RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 SEPT1Q8WYJ6 367 aa28.84■■■□□ 2.21
COL13A1-210ENST00000517713 TMEM143Q96AN5 459 aa28.84■■■□□ 2.21
COL13A1-210ENST00000517713 NRBP2Q9NSY0 501 aa28.84■■■□□ 2.21
COL13A1-210ENST00000517713 NAGPAQ9UK23 515 aa28.84■■■□□ 2.21
COL13A1-210ENST00000517713 CLEC11AQ9Y240 323 aa28.84■■■□□ 2.21
COL13A1-210ENST00000517713 STAT5BP51692 787 aa28.84■■■□□ 2.21
COL13A1-210ENST00000517713 CLCN6P51797 869 aa28.84■■■□□ 2.21
COL13A1-210ENST00000517713 EPC2Q52LR7 807 aa28.84■■■□□ 2.21
COL13A1-210ENST00000517713 WDR78Q5VTH9 848 aa28.84■■■□□ 2.21
COL13A1-210ENST00000517713 KCNV1Q6PIU1 500 aa28.84■■■□□ 2.21
COL13A1-210ENST00000517713 POMGNT1Q8WZA1 660 aa28.84■■■□□ 2.21
COL13A1-210ENST00000517713 PACSIN1Q9BY11 444 aa28.84■■■□□ 2.21
COL13A1-210ENST00000517713 GPR88Q9GZN0 384 aa28.84■■■□□ 2.21
COL13A1-210ENST00000517713 PMM2O15305 246 aa28.83■■■□□ 2.21
COL13A1-210ENST00000517713 KLRC1P26715 233 aa28.83■■■□□ 2.21
COL13A1-210ENST00000517713 TAS1R3Q7RTX0 852 aa28.83■■■□□ 2.21
COL13A1-210ENST00000517713 AFAP1L1Q8TED9 768 aa28.83■■■□□ 2.21
COL13A1-210ENST00000517713 SLC7A3Q8WY07 619 aa28.83■■■□□ 2.21
COL13A1-210ENST00000517713 CEP89Q96ST8 783 aa28.83■■■□□ 2.21
COL13A1-210ENST00000517713 PORCNQ9H237 461 aa28.83■■■□□ 2.21
COL13A1-210ENST00000517713 DDX41Q9UJV9 622 aaKnown RBP28.83■■■□□ 2.21
COL13A1-210ENST00000517713 SNX12Q9UMY4 172 aa28.83■■■□□ 2.21
COL13A1-210ENST00000517713 HNRNPDLO14979 420 aaKnown RBP28.82■■■□□ 2.2
COL13A1-210ENST00000517713 TCF7P36402 384 aaPredicted RBP28.82■■■□□ 2.2
COL13A1-210ENST00000517713 ERVK-9P63128 1117 aa28.82■■■□□ 2.2
COL13A1-210ENST00000517713 BICD1Q96G01 975 aa28.82■■■□□ 2.2
COL13A1-210ENST00000517713 FBXL18Q96ME1 805 aa28.82■■■□□ 2.2
COL13A1-210ENST00000517713 PARD6BQ9BYG5 372 aa28.82■■■□□ 2.2
COL13A1-210ENST00000517713 ARIH2O95376 493 aa28.82■■■□□ 2.2
COL13A1-210ENST00000517713 GARTP22102 1010 aa28.82■■■□□ 2.2
COL13A1-210ENST00000517713 BMS1Q14692 1282 aaKnown RBP28.82■■■□□ 2.2
COL13A1-210ENST00000517713 ALKBH5Q6P6C2 394 aaKnown RBP28.82■■■□□ 2.2
COL13A1-210ENST00000517713 TMEM117Q9H0C3 514 aa28.82■■■□□ 2.2
COL13A1-210ENST00000517713 PNMA3Q9UL41 463 aa28.82■■■□□ 2.2
COL13A1-210ENST00000517713 CCDC172P0C7W6 258 aa28.81■■■□□ 2.2
COL13A1-210ENST00000517713 PRLRP16471 622 aa28.81■■■□□ 2.2
COL13A1-210ENST00000517713 ARL2P36404 184 aa28.81■■■□□ 2.2
COL13A1-210ENST00000517713 RFC5P40937 340 aa28.81■■■□□ 2.2
COL13A1-210ENST00000517713 MXI1P50539 228 aa28.81■■■□□ 2.2
COL13A1-210ENST00000517713 CKAP4Q07065 602 aaKnown RBP28.81■■■□□ 2.2
COL13A1-210ENST00000517713 ARHGAP44Q17R89 818 aa28.81■■■□□ 2.2
COL13A1-210ENST00000517713 CAPZA3Q96KX2 299 aa28.81■■■□□ 2.2
COL13A1-210ENST00000517713 ZNF408Q9H9D4 720 aa28.81■■■□□ 2.2
COL13A1-210ENST00000517713 NENFQ9UMX5 172 aa28.81■■■□□ 2.2
COL13A1-210ENST00000517713 BTNL10A8MVZ5 291 aa28.81■■■□□ 2.2
COL13A1-210ENST00000517713 TARBP2Q15633 366 aaKnown RBP28.81■■■□□ 2.2
COL13A1-210ENST00000517713 SHCBP1Q8NEM2 672 aa28.81■■■□□ 2.2
COL13A1-210ENST00000517713 ASAP3Q8TDY4 903 aa28.81■■■□□ 2.2
COL13A1-210ENST00000517713 PARD3BQ8TEW8 1205 aa28.81■■■□□ 2.2
COL13A1-210ENST00000517713 MFSD14AQ96MC6 490 aa28.81■■■□□ 2.2
COL13A1-210ENST00000517713 MMS19Q96T76 1030 aa28.81■■■□□ 2.2
COL13A1-210ENST00000517713 UBE2TQ9NPD8 197 aaPredicted RBP28.81■■■□□ 2.2
COL13A1-210ENST00000517713 CYP2C8P10632 490 aa28.8■■■□□ 2.2
COL13A1-210ENST00000517713 GLRA2P23416 452 aa28.8■■■□□ 2.2
COL13A1-210ENST00000517713 NAMPTP43490 491 aa28.8■■■□□ 2.2
COL13A1-210ENST00000517713 TMC2Q8TDI7 906 aa28.8■■■□□ 2.2
COL13A1-210ENST00000517713 VTI1AQ96AJ9 217 aa28.8■■■□□ 2.2
COL13A1-210ENST00000517713 CCDC127Q96BQ5 260 aa28.8■■■□□ 2.2
COL13A1-210ENST00000517713 UNCXA6NJT0 531 aa28.79■■■□□ 2.2
COL13A1-210ENST00000517713 DDX3XO00571 662 aaKnown RBP eCLIP28.79■■■□□ 2.2
COL13A1-210ENST00000517713 ZNF185O15231 689 aa28.79■■■□□ 2.2
COL13A1-210ENST00000517713 SCP2P22307 547 aa28.79■■■□□ 2.2
COL13A1-210ENST00000517713 GPD1LQ8N335 351 aa28.79■■■□□ 2.2
COL13A1-210ENST00000517713 KCNN1Q92952 543 aa28.79■■■□□ 2.2
COL13A1-210ENST00000517713 AZI2Q9H6S1 392 aa28.79■■■□□ 2.2
COL13A1-210ENST00000517713 ANKZF1Q9H8Y5 726 aa28.79■■■□□ 2.2
COL13A1-210ENST00000517713 ZNF446Q9NWS9 450 aa28.79■■■□□ 2.2
COL13A1-210ENST00000517713 USP20Q9Y2K6 914 aa28.79■■■□□ 2.2
COL13A1-210ENST00000517713 ATP8B3O60423 1300 aa28.79■■■□□ 2.2
COL13A1-210ENST00000517713 STRN3Q13033 797 aa28.79■■■□□ 2.2
COL13A1-210ENST00000517713 CELF3Q5SZQ8 465 aaKnown RBP28.79■■■□□ 2.2
COL13A1-210ENST00000517713 ARHGEF19Q8IW93 802 aa28.79■■■□□ 2.2
COL13A1-210ENST00000517713 DEPTORQ8TB45 409 aa28.79■■■□□ 2.2
COL13A1-210ENST00000517713 GTF3C2Q8WUA4 911 aaPredicted RBP28.79■■■□□ 2.2
COL13A1-210ENST00000517713 LRRIQ3A6PVS8 624 aaPredicted RBP28.78■■■□□ 2.2
COL13A1-210ENST00000517713 TULP1O00294 542 aaPredicted RBP28.78■■■□□ 2.2
COL13A1-210ENST00000517713 POTEJP0CG39 1038 aa28.78■■■□□ 2.2
COL13A1-210ENST00000517713 LIG4P49917 911 aa28.78■■■□□ 2.2
COL13A1-210ENST00000517713 CYP24A1Q07973 514 aa28.78■■■□□ 2.2
COL13A1-210ENST00000517713 MAP1SQ66K74 1059 aaPredicted RBP28.78■■■□□ 2.2
COL13A1-210ENST00000517713 MORC4Q8TE76 937 aa28.78■■■□□ 2.2
COL13A1-210ENST00000517713 RPGRIP1Q96KN7 1286 aa28.78■■■□□ 2.2
COL13A1-210ENST00000517713 GPR20Q99678 358 aa28.78■■■□□ 2.2
COL13A1-210ENST00000517713 HYOU1Q9Y4L1 999 aa28.78■■■□□ 2.2
COL13A1-210ENST00000517713 MYH10P35580 1976 aa28.78■■■□□ 2.2
COL13A1-210ENST00000517713 FOXN3O00409 490 aaPredicted RBP28.77■■■□□ 2.2
COL13A1-210ENST00000517713 LRRN2O75325 713 aa28.77■■■□□ 2.2
COL13A1-210ENST00000517713 PALMO75781 387 aa28.77■■■□□ 2.2
COL13A1-210ENST00000517713 MAP2K1Q02750 393 aaPredicted RBP28.77■■■□□ 2.2
COL13A1-210ENST00000517713 KRT39Q6A163 491 aa28.77■■■□□ 2.2
COL13A1-210ENST00000517713 TMCO3Q6UWJ1 677 aa28.77■■■□□ 2.2
COL13A1-210ENST00000517713 USP37Q86T82 979 aa28.77■■■□□ 2.2
COL13A1-210ENST00000517713 NOA1Q8NC60 698 aaKnown RBP28.77■■■□□ 2.2
COL13A1-210ENST00000517713 MSANTD4Q8NCY6 345 aa28.77■■■□□ 2.2
COL13A1-210ENST00000517713 SLC30A5Q8TAD4 765 aa28.77■■■□□ 2.2
COL13A1-210ENST00000517713 CAGE1Q8TC20 777 aa28.77■■■□□ 2.2
COL13A1-210ENST00000517713 TMEM8AQ9HCN3 771 aa28.77■■■□□ 2.2
COL13A1-210ENST00000517713 PCDHGC5Q9Y5F6 944 aa28.77■■■□□ 2.2
COL13A1-210ENST00000517713 LRRIQ4A6NIV6 560 aa28.77■■■□□ 2.2
COL13A1-210ENST00000517713 GRIN3BO60391 1043 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms