RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 KANSL2Q9H9L4 492 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 ZNF185O15231 689 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 SEC24DO94855 1032 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-214ENST00000515035 SASH1O94885 1247 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 NR3C1P04150 777 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 KRT8P05787 483 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 PAPOLAP51003 745 aaKnown RBP14.12□□□□□ -0.15
TCOF1-214ENST00000515035 GJD4Q96KN9 370 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-214ENST00000515035 OLA1Q9NTK5 396 aaKnown RBP14.12□□□□□ -0.15
TCOF1-214ENST00000515035 CPSF3Q9UKF6 684 aaKnown RBP14.12□□□□□ -0.15
TCOF1-214ENST00000515035 TSC22D4Q9Y3Q8 395 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 SFI1A8K8P3 1242 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 RAD17O75943 681 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 HLA-DPA1P20036 260 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 CYLC2Q14093 348 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-214ENST00000515035 FAM47CQ5HY64 1035 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 IZUMO3Q5VZ72 239 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 PAWRQ96IZ0 340 aaKnown RBP14.12□□□□□ -0.15
TCOF1-214ENST00000515035 HEXIM2Q96MH2 286 aaKnown RBP14.12□□□□□ -0.15
TCOF1-214ENST00000515035 XPO6Q96QU8 1125 aaKnown RBP14.12□□□□□ -0.15
TCOF1-214ENST00000515035 SLC40A1Q9NP59 571 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 STAT4Q14765 748 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 CCDC85BQ15834 202 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-214ENST00000515035 ZC3H12BQ5HYM0 836 aaKnown RBP14.12□□□□□ -0.15
TCOF1-214ENST00000515035 TRPM8Q7Z2W7 1104 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 SIX6OS1Q8N1H7 587 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 TMEM35BQ8NCS4 154 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 RPS6KC1Q96S38 1066 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 C11orf70Q9BRQ4 267 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 NUP85Q9BW27 656 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 ALG13Q9NP73 1137 aaKnown RBP14.12□□□□□ -0.15
TCOF1-214ENST00000515035 SERPINB13Q9UIV8 391 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 HEY1Q9Y5J3 304 aa14.12□□□□□ -0.15
TCOF1-214ENST00000515035 PVALEFA0A1B0GWK0 134 aa14.11□□□□□ -0.15
TCOF1-214ENST00000515035 PTPN12Q05209 780 aaKnown RBP14.11□□□□□ -0.15
TCOF1-214ENST00000515035 TBC1D9BQ66K14 1250 aa14.11□□□□□ -0.15
TCOF1-214ENST00000515035 ARL8AQ96BM9 186 aa14.11□□□□□ -0.15
TCOF1-214ENST00000515035 ALKQ9UM73 1620 aa14.11□□□□□ -0.15
TCOF1-214ENST00000515035 H0Y626 953 aa14.11□□□□□ -0.15
TCOF1-214ENST00000515035 TRIM16O95361 564 aa14.11□□□□□ -0.15
TCOF1-214ENST00000515035 ENO1P06733 434 aaKnown RBP14.11□□□□□ -0.15
TCOF1-214ENST00000515035 CTTNQ14247 550 aaKnown RBP14.11□□□□□ -0.15
TCOF1-214ENST00000515035 SPOUT1Q5T280 376 aaKnown RBP14.11□□□□□ -0.15
TCOF1-214ENST00000515035 TMCO5AQ8N6Q1 288 aa14.11□□□□□ -0.15
TCOF1-214ENST00000515035 TRABDQ9H4I3 376 aa14.11□□□□□ -0.15
TCOF1-214ENST00000515035 DLGAP2Q9P1A6 1054 aa14.11□□□□□ -0.15
TCOF1-214ENST00000515035 KLHL8Q9P2G9 620 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-214ENST00000515035 CYP2D7A0A087X1C5 515 aa14.11□□□□□ -0.15
TCOF1-214ENST00000515035 LRRC8EQ6NSJ5 796 aa14.11□□□□□ -0.15
TCOF1-214ENST00000515035 LRIG3Q6UXM1 1119 aa14.11□□□□□ -0.15
TCOF1-214ENST00000515035 ZBTB33Q86T24 672 aa14.11□□□□□ -0.15
TCOF1-214ENST00000515035 GFAPP14136 432 aa14.11□□□□□ -0.15
TCOF1-214ENST00000515035 PAMP19021 973 aa14.11□□□□□ -0.15
TCOF1-214ENST00000515035 IL10P22301 178 aa14.11□□□□□ -0.15
TCOF1-214ENST00000515035 XPAP23025 273 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-214ENST00000515035 GCLMP48507 274 aa14.11□□□□□ -0.15
TCOF1-214ENST00000515035 ERP27Q96DN0 273 aa14.11□□□□□ -0.15
TCOF1-214ENST00000515035 RNPC3Q96LT9 517 aaKnown RBP14.11□□□□□ -0.15
TCOF1-214ENST00000515035 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.11□□□□□ -0.15
TCOF1-214ENST00000515035 CPSF1Q10570 1443 aaKnown RBP14.11□□□□□ -0.15
TCOF1-214ENST00000515035 FTLP02792 175 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-214ENST00000515035 SEC24CP53992 1094 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 OSTNP61366 133 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 C1orf54Q8WWF1 131 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 KIF9Q9HAQ2 790 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 H7C1W4 665 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 SMARCA1P28370 1054 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 SFR1Q86XK3 245 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 KIF2BQ8N4N8 673 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 RFFLQ8WZ73 363 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 STK36Q9NRP7 1315 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 TULP4Q9NRJ4 1543 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 POTEMA6NI47 508 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 DNAL1Q4LDG9 190 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 ZNF394Q53GI3 561 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 ZNF746Q6NUN9 644 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-214ENST00000515035 PASD1Q8IV76 773 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 HIC2Q96JB3 615 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 WNT8AQ9H1J5 351 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 CHCHD3Q9NX63 227 aaKnown RBP14.1□□□□□ -0.15
TCOF1-214ENST00000515035 RNF17Q9BXT8 1623 aaKnown RBP14.1□□□□□ -0.15
TCOF1-214ENST00000515035 ANP32DO95626 131 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 GGPS1O95749 300 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 NT5C2P49902 561 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 ALDH18A1P54886 795 aaKnown RBP14.1□□□□□ -0.15
TCOF1-214ENST00000515035 PRAMEP78395 509 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 CYP26B1Q9NR63 512 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 ABCF3Q9NUQ8 709 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 SLC12A6Q9UHW9 1150 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 BCORL1Q5H9F3 1711 aa14.1□□□□□ -0.15
TCOF1-214ENST00000515035 IREB2P48200 963 aaKnown RBP14.09□□□□□ -0.15
TCOF1-214ENST00000515035 POU5F1BQ06416 359 aa14.09□□□□□ -0.15
TCOF1-214ENST00000515035 DRAP1Q14919 205 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-214ENST00000515035 MTERF2Q49AM1 385 aa14.09□□□□□ -0.15
TCOF1-214ENST00000515035 GLYCTKQ8IVS8 523 aa14.09□□□□□ -0.15
TCOF1-214ENST00000515035 FAM193BQ96PV7 902 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-214ENST00000515035 PKD2L2Q9NZM6 624 aa14.09□□□□□ -0.15
TCOF1-214ENST00000515035 KIF17Q9P2E2 1029 aa14.09□□□□□ -0.15
TCOF1-214ENST00000515035 PI4KBQ9UBF8 816 aa14.09□□□□□ -0.15
TCOF1-214ENST00000515035 SMG5Q9UPR3 1016 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms