK4-207ENST00000520909 HIST1H2AJQ99878 128 aa6.12□□□□□ -1.43
CLK4-207ENST00000520909 PDCD2LQ9BRP1 358 aa6.12□□□□□ -1.43
CLK4-207ENST00000520909 NOL10Q9BSC4 688 aaKnown RBP6.12□□□□□ -1.43
CLK4-207ENST00000520909 ADARB2Q9NS39 739 aaKnown RBP6.12□□□□□ -1.43
CLK4-207ENST00000520909 ING3Q9NXR8 418 aa6.12□□□□□ -1.43
CLK4-207ENST00000520909 FANCD2Q9BXW9 1451 aa6.11□□□□□ -1.43
CLK4-207ENST00000520909 PDS5BQ9NTI5 1447 aa6.11□□□□□ -1.43
CLK4-207ENST00000520909 KIAA0355O15063 1070 aa6.11□□□□□ -1.43
CLK4-207ENST00000520909 ASLP04424 464 aa6.11□□□□□ -1.43
CLK4-207ENST00000520909 SLC9A1P19634 815 aa6.11□□□□□ -1.43
CLK4-207ENST00000520909 CD38P28907 300 aa6.11□□□□□ -1.43
CLK4-207ENST00000520909 RBM25P49756 843 aaKnown RBP6.11□□□□□ -1.43
CLK4-207ENST00000520909 USP14P54578 494 aa6.11□□□□□ -1.43
CLK4-207ENST00000520909 C21orf58P58505 322 aa6.11□□□□□ -1.43
CLK4-207ENST00000520909 RBL2Q08999 1139 aa6.11□□□□□ -1.43
CLK4-207ENST00000520909 BEND2Q8NDZ0 799 aa6.11□□□□□ -1.43
CLK4-207ENST00000520909 SUPT20HQ8NEM7 779 aa6.11□□□□□ -1.43
CLK4-207ENST00000520909 OR5M3Q8NGP4 307 aa6.11□□□□□ -1.43
CLK4-207ENST00000520909 SLC46A2Q9BY10 475 aa6.11□□□□□ -1.43
CLK4-207ENST00000520909 ZNF768Q9H5H4 540 aaKnown RBP6.11□□□□□ -1.43
CLK4-207ENST00000520909 HDAC5Q9UQL6 1122 aa6.11□□□□□ -1.43
CLK4-207ENST00000520909 LAMC3Q9Y6N6 1575 aa6.11□□□□□ -1.43
CLK4-207ENST00000520909 A0A0A6YYK5 440 aaPredicted RBP6.1□□□□□ -1.43
CLK4-207ENST00000520909 CENPVL1A0A0U1RR11 272 aa6.1□□□□□ -1.43
CLK4-207ENST00000520909 OPA1O60313 960 aa6.1□□□□□ -1.43
CLK4-207ENST00000520909 OPHN1O60890 802 aa6.1□□□□□ -1.43
CLK4-207ENST00000520909 DNAJC6O75061 913 aa6.1□□□□□ -1.43
CLK4-207ENST00000520909 ALDH1A2O94788 518 aa6.1□□□□□ -1.43
CLK4-207ENST00000520909 RAPGEF3O95398 923 aa6.1□□□□□ -1.43
CLK4-207ENST00000520909 GAAP10253 952 aa6.1□□□□□ -1.43
CLK4-207ENST00000520909 VPS72Q15906 364 aa6.1□□□□□ -1.43
CLK4-207ENST00000520909 KIAA1841Q6NSI8 718 aa6.1□□□□□ -1.43
CLK4-207ENST00000520909 NTN5Q8WTR8 489 aaPredicted RBP6.1□□□□□ -1.43
CLK4-207ENST00000520909 MKL1Q969V6 931 aa6.1□□□□□ -1.43
CLK4-207ENST00000520909 ARMC5Q96C12 935 aa6.1□□□□□ -1.43
CLK4-207ENST00000520909 SOX7Q9BT81 388 aa6.1□□□□□ -1.43
CLK4-207ENST00000520909 NDC1Q9BTX1 674 aa6.1□□□□□ -1.43
CLK4-207ENST00000520909 MYL10Q9BUA6 226 aa6.1□□□□□ -1.43
CLK4-207ENST00000520909 SYNPO2LQ9H987 977 aa6.1□□□□□ -1.43
CLK4-207ENST00000520909 B4GALT6Q9UBX8 382 aa6.1□□□□□ -1.43
CLK4-207ENST00000520909 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.1□□□□□ -1.43
CLK4-207ENST00000520909 PTCH2Q9Y6C5 1203 aa6.1□□□□□ -1.43
CLK4-207ENST00000520909 AHRRA9YTQ3 701 aa6.09□□□□□ -1.43
CLK4-207ENST00000520909 ZFP36P26651 326 aaKnown RBP6.09□□□□□ -1.43
CLK4-207ENST00000520909 ZEB1P37275 1124 aaPredicted RBP6.09□□□□□ -1.43
CLK4-207ENST00000520909 FNDC3BQ53EP0 1204 aaKnown RBP6.09□□□□□ -1.43
CLK4-207ENST00000520909 C2orf27AQ580R0 203 aa6.09□□□□□ -1.43
CLK4-207ENST00000520909 LRCH2Q5VUJ6 765 aa6.09□□□□□ -1.43
CLK4-207ENST00000520909 UNQ6494/PRO21346Q6UXR6 183 aa6.09□□□□□ -1.43
CLK4-207ENST00000520909 UBE2R2Q712K3 238 aaPredicted RBP6.09□□□□□ -1.43
CLK4-207ENST00000520909 FAM9AQ8IZU1 332 aaPredicted RBP6.09□□□□□ -1.43
CLK4-207ENST00000520909 LCORLQ8N3X6 602 aa6.09□□□□□ -1.43
CLK4-207ENST00000520909 OR52N2Q8NGI0 321 aa6.09□□□□□ -1.43
CLK4-207ENST00000520909 BBC3Q96PG8 261 aaPredicted RBP6.09□□□□□ -1.43
CLK4-207ENST00000520909 DCLRE1CQ96SD1 692 aaKnown RBP6.09□□□□□ -1.43
CLK4-207ENST00000520909 ELF4Q99607 663 aaPredicted RBP6.09□□□□□ -1.43
CLK4-207ENST00000520909 ENKD1Q9H0I2 346 aa6.09□□□□□ -1.43
CLK4-207ENST00000520909 POFUT1Q9H488 388 aa6.09□□□□□ -1.43
CLK4-207ENST00000520909 SERHL2Q9H4I8 314 aa6.09□□□□□ -1.43
CLK4-207ENST00000520909 RNASET2O00584 256 aaKnown RBP6.08□□□□□ -1.44
CLK4-207ENST00000520909 FLT3P36888 993 aa6.08□□□□□ -1.44
CLK4-207ENST00000520909 CASRP41180 1078 aa6.08□□□□□ -1.44
CLK4-207ENST00000520909 MRPL49Q13405 166 aaKnown RBP6.08□□□□□ -1.44
CLK4-207ENST00000520909 PIK3R6Q5UE93 754 aa6.08□□□□□ -1.44
CLK4-207ENST00000520909 ZKSCAN2Q63HK3 967 aa6.08□□□□□ -1.44
CLK4-207ENST00000520909 ZZZ3Q8IYH5 903 aa6.08□□□□□ -1.44
CLK4-207ENST00000520909 UNC5BQ8IZJ1 945 aa6.08□□□□□ -1.44
CLK4-207ENST00000520909 CLUHP3Q96NS8 147 aa6.08□□□□□ -1.44
CLK4-207ENST00000520909 WDR11Q9BZH6 1224 aa6.08□□□□□ -1.44
CLK4-207ENST00000520909 TRPM5Q9NZQ8 1165 aa6.08□□□□□ -1.44
CLK4-207ENST00000520909 ANKFY1Q9P2R3 1169 aa6.08□□□□□ -1.44
CLK4-207ENST00000520909 SPO11Q9Y5K1 396 aa6.08□□□□□ -1.44
CLK4-207ENST00000520909 CEP164Q9UPV0 1460 aa6.07□□□□□ -1.44
CLK4-207ENST00000520909 TMEM200CA6NKL6 621 aa6.07□□□□□ -1.44
CLK4-207ENST00000520909 LPXNO60711 386 aa6.07□□□□□ -1.44
CLK4-207ENST00000520909 PTTG1IPP53801 180 aa6.07□□□□□ -1.44
CLK4-207ENST00000520909 WNT3AP56704 352 aa6.07□□□□□ -1.44
CLK4-207ENST00000520909 SOGA3Q5TF21 947 aa6.07□□□□□ -1.44
CLK4-207ENST00000520909 ESRP1Q6NXG1 681 aaKnown RBP6.07□□□□□ -1.44
CLK4-207ENST00000520909 Q6YL49 198 aa6.07□□□□□ -1.44
CLK4-207ENST00000520909 RTF1Q92541 710 aaKnown RBP6.07□□□□□ -1.44
CLK4-207ENST00000520909 IL17RAQ96F46 866 aa6.07□□□□□ -1.44
CLK4-207ENST00000520909 CPEB1Q9BZB8 566 aaKnown RBP6.07□□□□□ -1.44
CLK4-207ENST00000520909 TOMM22Q9NS69 142 aa6.07□□□□□ -1.44
CLK4-207ENST00000520909 CLCA2Q9UQC9 943 aa6.07□□□□□ -1.44
CLK4-207ENST00000520909 CUX1P39880 1505 aa6.07□□□□□ -1.44
CLK4-207ENST00000520909 MYPNQ86TC9 1320 aa6.06□□□□□ -1.44
CLK4-207ENST00000520909 GAGE12BA1L429 117 aa6.06□□□□□ -1.44
CLK4-207ENST00000520909 GAGE12HA6NDE8 117 aa6.06□□□□□ -1.44
CLK4-207ENST00000520909 CFBP00751 764 aa6.06□□□□□ -1.44
CLK4-207ENST00000520909 APOBEC3AP31941 199 aaPredicted RBP6.06□□□□□ -1.44
CLK4-207ENST00000520909 AVPR1BP47901 424 aa6.06□□□□□ -1.44
CLK4-207ENST00000520909 FAM189BP81408 668 aa6.06□□□□□ -1.44
CLK4-207ENST00000520909 CD69Q07108 199 aa6.06□□□□□ -1.44
CLK4-207ENST00000520909 DOK3Q7L591 496 aa6.06□□□□□ -1.44
CLK4-207ENST00000520909 GDF7Q7Z4P5 450 aa6.06□□□□□ -1.44
CLK4-207ENST00000520909 ARHGEF19Q8IW93 802 aa6.06□□□□□ -1.44
CLK4-207ENST00000520909 LILRA3Q8N6C8 439 aaPredicted RBP6.06□□□□□ -1.44
CLK4-207ENST00000520909 PIK3C3Q8NEB9 887 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms