RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 TTPALQ9BTX7 342 aa4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 EPC1Q9H2F5 836 aa4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 ING3Q9NXR8 418 aa4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 MSRAQ9UJ68 235 aa4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 GRXCR1A8MXD5 290 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 TRIM24O15164 1050 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 TGM5O43548 720 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 STC2O76061 302 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 PFKMP08237 780 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 KRT4P19013 534 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 LSP1P33241 339 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 SCNN1BP51168 640 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 NRG3P56975 720 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 CD69Q07108 199 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 LY6G5CQ5SRR4 150 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 CNNM4Q6P4Q7 775 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 PCSK4Q6UW60 755 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 LMBR1LQ6UX01 489 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 Q6ZPA2 131 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 RHOUQ7L0Q8 258 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 FAM83AQ86UY5 434 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 ZNF610Q8N9Z0 462 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 SMC1BQ8NDV3 1235 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 PIK3C3Q8NEB9 887 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 OR5M3Q8NGP4 307 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 RSAD2Q8WXG1 361 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 ZG16BQ96DA0 208 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 FAM193BQ96PV7 902 aaPredicted RBP4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 AGAP2Q99490 1192 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 CPPED1Q9BRF8 314 aaPredicted RBP4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 ENKD1Q9H0I2 346 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 WNT8AQ9H1J5 351 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 USP18Q9UMW8 372 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 FZD1Q9UP38 647 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 HDAC5Q9UQL6 1122 aa4.29□□□□□ -1.72
RNU4-49P-201ENST00000516080 FAM83GA6ND36 823 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 DNAJC6O75061 913 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 SEC24DO94855 1032 aaPredicted RBP4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 RHOBTB3O94955 611 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 LY86O95711 162 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 ITGB1P05556 798 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 GYPEP15421 78 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 HK1P19367 917 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 NANOS3P60323 173 aaKnown RBP4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 MRPL49Q13405 166 aaKnown RBP4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 PTPAQ15257 358 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 C21orf62-AS1Q17RA5 79 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 FAM214AQ32MH5 1076 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 IQSEC1Q6DN90 963 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 TAS1R1Q7RTX1 841 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 C11orf74Q86VG3 221 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 DNAJC10Q8IXB1 793 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 NIM1KQ8IY84 436 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 RPUSD2Q8IZ73 545 aaKnown RBP4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 OR52N2Q8NGI0 321 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 CPT1CQ8TCG5 803 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 GAB3Q8WWW8 586 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 IL17RAQ96F46 866 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 PIF1Q9H611 641 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 FANCLQ9NW38 375 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 KCNG1Q9UIX4 513 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 SORCS3Q9UPU3 1222 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 CLCA2Q9UQC9 943 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 PLAAQ9Y263 795 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 NUMBLQ9Y6R0 609 aa4.28□□□□□ -1.72
RNU4-49P-201ENST00000516080 SCAF4O95104 1147 aaKnown RBP4.27□□□□□ -1.73
RNU4-49P-201ENST00000516080 ABHD16AO95870 558 aa4.27□□□□□ -1.73
RNU4-49P-201ENST00000516080 CASRP41180 1078 aa4.27□□□□□ -1.73
RNU4-49P-201ENST00000516080 LSSP48449 732 aa4.27□□□□□ -1.73
RNU4-49P-201ENST00000516080 GZMKP49863 264 aa4.27□□□□□ -1.73
RNU4-49P-201ENST00000516080 DUSP2Q05923 314 aa4.27□□□□□ -1.73
RNU4-49P-201ENST00000516080 TKFCQ3LXA3 575 aa4.27□□□□□ -1.73
RNU4-49P-201ENST00000516080 ZBTB41Q5SVQ8 909 aa4.27□□□□□ -1.73
RNU4-49P-201ENST00000516080 FRMD7Q6ZUT3 714 aa4.27□□□□□ -1.73
RNU4-49P-201ENST00000516080 DOK3Q7L591 496 aa4.27□□□□□ -1.73
RNU4-49P-201ENST00000516080 ZNF575Q86XF7 245 aa4.27□□□□□ -1.73
RNU4-49P-201ENST00000516080 GLB1L2Q8IW92 636 aa4.27□□□□□ -1.73
RNU4-49P-201ENST00000516080 OR2W6PQ8NHA6 318 aa4.27□□□□□ -1.73
RNU4-49P-201ENST00000516080 PROKR1Q8TCW9 393 aa4.27□□□□□ -1.73
RNU4-49P-201ENST00000516080 GPR101Q96P66 508 aaPredicted RBP4.27□□□□□ -1.73
RNU4-49P-201ENST00000516080 EIF2B4Q9UI10 523 aaKnown RBP4.27□□□□□ -1.73
RNU4-49P-201ENST00000516080 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNU4-49P-201ENST00000516080 A0A1W2PR48 441 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 PRSS38A1L453 326 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 RAB11FIP3O75154 756 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 GCP02774 474 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 IL2P60568 153 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 FSTL1Q12841 308 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 PCBP1Q15365 356 aaKnown RBP eCLIP4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 TERF2Q15554 542 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 VPS72Q15906 364 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 TIGD2Q4W5G0 525 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 PLEKHG4Q58EX7 1191 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 MBNL2Q5VZF2 373 aaKnown RBP4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 KCNV1Q6PIU1 500 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 LRRC55Q6ZSA7 311 aa4.26□□□□□ -1.73
RNU4-49P-201ENST00000516080 CXorf67Q86X51 503 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms