RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-208	ENST00000518877	GDF7	Q7Z4P5	450 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	NME9	Q86XW9	330 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	ARHGEF19	Q8IW93	802 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	ZSWIM2	Q8NEG5	633 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	MKL1	Q969V6	931 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	ARMC5	Q96C12	935 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	DCLRE1C	Q96SD1	692 aa	Known RBP	4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	NDC1	Q9BTX1	674 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	CPEB1	Q9BZB8	566 aa	Known RBP	4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	HAPLN2	Q9GZV7	340 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	PRDM13	Q9H4Q3	707 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	AKIP1	Q9NQ31	210 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	ING3	Q9NXR8	418 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	TMEM200C	A6NKL6	621 aa		4.18	□□□□□ -1.74
PCM1-208	ENST00000518877		H7C1D1	291 aa		4.18	□□□□□ -1.74
PCM1-208	ENST00000518877		M0R2C6	588 aa		4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	GLRX3	O76003	335 aa	Known RBP	4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	NDUFA10	O95299	355 aa		4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	CYP17A1	P05093	508 aa		4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	PTH2R	P49190	550 aa		4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	ADCY2	Q08462	1091 aa		4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	MYBPC3	Q14896	1274 aa		4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	METTL24	Q5JXM2	366 aa		4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	PAPD7	Q5XG87	772 aa	Known RBP	4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	DDX53	Q86TM3	631 aa	Known RBP	4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	LILRB2	Q8N423	598 aa		4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	OR52N2	Q8NGI0	321 aa		4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	CLUHP3	Q96NS8	147 aa		4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	PDCD2L	Q9BRP1	358 aa		4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	NOL10	Q9BSC4	688 aa	Known RBP	4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	SPATA5L1	Q9BVQ7	753 aa		4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	MTG2	Q9H4K7	406 aa		4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	NCOA5	Q9HCD5	579 aa	Known RBP	4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
PCM1-208	ENST00000518877	PLD2	O14939	933 aa		4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	ALDH1A2	O94788	518 aa		4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	RAPGEF3	O95398	923 aa		4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	C1R	P00736	705 aa		4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	CFB	P00751	764 aa		4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	HKR1	P10072	659 aa		4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	CASR	P41180	1078 aa		4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	RANGAP1	P46060	587 aa	Predicted RBP	4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	GUCY1B3	Q02153	619 aa		4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	TIGD7	Q6NT04	549 aa	Predicted RBP	4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	C7orf31	Q8N865	590 aa		4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	KIAA1958	Q8N8K9	716 aa		4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	BOLL	Q8N9W6	283 aa	Known RBP	4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	HIST1H2AH	Q96KK5	128 aa		4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	COQ10A	Q96MF6	247 aa		4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	C8orf37	Q96NL8	207 aa		4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	SRPK1	Q96SB4	655 aa	Known RBP	4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	HIST1H2AJ	Q99878	128 aa		4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	OSBPL6	Q9BZF3	934 aa		4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	SPON1	Q9HCB6	807 aa		4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	SYBU	Q9NX95	663 aa		4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	TES	Q9UGI8	421 aa	Known RBP	4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	PTCH2	Q9Y6C5	1203 aa		4.17	□□□□□ -1.74
PCM1-208	ENST00000518877	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.17	□□□□□ -1.74
PCM1-208	ENST00000518877		A0A0A6YYJ9	748 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	GAGE12B	A1L429	117 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	GAGE12H	A6NDE8	117 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	UNC119B	A6NIH7	251 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	GAA	P10253	952 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	TYRP1	P17643	537 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	ITGB6	P18564	788 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	PTX3	P26022	381 aa	Predicted RBP	4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	PLA2G5	P39877	138 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	SEC24C	P53992	1094 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	ELL	P55199	621 aa	Predicted RBP	4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	EPHA7	Q15375	998 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	PRR16	Q569H4	304 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	C2orf27A	Q580R0	203 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	XYLT1	Q86Y38	959 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	PLXDC1	Q8IUK5	500 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	PHYKPL	Q8IUZ5	450 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	CHST14	Q8NCH0	376 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	CPEB3	Q8NE35	698 aa	Known RBP	4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	IL17RA	Q96F46	866 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	LSM14B	Q9BX40	385 aa	Known RBP	4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	PITHD1	Q9GZP4	211 aa	Predicted RBP	4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	CABP5	Q9NP86	173 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	SAMD15	Q9P1V8	674 aa		4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	SETD1B	Q9UPS6	1966 aa	Known RBP	4.16	□□□□□ -1.74
PCM1-208	ENST00000518877	PTPDC1	A2A3K4	754 aa		4.15	□□□□□ -1.75
PCM1-208	ENST00000518877	PRR5-ARHGAP8	B1AHC4	643 aa		4.15	□□□□□ -1.75
PCM1-208	ENST00000518877		B4E1Z4	1266 aa		4.15	□□□□□ -1.75
PCM1-208	ENST00000518877	LEFTY2	O00292	366 aa		4.15	□□□□□ -1.75
PCM1-208	ENST00000518877	OPHN1	O60890	802 aa		4.15	□□□□□ -1.75
PCM1-208	ENST00000518877	PRPF6	O94906	941 aa	Known RBP	4.15	□□□□□ -1.75
PCM1-208	ENST00000518877	HSP90B1	P14625	803 aa	Known RBP	4.15	□□□□□ -1.75
PCM1-208	ENST00000518877	WNT3A	P56704	352 aa		4.15	□□□□□ -1.75
PCM1-208	ENST00000518877	RNASE9	P60153	205 aa	Known RBP	4.15	□□□□□ -1.75
PCM1-208	ENST00000518877	ADCY1	Q08828	1119 aa		4.15	□□□□□ -1.75
PCM1-208	ENST00000518877	FOXI1	Q12951	378 aa		4.15	□□□□□ -1.75
PCM1-208	ENST00000518877	BEAN1	Q3B7T3	259 aa		4.15	□□□□□ -1.75
PCM1-208	ENST00000518877	DOK3	Q7L591	496 aa		4.15	□□□□□ -1.75
PCM1-208	ENST00000518877	KANSL1	Q7Z3B3	1105 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms