RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 MAGED2Q9UNF1 606 aaPredicted RBP11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 STRCQ7RTU9 1775 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 A6NJR5 290 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 IPO5O00410 1097 aaKnown RBP11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 KLRK1P26718 216 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 PMS2P54278 862 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 EN1Q05925 392 aaPredicted RBP11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 CELF4Q9BZC1 486 aaKnown RBP11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 MIS12Q9H081 205 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 SPEF2Q9C093 1822 aa11.61□□□□□ -0.55
PCDHGA1-202ENST00000517417 XIRP1Q702N8 1843 aaKnown RBP11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 PALM3A6NDB9 673 aaPredicted RBP11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 MYCP01106 439 aaPredicted RBP11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 TROVE2P10155 538 aaKnown RBP eCLIP11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 GBP1P32455 592 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 PDIA5Q14554 519 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 LINC00116Q8NCU8 138 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 CCNYQ8ND76 341 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 GABPB2Q8TAK5 448 aaPredicted RBP11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 SYN2Q92777 582 aaPredicted RBP11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 HAUS1Q96CS2 278 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 SHOX2O60902 331 aaPredicted RBP11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 ECEL1O95672 775 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 USP11P51784 963 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 AGBL2Q5U5Z8 902 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 SP8Q8IXZ3 490 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 RUNDC3BQ96NL0 473 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 GDF3Q9NR23 364 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 RNF146Q9NTX7 359 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 MTMR4Q9NYA4 1195 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 SIK3Q9Y2K2 1263 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 AFG3L2Q9Y4W6 797 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 NID2Q14112 1375 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 SLC9A1P19634 815 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 PRELPP51888 382 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 ADCY2Q08462 1091 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 KNOP1Q1ED39 458 aaKnown RBP11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 NBPF9Q3BBW0 867 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 C6orf118Q5T5N4 469 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 XXYLT1Q8NBI6 393 aa11.6□□□□□ -0.55
PCDHGA1-202ENST00000517417 OSBPP22059 807 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 MEI1Q5TIA1 1274 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 ZNF746Q6NUN9 644 aaPredicted RBP11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 CNPY4Q8N129 248 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 ZBTB12Q9Y330 459 aaPredicted RBP11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 ZNF263O14978 683 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 KRT1P04264 644 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 TRIM49P0CI25 452 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 TRIM49CP0CI26 452 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 UCHL3P15374 230 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 ELF1P32519 619 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 TPD52P55327 224 aaPredicted RBP11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 EVX2Q03828 476 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 OR6B2Q6IFH4 312 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 PRPF38AQ8NAV1 312 aaKnown RBP11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 SLC10A4Q96EP9 437 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 FAM193BQ96PV7 902 aaPredicted RBP11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 BEGAINQ9BUH8 593 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 MRPL47Q9HD33 250 aaKnown RBP11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 PJA2O43164 708 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 SLC37A4O43826 429 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 SH3BP5O60239 455 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 PEX19P40855 299 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 BASP1P80723 227 aaKnown RBP11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 NFX1Q12986 1120 aaKnown RBP11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 TRIM68Q6AZZ1 485 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 GLYCTKQ8IVS8 523 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 MDM1Q8TC05 714 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 XPO6Q96QU8 1125 aaKnown RBP11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 FAM213AQ9BRX8 229 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 ANAPC5Q9UJX4 755 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 N4BP2Q86UW6 1770 aaPredicted RBP11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 WDR64B1ANS9 1081 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 GMNNO75496 209 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 CPP00450 1065 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 CHN1P15882 459 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 SWSAP1Q6NVH7 229 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 CYB5D1Q6P9G0 228 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 FBXO33Q7Z6M2 555 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 PASD1Q8IV76 773 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 GDAP1Q8TB36 358 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 SUFUQ9UMX1 484 aa11.59□□□□□ -0.55
PCDHGA1-202ENST00000517417 FLT1P17948 1338 aa11.58□□□□□ -0.55
PCDHGA1-202ENST00000517417 CLDN3O15551 220 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 RASA1P20936 1047 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 HSPA9P38646 679 aaKnown RBP11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 IREB2P48200 963 aaKnown RBP11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 FXR2P51116 673 aaKnown RBP eCLIP11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 PDE1BQ01064 536 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 SLMAPQ14BN4 828 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 DNAAF5Q86Y56 855 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 RAPGEF5Q92565 580 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 TRIM11Q96F44 468 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 HEXIM2Q96MH2 286 aaKnown RBP11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 HEMGNQ9BXL5 484 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 DENND3A2RUS2 1198 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 HIP1RO75146 1068 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 MYO1EQ12965 1108 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 PLCB4Q15147 1175 aa11.58□□□□□ -0.56
PCDHGA1-202ENST00000517417 NUGGCQ68CJ6 796 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms