RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 ANKRD20A1Q5TYW2 823 aa13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 DCAF12L1Q5VU92 463 aa13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 ANKRD20A3Q5VUR7 823 aa13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 CRELD2Q6UXH1 353 aaPredicted RBP13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 STXBP4Q6ZWJ1 553 aa13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 EXOC3L1Q86VI1 746 aa13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 SLF2Q8IX21 1173 aa13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 RPUSD2Q8IZ73 545 aaKnown RBP13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 ZNF653Q96CK0 615 aa13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 FAM118BQ9BPY3 351 aa13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 GNPATO15228 680 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 CLDN3O15551 220 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 KCNQ2O43526 872 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 COG2Q14746 738 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 NFIXQ14938 502 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 MUM1Q2TAK8 710 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 RNF207Q6ZRF8 634 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 ARHGEF18Q6ZSZ5 1173 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 PRELID2Q8N945 189 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 ERP27Q96DN0 273 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 C9orf72Q96LT7 481 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 INTUQ9ULD6 942 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 AFF2P51816 1311 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 MIF4GDA9UHW6 222 aaKnown RBP13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 GH1P01241 217 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 UBXN2AP68543 259 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 ARHGAP4P98171 946 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 KRT17Q04695 432 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 MXD3Q9BW11 206 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 ZDHHC18Q9NUE0 388 aa13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 CPSF2Q9P2I0 782 aaKnown RBP13.77□□□□□ -0.21
TRAPPC9-208ENST00000520857 CICQ96RK0 1608 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 DDX3YO15523 660 aaKnown RBP13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 GAS8O95995 478 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 RARAP10276 462 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 RARGP13631 454 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 EEF2P13639 858 aaKnown RBP13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 NPEPPSP55786 919 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 QRICH1Q2TAL8 776 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 KIAA0825Q8IV33 1275 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 AGPAT1Q99943 283 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 HEMGNQ9BXL5 484 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 GLI3P10071 1580 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 RPTORQ8N122 1335 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 LRRD1A4D1F6 860 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 FAM196BA6NMK8 535 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 RASA4BC9J798 803 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 RASA4O43374 803 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 ATF2P15336 505 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 TARSP26639 723 aaKnown RBP13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 GCLMP48507 274 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 RBM5P52756 815 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 MARSP56192 900 aaKnown RBP13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 GPC5P78333 572 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 ZNF543Q08ER8 600 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 SLFN11Q7Z7L1 901 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 ATG4AQ8WYN0 398 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 TMEM237Q96Q45 408 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 ANAPC5Q9UJX4 755 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 TRAF3IP3Q9Y228 551 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 STXBP5LQ9Y2K9 1186 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 TCRBV7S2A1N4TA0A589 114 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 DDX39AO00148 427 aaKnown RBP13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 GTF2IP78347 998 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 IL9RQ01113 521 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 TSNAXIP1Q2TAA8 658 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 ZDHHC24Q6UX98 284 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 NUDCD1Q96RS6 583 aa13.76□□□□□ -0.21
TRAPPC9-208ENST00000520857 MYH3P11055 1940 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 ANKRD63C9JTQ0 380 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 PYGMP11217 842 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 COILP38432 576 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 RNASELQ05823 741 aaKnown RBP13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 TLDC1Q6P9B6 456 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 CLEC4GQ6UXB4 293 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 SPDYE1Q8NFV5 336 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 TXLNGQ9NUQ3 528 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 APEX2Q9UBZ4 518 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 ZBTB21Q9ULJ3 1066 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 TRPM3Q9HCF6 1732 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 PITPNM2Q9BZ72 1349 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 MYH1P12882 1939 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 MYH4Q9Y623 1939 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 HLA-DOAP06340 250 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 SLURP2P0DP57 97 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 TAL1P17542 331 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 ANXA13P27216 316 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 ZBTB16Q05516 673 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 TCP10Q12799 353 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 DNAJC3Q13217 504 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 FITM2Q8N6M3 262 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 CCDC127Q96BQ5 260 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 PWWP2AQ96N64 755 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 ZNF570Q96NI8 536 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 ZSWIM1Q9BR11 485 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 HAO1Q9UJM8 370 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 PFASO15067 1338 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 WDR91A4D1P6 747 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 KRT5P13647 590 aa13.75□□□□□ -0.21
TRAPPC9-208ENST00000520857 SCNN1DP51172 638 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms